Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 1-397 |
| Cow position: | chr19:28800329-28799933 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 262 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 67 |
| Conread position: | 1-397 |
| Cow position: | chr19:31396095-31395691 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 41, 175 |
| Conread position: | 1-511 |
| Cow position: | chr19:20699885-20700400 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 1-515 |
| Cow position: | chr19:36478692-36479201 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 353 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 1-619 |
| Cow position: | chr19:30052204-30051588 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 320 |
| Conread position: | 4-622 |
| Cow position: | chr19:3081896-3082498 (view UCSC Genome Browser custom track) |
| Alignm length: | 632 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 80-397 |
| Cow position: | chr19:3585346-3585022 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 9, 147 |
| Conread position: | 80-412 |
| Cow position: | chr19:19241979-19242315 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 19, 121 |
| Conread position: | 93-355 |
| Cow position: | chr19:30452873-30452603 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 76 |
| Conread position: | 94-424 |
| Cow position: | chr19:4609757-4610098 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 94-586 |
| Cow position: | chr19:14534749-14534285 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 94-621 |
| Cow position: | chr19:30746301-30746835 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 356 |
| Conread position: | 163-581 |
| Cow position: | chr19:426304-425895 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 96, 226 |
| Conread position: | 178-370 |
| Cow position: | chr19:38396081-38395882 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 190-570 |
| Cow position: | chr19:33285311-33284924 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 241 |
| Conread position: | 302-622 |
| Cow position: | chr19:30350110-30349807 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 78 |
| Conread position: | 302-624 |
| Cow position: | chr19:17439973-17439670 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 91, 64 |
| Conread position: | 304-403 |
| Cow position: | chr19:13633303-13633203 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 305-620 |
| Cow position: | chr19:25846443-25846732 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 246, 79 |
| Conread position: | 330-532 |
| Cow position: | chr19:35873836-35873633 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 342-543 |
| Cow position: | chr19:30452382-30452194 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 386-622 |
| Cow position: | chr19:30188596-30188365 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 164, 52 |
| Conread position: | 391-625 |
| Cow position: | chr19:51070679-51070459 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 199, 46 |
| Conread position: | 394-621 |
| Cow position: | chr19:49483955-49484174 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 155, 44 |
| Conread position: | 395-622 |
| Cow position: | chr19:28560618-28560397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 61, 44 |
| Conread position: | 397-622 |
| Cow position: | chr19:22670648-22670439 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 460-624 |
| Cow position: | chr19:19242333-19242499 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 464-622 |
| Cow position: | chr19:4600772-4600929 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 480-620 |
| Cow position: | chr19:28606076-28605934 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 507-620 |
| Cow position: | chr19:41504271-41504388 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.