Cow genome map
| Conread name: | Mixn-0035n12 |
| Conread position: | 4-421 |
| Cow position: | chr8:32719799-32720210 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 5-620 |
| Cow position: | chr8:7104581-7103976 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 157 |
| Conread position: | 5-622 |
| Cow position: | chr8:45686607-45686021 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 38 |
| Conread position: | 73-536 |
| Cow position: | chr8:11792093-11792569 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 73-574 |
| Cow position: | chr8:21078432-21078927 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 79-319 |
| Cow position: | chr8:24517545-24517296 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 80-475 |
| Cow position: | chr8:27368995-27369393 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 81-623 |
| Cow position: | chr8:40432960-40432426 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 91-353 |
| Cow position: | chr8:12790929-12790663 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 92-622 |
| Cow position: | chr8:4337157-4336619 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 93-348 |
| Cow position: | chr8:41951515-41951776 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 41, 65 |
| Conread position: | 93-624 |
| Cow position: | chr8:30022002-30021484 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 94-272 |
| Cow position: | chr8:6409660-6409480 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 70 |
| Conread position: | 94-407 |
| Cow position: | chr8:44857374-44857702 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 33, 312 |
| Conread position: | 94-418 |
| Cow position: | chr8:32326584-32326907 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 76, 29 |
| Conread position: | 94-445 |
| Cow position: | chr8:8481038-8480667 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 47, 271 |
| Conread position: | 94-621 |
| Cow position: | chr8:19369565-19369066 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 94-622 |
| Cow position: | chr8:2974568-2975108 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 96-626 |
| Cow position: | chr8:54158647-54159180 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 329 |
| Conread position: | 115-455 |
| Cow position: | chr8:31886679-31887015 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 116-623 |
| Cow position: | chr8:33437726-33438227 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 256 |
| Conread position: | 145-621 |
| Cow position: | chr8:48682526-48682056 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 49 |
| Conread position: | 149-388 |
| Cow position: | chr8:62093027-62092795 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 149-388 |
| Cow position: | chr8:62113583-62113815 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 164-398 |
| Cow position: | chr8:9985578-9985809 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 141, 105 |
| Conread position: | 165-622 |
| Cow position: | chr8:23441147-23440669 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 344 |
| Conread position: | 170-423 |
| Cow position: | chr8:59137905-59137651 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 91, 40 |
| Conread position: | 170-485 |
| Cow position: | chr8:21119282-21118958 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 279 |
| Conread position: | 183-620 |
| Cow position: | chr8:22103193-22102754 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 112 |
| Conread position: | 189-389 |
| Cow position: | chr8:49384580-49384786 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 106 |
| Conread position: | 190-435 |
| Cow position: | chr8:19772508-19772760 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 69, 98 |
| Conread position: | 289-621 |
| Cow position: | chr8:5874267-5874581 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 110 |
| Conread position: | 295-592 |
| Cow position: | chr8:18725334-18725626 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 74 |
| Conread position: | 308-595 |
| Cow position: | chr8:20341575-20341302 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 313-625 |
| Cow position: | chr8:40273501-40273198 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 80 |
| Conread position: | 349-622 |
| Cow position: | chr8:53891690-53891971 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 44, 123 |
| Conread position: | 391-618 |
| Cow position: | chr8:51633987-51633763 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 46 |
| Conread position: | 391-621 |
| Cow position: | chr8:21945644-21945868 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 400-564 |
| Cow position: | chr8:9985956-9986108 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 405-624 |
| Cow position: | chr8:14617669-14617452 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 45 |
| Conread position: | 431-616 |
| Cow position: | chr8:18801485-18801672 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 119, 52 |
| Conread position: | 446-621 |
| Cow position: | chr8:18883089-18883263 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 105, 10 |
Show alignments to all cow chromosomes.