Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 1-447 |
| Cow position: | chr21:24945023-24944553 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 82 |
| Conread position: | 1-529 |
| Cow position: | chr21:37282180-37282693 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 106 |
| Conread position: | 1-627 |
| Cow position: | chr21:5597017-5597641 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 4-243 |
| Cow position: | chr21:16981754-16981994 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 80 |
| Conread position: | 5-343 |
| Cow position: | chr21:37941808-37941457 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 17-551 |
| Cow position: | chr21:16166738-16166210 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 43 |
| Conread position: | 42-252 |
| Cow position: | chr21:34141265-34141056 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 76-272 |
| Cow position: | chr21:26614711-26614512 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 80-397 |
| Cow position: | chr21:37886367-37886688 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 61, 78 |
| Conread position: | 90-624 |
| Cow position: | chr21:1991252-1991783 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 69 |
| Conread position: | 93-622 |
| Cow position: | chr21:45447560-45448083 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 65 |
| Conread position: | 94-389 |
| Cow position: | chr21:30897385-30897684 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 94-421 |
| Cow position: | chr21:33292681-33293020 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 319 |
| Conread position: | 94-548 |
| Cow position: | chr21:39765813-39766256 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 110 |
| Conread position: | 114-615 |
| Cow position: | chr21:37355663-37356155 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 230 |
| Conread position: | 142-389 |
| Cow position: | chr21:9040888-9041140 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 123, 14 |
| Conread position: | 142-586 |
| Cow position: | chr21:8273545-8273078 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 106, 19 |
| Conread position: | 150-624 |
| Cow position: | chr21:25018893-25019361 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 151-622 |
| Cow position: | chr21:15543921-15543453 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 163-412 |
| Cow position: | chr21:41041452-41041693 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 103, 120 |
| Conread position: | 164-619 |
| Cow position: | chr21:24972565-24972115 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 249 |
| Conread position: | 167-624 |
| Cow position: | chr21:23398999-23399465 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 20 |
| Conread position: | 170-364 |
| Cow position: | chr21:17672286-17672094 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 60 |
| Conread position: | 192-511 |
| Cow position: | chr21:33974561-33974887 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 141 |
| Conread position: | 210-621 |
| Cow position: | chr21:26632357-26631971 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 313-581 |
| Cow position: | chr21:40442417-40442144 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 135, 52 |
| Conread position: | 340-620 |
| Cow position: | chr21:39075269-39074986 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 108, 75 |
| Conread position: | 359-622 |
| Cow position: | chr21:22941621-22941870 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 76 |
| Conread position: | 362-621 |
| Cow position: | chr21:45962639-45962892 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 482-621 |
| Cow position: | chr21:30793918-30793770 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 490-616 |
| Cow position: | chr21:29643998-29643871 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 57, 101 |
Show alignments to all cow chromosomes.