Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-162 |
| Cow position: | chr10:38472470-38472631 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 1-230 |
| Cow position: | chr10:68979799-68980012 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 1-272 |
| Cow position: | chr10:15824276-15824002 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 1-310 |
| Cow position: | chr10:22455446-22455751 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 1-314 |
| Cow position: | chr10:23879901-23879589 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 155 |
| Conread position: | 1-318 |
| Cow position: | chr10:19128544-19128218 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 1-324 |
| Cow position: | chr10:11275923-11276246 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 169 |
| Conread position: | 1-324 |
| Cow position: | chr10:17745378-17745683 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 1-324 |
| Cow position: | chr10:37428420-37428106 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 1-332 |
| Cow position: | chr10:12199267-12199608 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 2-307 |
| Cow position: | chr10:28508975-28508672 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 2-314 |
| Cow position: | chr10:50141258-50140950 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 2-320 |
| Cow position: | chr10:43060836-43060519 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 2-323 |
| Cow position: | chr10:18863132-18863447 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 2-330 |
| Cow position: | chr10:3854998-3855313 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 3-186 |
| Cow position: | chr10:27223029-27223215 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 3-314 |
| Cow position: | chr10:767525-767222 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 61 |
| Conread position: | 3-326 |
| Cow position: | chr10:47583955-47584269 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 3-329 |
| Cow position: | chr10:68203833-68203502 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 8-327 |
| Cow position: | chr10:35181956-35182274 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 8-331 |
| Cow position: | chr10:3318139-3318465 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 115 |
| Conread position: | 12-318 |
| Cow position: | chr10:15618168-15617873 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 13-323 |
| Cow position: | chr10:2711470-2711159 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 19-323 |
| Cow position: | chr10:16669071-16668764 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 137 |
| Conread position: | 25-323 |
| Cow position: | chr10:24609062-24609365 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 33-320 |
| Cow position: | chr10:21477272-21477551 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 33-332 |
| Cow position: | chr10:52131858-52132149 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 36-234 |
| Cow position: | chr10:37092795-37092595 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 69 |
| Conread position: | 37-322 |
| Cow position: | chr10:41638087-41638368 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 111, 74 |
| Conread position: | 38-330 |
| Cow position: | chr10:37665292-37664999 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 39-248 |
| Cow position: | chr10:48193397-48193192 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 20 |
| Conread position: | 48-310 |
| Cow position: | chr10:5422076-5421812 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 51-321 |
| Cow position: | chr10:67051201-67051464 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 55-304 |
| Cow position: | chr10:63621559-63621313 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 64-319 |
| Cow position: | chr10:21563310-21563575 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 73-276 |
| Cow position: | chr10:54342972-54342770 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 24, 51 |
| Conread position: | 95-320 |
| Cow position: | chr10:55874097-55874319 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 217, 17 |
| Conread position: | 99-328 |
| Cow position: | chr10:48208291-48208076 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 100-263 |
| Cow position: | chr10:49280156-49279995 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 101-320 |
| Cow position: | chr10:4013648-4013856 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 105-303 |
| Cow position: | chr10:60243983-60244174 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 106-289 |
| Cow position: | chr10:31220528-31220708 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 107-328 |
| Cow position: | chr10:29487239-29487442 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 110-320 |
| Cow position: | chr10:62629705-62629904 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 112-332 |
| Cow position: | chr10:45195736-45195953 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 46, 5 |
| Conread position: | 114-328 |
| Cow position: | chr10:25536403-25536616 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 53, 43 |
| Conread position: | 125-314 |
| Cow position: | chr10:30320801-30320980 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 126-332 |
| Cow position: | chr10:4605565-4605359 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 152, 10 |
| Conread position: | 134-305 |
| Cow position: | chr10:25008811-25008646 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 157-313 |
| Cow position: | chr10:30708726-30708571 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 127 |
| Conread position: | 158-314 |
| Cow position: | chr10:33995584-33995426 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 171-332 |
| Cow position: | chr10:30358052-30357891 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-315 |
| Cow position: | chr10:50964150-50964295 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 172-318 |
| Cow position: | chr10:57503825-57503973 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 173-321 |
| Cow position: | chr10:57993791-57993645 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 16 |
| Conread position: | 178-321 |
| Cow position: | chr10:881919-882061 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 179-324 |
| Cow position: | chr10:4626838-4626985 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 182-328 |
| Cow position: | chr10:46010276-46010130 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-319 |
| Cow position: | chr10:29291330-29291468 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 185-328 |
| Cow position: | chr10:7094251-7094388 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 190-306 |
| Cow position: | chr10:27224174-27224287 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 193-320 |
| Cow position: | chr10:45651173-45651300 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 197-304 |
| Cow position: | chr10:53374853-53374746 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.