Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 1-397 |
| Cow position: | chr24:25229275-25228883 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 29, 168 |
| Conread position: | 10-330 |
| Cow position: | chr24:30900436-30900103 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 73-623 |
| Cow position: | chr24:17763404-17762856 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 80-389 |
| Cow position: | chr24:16476584-16476901 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 80-621 |
| Cow position: | chr24:41405452-41404924 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 248 |
| Conread position: | 80-622 |
| Cow position: | chr24:6177266-6177815 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 34 |
| Conread position: | 80-622 |
| Cow position: | chr24:37386482-37385957 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 91 |
| Conread position: | 92-624 |
| Cow position: | chr24:25245923-25246449 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 9 |
| Conread position: | 93-614 |
| Cow position: | chr24:14913669-14913172 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 94-323 |
| Cow position: | chr24:35836360-35836127 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 94-622 |
| Cow position: | chr24:38643514-38644036 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 67 |
| Conread position: | 96-390 |
| Cow position: | chr24:28440475-28440779 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 111-623 |
| Cow position: | chr24:42817163-42817675 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 19 |
| Conread position: | 112-397 |
| Cow position: | chr24:19644570-19644860 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 112-449 |
| Cow position: | chr24:19627229-19627580 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 130-397 |
| Cow position: | chr24:6665525-6665248 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 142-390 |
| Cow position: | chr24:39607639-39607395 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 15 |
| Conread position: | 142-434 |
| Cow position: | chr24:26846325-26846024 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 119, 27 |
| Conread position: | 146-567 |
| Cow position: | chr24:7038699-7039114 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 30 |
| Conread position: | 166-623 |
| Cow position: | chr24:43351143-43350686 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 285 |
| Conread position: | 167-623 |
| Cow position: | chr24:36853278-36853762 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 380 |
| Conread position: | 190-418 |
| Cow position: | chr24:43492525-43492289 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 193-622 |
| Cow position: | chr24:19961528-19961105 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 215-591 |
| Cow position: | chr24:25343064-25343440 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 254-620 |
| Cow position: | chr24:6424004-6423653 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 5 |
| Conread position: | 269-448 |
| Cow position: | chr24:31301596-31301409 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 302-532 |
| Cow position: | chr24:25934504-25934722 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 307-621 |
| Cow position: | chr24:9867372-9867066 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 71, 137 |
| Conread position: | 313-509 |
| Cow position: | chr24:1296947-1296758 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 106 |
| Conread position: | 313-571 |
| Cow position: | chr24:36551246-36550997 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 49 |
| Conread position: | 313-622 |
| Cow position: | chr24:35835908-35835626 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 316-622 |
| Cow position: | chr24:32579293-32579592 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 76, 9 |
| Conread position: | 341-622 |
| Cow position: | chr24:15474831-15475100 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 215, 54 |
| Conread position: | 344-622 |
| Cow position: | chr24:17417219-17417497 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 43, 149 |
| Conread position: | 439-618 |
| Cow position: | chr24:36097696-36097876 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 108, 21 |
| Conread position: | 451-621 |
| Cow position: | chr24:21714962-21714790 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 19 |
Show alignments to all cow chromosomes.