Cow genome map
Conread name: | Mixn-0036c18 |
Conread position: | 1-250 |
Cow position: | chr11:77756491-77756241 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 174 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 23, 81 |
Conread position: | 1-256 |
Cow position: | chr11:35251720-35251474 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 195 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 21, 32 |
Conread position: | 1-284 |
Cow position: | chr11:10877518-10877802 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 212 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 23, 149 |
Conread position: | 1-292 |
Cow position: | chr11:58793739-58793449 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 85 |
Conread position: | 1-298 |
Cow position: | chr11:12791040-12791327 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 218 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 23, 141 |
Conread position: | 1-310 |
Cow position: | chr11:25972666-25972370 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 231 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 23, 91 |
Conread position: | 1-311 |
Cow position: | chr11:34397748-34398056 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 67 |
Conread position: | 1-314 |
Cow position: | chr11:77763234-77762942 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 223 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 25, 45 |
Conread position: | 1-323 |
Cow position: | chr11:18153980-18153667 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 235 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 23, 32 |
Conread position: | 1-324 |
Cow position: | chr11:57753115-57752789 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 234 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 25, 157 |
Conread position: | 1-327 |
Cow position: | chr11:82529133-82529469 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 42 |
Conread position: | 1-328 |
Cow position: | chr11:12064975-12065287 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 233 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 25, 97 |
Conread position: | 1-331 |
Cow position: | chr11:55119736-55120064 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 160 |
Conread position: | 1-332 |
Cow position: | chr11:15885563-15885893 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 101 |
Conread position: | 1-332 |
Cow position: | chr11:18452877-18452558 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 119 |
Conread position: | 2-235 |
Cow position: | chr11:12141014-12141234 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 24, 29 |
Conread position: | 2-256 |
Cow position: | chr11:57062139-57062383 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 193 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 82, 58 |
Conread position: | 2-314 |
Cow position: | chr11:17737583-17737895 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 213 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 21, 136 |
Conread position: | 2-314 |
Cow position: | chr11:24008366-24008673 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 220 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 22, 14 |
Conread position: | 2-330 |
Cow position: | chr11:22851306-22851635 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 167 |
Conread position: | 3-216 |
Cow position: | chr11:25856461-25856672 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 156 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 19, 153 |
Conread position: | 3-303 |
Cow position: | chr11:77772423-77772132 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 221 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 21, 110 |
Conread position: | 3-305 |
Cow position: | chr11:43831539-43831245 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 223 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 20, 220 |
Conread position: | 3-310 |
Cow position: | chr11:5221160-5220861 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 219 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 26, 104 |
Conread position: | 3-310 |
Cow position: | chr11:74171343-74171043 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 230 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 21, 88 |
Conread position: | 3-314 |
Cow position: | chr11:87168497-87168207 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 217 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 21, 77 |
Conread position: | 3-319 |
Cow position: | chr11:27817234-27816937 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 230 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 21, 53 |
Conread position: | 3-332 |
Cow position: | chr11:8087882-8087560 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 243 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 61, 18 |
Conread position: | 4-280 |
Cow position: | chr11:40574499-40574226 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 208 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 20, 98 |
Conread position: | 4-305 |
Cow position: | chr11:34761456-34761159 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 219 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 20, 80 |
Conread position: | 4-328 |
Cow position: | chr11:64101322-64101645 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 57 |
Conread position: | 5-329 |
Cow position: | chr11:34303737-34304059 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 150 |
Conread position: | 8-311 |
Cow position: | chr11:39830949-39830662 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 213 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 17, 149 |
Conread position: | 9-331 |
Cow position: | chr11:84872104-84872431 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 214 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 15, 185 |
Conread position: | 10-323 |
Cow position: | chr11:1774619-1774299 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 126 |
Conread position: | 12-277 |
Cow position: | chr11:57153384-57153117 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 198 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 12, 32 |
Conread position: | 12-323 |
Cow position: | chr11:15265545-15265236 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 226 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 12, 27 |
Conread position: | 12-325 |
Cow position: | chr11:25807461-25807146 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 102 |
Conread position: | 13-283 |
Cow position: | chr11:11109830-11109554 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 184 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 12, 153 |
Conread position: | 21-274 |
Cow position: | chr11:77713370-77713121 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 184 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 24, 69 |
Conread position: | 21-276 |
