Cow genome map


           Conread name:
           Mixn-0036c18
        

               Conread position:
               1-157
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 92
               

               Conread position:
               1-228
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 109
               

               Conread position:
               1-248
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               45, 23
               

               Conread position:
               1-250
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               96, 112
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               93, 20
               

               Conread position:
               1-306
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 113
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               1-311
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 156
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               227
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               1-315
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               23, 37
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 67
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               1-323
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 106
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               23, 212
               

               Conread position:
               1-325
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 73
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 118
               

               Conread position:
               1-332
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               23, 100
               

               Conread position:
               2-200
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               2-225
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 189
               

               Conread position:
               2-310
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               2-314
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               2-319
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               2-323
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               2-328
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 22
               

               Conread position:
               2-331
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               3-291
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               24, 92
               

               Conread position:
               3-314
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               21, 137
               

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 150
               

               Conread position:
               3-332
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               10-298
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               12-317
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               21-294
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               25, 92
               

               Conread position:
               23-310
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               29-314
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               30-310
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               32-314
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               34-317
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               34-329
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               11, 68
               

               Conread position:
               37-280
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               29, 121
               

               Conread position:
               39-326
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               58, 88
               

               Conread position:
               43-274
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 81
               

               Conread position:
               43-326
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 55
               

               Conread position:
               44-285
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               47-208
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               54-332
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               247, 102
               

               Conread position:
               62-237
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               27, 51
               

               Conread position:
               63-324
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               34, 59
               

               Conread position:
               64-280
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               84-310
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               159, 9
               

               Conread position:
               85-314
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               150, 14
               

               Conread position:
               95-286
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               99-313
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               28, 50
               

               Conread position:
               99-314
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               51, 141
               

               Conread position:
               99-317
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               99-331
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               213, 60
               

               Conread position:
               105-284
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               105-313
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               106-332
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               206, 34
               

               Conread position:
               107-330
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               109-325
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               109-331
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               37, 49
               

               Conread position:
               112-310
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               163
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               113-329
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               114-314
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               89, 45
               

               Conread position:
               115-332
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               130-250
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               135-320
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               180, 27
               

               Conread position:
               140-316
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 10
               

               Conread position:
               143-306
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               143-323
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               151-321
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               161, 15
               

               Conread position:
               158-320
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               159-314
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               166-328
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               168-311
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               29, 141
               

               Conread position:
               168-331
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 92
               

               Conread position:
               171-326
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 139
               

               Conread position:
               172-304
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-306
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               172-321
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               172-327
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               142, 53
               

               Conread position:
               174-315
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 104
               

               Conread position:
               178-325
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               178-325
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               182-314
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               182-315
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               183-331
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               184-321
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               185-314
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               190-315
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               190-323
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               192-329
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               202-327
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               208-325
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               211-314
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 0
               
Show alignments to all cow chromosomes.