Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-193 |
| Cow position: | chr14:24783397-24783591 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 1-231 |
| Cow position: | chr14:27579020-27579249 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 25, 155 |
| Conread position: | 1-247 |
| Cow position: | chr14:24739005-24738755 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 1-248 |
| Cow position: | chr14:32574910-32574659 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 1-306 |
| Cow position: | chr14:42693407-42693117 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 1-314 |
| Cow position: | chr14:19735003-19735315 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 1-314 |
| Cow position: | chr14:34912194-34912500 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 1-314 |
| Cow position: | chr14:44454205-44453895 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 23, 71 |
| Conread position: | 1-319 |
| Cow position: | chr14:17556399-17556083 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 154 |
| Conread position: | 1-323 |
| Cow position: | chr14:35605554-35605876 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 163 |
| Conread position: | 1-324 |
| Cow position: | chr14:40243932-40243610 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 1-325 |
| Cow position: | chr14:37983645-37983967 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 1-330 |
| Cow position: | chr14:10949750-10950071 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 2-329 |
| Cow position: | chr14:50650297-50649978 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 2-332 |
| Cow position: | chr14:15011715-15012046 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 3-309 |
| Cow position: | chr14:41712774-41712484 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 3-319 |
| Cow position: | chr14:15813570-15813237 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 292 |
| Conread position: | 3-326 |
| Cow position: | chr14:48415454-48415150 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 3-328 |
| Cow position: | chr14:22046601-22046288 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 3-328 |
| Cow position: | chr14:28007367-28007051 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 8-291 |
| Cow position: | chr14:44483203-44483474 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 9-304 |
| Cow position: | chr14:17051330-17051036 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 15, 101 |
| Conread position: | 12-321 |
| Cow position: | chr14:44886303-44885989 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 125 |
| Conread position: | 13-320 |
| Cow position: | chr14:30134090-30134403 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 11, 42 |
| Conread position: | 21-249 |
| Cow position: | chr14:42258700-42258470 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 81 |
| Conread position: | 25-332 |
| Cow position: | chr14:47880382-47880694 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 33-314 |
| Cow position: | chr14:25994294-25994571 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 5, 72 |
| Conread position: | 34-263 |
| Cow position: | chr14:15662492-15662723 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 134 |
| Conread position: | 43-332 |
| Cow position: | chr14:30762376-30762106 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 99, 30 |
| Conread position: | 44-314 |
| Cow position: | chr14:32903923-32904183 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 52-314 |
| Cow position: | chr14:38722574-38722320 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 58-329 |
| Cow position: | chr14:36420341-36420598 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 13, 6 |
| Conread position: | 91-304 |
| Cow position: | chr14:44023934-44023730 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 99-321 |
| Cow position: | chr14:3589260-3589465 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 105-327 |
| Cow position: | chr14:45529953-45529742 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 133, 20 |
| Conread position: | 107-331 |
| Cow position: | chr14:17462948-17462733 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 109-332 |
| Cow position: | chr14:35685448-35685667 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 111-319 |
| Cow position: | chr14:38000046-37999851 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 129-318 |
| Cow position: | chr14:5255624-5255431 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 152-320 |
| Cow position: | chr14:29481207-29481374 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 152-324 |
| Cow position: | chr14:44787463-44787295 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 87, 10 |
| Conread position: | 155-310 |
| Cow position: | chr14:38413094-38412941 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 127, 7 |
| Conread position: | 168-319 |
| Cow position: | chr14:33999543-33999693 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 5, 73 |
| Conread position: | 168-330 |
| Cow position: | chr14:37393911-37393747 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 168-332 |
| Cow position: | chr14:7600265-7600433 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 171-330 |
| Cow position: | chr14:14279662-14279826 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 151 |
| Conread position: | 172-331 |
| Cow position: | chr14:20643060-20643213 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 178-328 |
| Cow position: | chr14:28574810-28574659 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 182-320 |
| Cow position: | chr14:14573515-14573655 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 190-314 |
| Cow position: | chr14:21864587-21864702 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.