Cow position: | chr11:27610729-27610970 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 185 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 24, 50 |
Conread position: | 21-286 |
Cow position: | chr11:70605666-70605928 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 183 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 29, 137 |
Conread position: | 25-305 |
Cow position: | chr11:69491707-69491980 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 213 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 19, 129 |
Conread position: | 30-266 |
Cow position: | chr11:63520799-63521040 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 169 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 15, 58 |
Conread position: | 30-332 |
Cow position: | chr11:44064176-44064480 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 76 |
Conread position: | 37-325 |
Cow position: | chr11:43855928-43855643 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 219 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 9, 68 |
Conread position: | 51-314 |
Cow position: | chr11:19567357-19567608 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 205 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 15, 54 |
Conread position: | 55-306 |
Cow position: | chr11:53663452-53663695 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 184 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 18, 104 |
Conread position: | 62-306 |
Cow position: | chr11:17054111-17053873 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 172 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 28, 38 |
Conread position: | 62-319 |
Cow position: | chr11:55283198-55282931 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 62-332 |
Cow position: | chr11:35284433-35284688 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 188 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 246, 36 |
Conread position: | 67-314 |
Cow position: | chr11:29785451-29785688 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 182 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 30, 60 |
Conread position: | 84-329 |
Cow position: | chr11:38114089-38113856 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 168 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 123, 73 |
Conread position: | 99-323 |
Cow position: | chr11:54204454-54204241 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 166 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 99-327 |
Cow position: | chr11:34265798-34266017 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 170 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 214, 49 |
Conread position: | 100-312 |
Cow position: | chr11:18090510-18090717 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 154 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 54, 63 |
Conread position: | 100-331 |
Cow position: | chr11:30660657-30660888 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 105-321 |
Cow position: | chr11:21909762-21909547 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 170 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 29 |
Conread position: | 109-271 |
Cow position: | chr11:9192756-9192604 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 109-314 |
Cow position: | chr11:53755192-53754986 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 146 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 75, 39 |
Conread position: | 116-288 |
Cow position: | chr11:15106418-15106245 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 127 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 152, 51 |
Conread position: | 118-330 |
Cow position: | chr11:3261102-3261304 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 160 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 195, 41 |
Conread position: | 125-235 |
Cow position: | chr11:9295238-9295130 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 125-330 |
Cow position: | chr11:15374178-15374371 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 157 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 33, 42 |
Conread position: | 129-292 |
Cow position: | chr11:39166579-39166741 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 22, 39 |
Conread position: | 132-314 |
Cow position: | chr11:34024940-34025110 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 138 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 136-324 |
Cow position: | chr11:16363990-16363805 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 157 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 8, 27 |
Conread position: | 152-313 |
Cow position: | chr11:9424408-9424564 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 153-308 |
Cow position: | chr11:462689-462843 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 113 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 158-288 |
Cow position: | chr11:77477849-77477722 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 158-288 |
Cow position: | chr11:77478523-77478396 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 159-314 |
Cow position: | chr11:38009595-38009439 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 168-321 |
Cow position: | chr11:28748113-28747960 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 31, 135 |
Conread position: | 168-330 |
Cow position: | chr11:21544470-21544632 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 127, 140 |
Conread position: | 171-292 |
Cow position: | chr11:31355762-31355883 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 171-304 |
Cow position: | chr11:54485450-54485578 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 172-320 |
Cow position: | chr11:53331219-53331368 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 172-321 |
Cow position: | chr11:20998574-20998730 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 122 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 172-327 |
Cow position: | chr11:13828751-13828601 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 172-330 |
Cow position: | chr11:80780561-80780719 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 127 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 140, 86 |
Conread position: | 174-314 |
Cow position: | chr11:65777329-65777189 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 176-290 |
Cow position: | chr11:33103463-33103349 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 89 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 183-313 |
Cow position: | chr11:51020426-51020560 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 184-306 |
Cow position: | chr11:54497088-54496961 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 191-302 |
Cow position: | chr11:73007322-73007433 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 195-320 |
Cow position: | chr11:50027048-50026925 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 200-306 |
Cow position: | chr11:85005895-85006001 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 85 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.