Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-276 |
| Cow position: | chr12:27423501-27423775 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 44, 112 |
| Conread position: | 1-304 |
| Cow position: | chr12:26310852-26310558 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 1-306 |
| Cow position: | chr12:28214341-28214641 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 1-314 |
| Cow position: | chr12:20227137-20226824 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 1-317 |
| Cow position: | chr12:12709924-12709632 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 74 |
| Conread position: | 1-322 |
| Cow position: | chr12:10161713-10161385 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 184 |
| Conread position: | 1-328 |
| Cow position: | chr12:11306397-11306068 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 2-315 |
| Cow position: | chr12:7936827-7936526 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 2-316 |
| Cow position: | chr12:27718076-27718374 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 3-314 |
| Cow position: | chr12:33278168-33278457 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 69 |
| Conread position: | 6-317 |
| Cow position: | chr12:38223302-38222980 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 215 |
| Conread position: | 7-324 |
| Cow position: | chr12:33277369-33277051 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 8-278 |
| Cow position: | chr12:36975172-36974908 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 16, 169 |
| Conread position: | 8-320 |
| Cow position: | chr12:2838000-2837698 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 9-314 |
| Cow position: | chr12:8767381-8767071 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 15, 149 |
| Conread position: | 12-285 |
| Cow position: | chr12:7086360-7086628 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 95 |
| Conread position: | 13-326 |
| Cow position: | chr12:5896818-5896500 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 14-294 |
| Cow position: | chr12:7025193-7024909 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 9, 141 |
| Conread position: | 14-310 |
| Cow position: | chr12:16961852-16962152 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 37-328 |
| Cow position: | chr12:8467907-8467624 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 51, 33 |
| Conread position: | 64-313 |
| Cow position: | chr12:23499126-23499372 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 64-326 |
| Cow position: | chr12:33350650-33350902 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 65-322 |
| Cow position: | chr12:34475914-34476160 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 66-320 |
| Cow position: | chr12:29759178-29758924 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 94-318 |
| Cow position: | chr12:3572431-3572662 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 96-320 |
| Cow position: | chr12:29801532-29801756 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 212, 7 |
| Conread position: | 99-314 |
| Cow position: | chr12:42854116-42854321 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 103-329 |
| Cow position: | chr12:18337263-18337485 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 105-318 |
| Cow position: | chr12:13582613-13582825 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 106-318 |
| Cow position: | chr12:19808950-19808737 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 109-313 |
| Cow position: | chr12:32425952-32426162 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 111-326 |
| Cow position: | chr12:15147399-15147622 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 116-302 |
| Cow position: | chr12:25514457-25514644 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 126-319 |
| Cow position: | chr12:27111247-27111433 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 136-330 |
| Cow position: | chr12:20792166-20791969 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 165-326 |
| Cow position: | chr12:39710032-39710194 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 172-312 |
| Cow position: | chr12:38588288-38588429 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 179-314 |
| Cow position: | chr12:33451821-33451685 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 183-304 |
| Cow position: | chr12:27800028-27800150 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 97 |
Show alignments to all cow chromosomes.