Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 1-455 |
| Cow position: | chr2:27145556-27145079 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 317 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 166 |
| Conread position: | 1-619 |
| Cow position: | chr2:72598612-72599241 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 63 |
| Conread position: | 1-620 |
| Cow position: | chr2:63288343-63287713 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 93 |
| Conread position: | 1-627 |
| Cow position: | chr2:62674430-62673815 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 2-257 |
| Cow position: | chr2:14465752-14465488 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 32, 185 |
| Conread position: | 4-396 |
| Cow position: | chr2:50379412-50379824 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 29, 138 |
| Conread position: | 5-626 |
| Cow position: | chr2:32393225-32393830 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 181 |
| Conread position: | 71-622 |
| Cow position: | chr2:33791599-33791047 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 308 |
| Conread position: | 80-338 |
| Cow position: | chr2:54890211-54890471 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 223 |
| Conread position: | 80-448 |
| Cow position: | chr2:31419901-31420287 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 30, 67 |
| Conread position: | 80-622 |
| Cow position: | chr2:74388226-74387697 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 32 |
| Conread position: | 82-621 |
| Cow position: | chr2:53717091-53716550 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 374 |
| Conread position: | 87-560 |
| Cow position: | chr2:18249991-18249508 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 90-384 |
| Cow position: | chr2:39508368-39508675 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 69, 161 |
| Conread position: | 92-393 |
| Cow position: | chr2:35304667-35304973 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 249 |
| Conread position: | 93-393 |
| Cow position: | chr2:46141260-46140958 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 93-413 |
| Cow position: | chr2:20301864-20302176 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 93-605 |
| Cow position: | chr2:77968591-77968094 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 24 |
| Conread position: | 94-343 |
| Cow position: | chr2:19749513-19749770 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 102-625 |
| Cow position: | chr2:21697819-21697280 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 122-624 |
| Cow position: | chr2:43345359-43344854 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 333 |
| Conread position: | 140-408 |
| Cow position: | chr2:6292584-6292859 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 142-605 |
| Cow position: | chr2:71120981-71121442 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 145-385 |
| Cow position: | chr2:69982377-69982619 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 147-593 |
| Cow position: | chr2:64073510-64073966 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 30 |
| Conread position: | 150-620 |
| Cow position: | chr2:41490609-41491074 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 128 |
| Conread position: | 157-379 |
| Cow position: | chr2:85055968-85056198 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 102, 28 |
| Conread position: | 182-448 |
| Cow position: | chr2:76055561-76055284 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 74, 256 |
| Conread position: | 190-391 |
| Cow position: | chr2:66435288-66435492 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 258-620 |
| Cow position: | chr2:7211870-7212230 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 44, 165 |
| Conread position: | 268-625 |
| Cow position: | chr2:39196689-39196334 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 9, 175 |
| Conread position: | 304-623 |
| Cow position: | chr2:7779370-7779039 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 105, 29 |
| Conread position: | 313-622 |
| Cow position: | chr2:47746359-47746656 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 86, 49 |
| Conread position: | 323-575 |
| Cow position: | chr2:24884136-24884382 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 71, 18 |
| Conread position: | 341-597 |
| Cow position: | chr2:37003459-37003707 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 207, 96 |
| Conread position: | 389-620 |
| Cow position: | chr2:4830608-4830384 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 390-622 |
| Cow position: | chr2:9043408-9043632 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 54 |
| Conread position: | 391-623 |
| Cow position: | chr2:42286283-42286061 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 162, 45 |
| Conread position: | 391-624 |
| Cow position: | chr2:20281700-20281932 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 439-624 |
| Cow position: | chr2:3628222-3628038 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 460-614 |
| Cow position: | chr2:3544325-3544173 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 484-624 |
| Cow position: | chr2:13684892-13685033 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 102 |
| Conread position: | 484-627 |
| Cow position: | chr2:52347478-52347331 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.