Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-219 |
| Cow position: | chr15:35042333-35042551 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 1-230 |
| Cow position: | chr15:34551878-34552110 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 107 |
| Conread position: | 1-260 |
| Cow position: | chr15:37470017-37469749 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 27 |
| Conread position: | 1-288 |
| Cow position: | chr15:12048788-12048507 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 1-291 |
| Cow position: | chr15:12283121-12283405 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 130 |
| Conread position: | 1-304 |
| Cow position: | chr15:7443959-7443674 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 1-306 |
| Cow position: | chr15:6523484-6523191 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 39 |
| Conread position: | 1-311 |
| Cow position: | chr15:13081277-13081580 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 159, 22 |
| Conread position: | 1-314 |
| Cow position: | chr15:16669476-16669161 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 1-314 |
| Cow position: | chr15:23265739-23266038 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 1-314 |
| Cow position: | chr15:26866804-26867092 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 1-315 |
| Cow position: | chr15:18403885-18404181 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 1-319 |
| Cow position: | chr15:17642160-17642463 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 1-319 |
| Cow position: | chr15:44797318-44796995 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 1-319 |
| Cow position: | chr15:52868772-52869086 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 1-320 |
| Cow position: | chr15:25683645-25683968 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 146 |
| Conread position: | 1-322 |
| Cow position: | chr15:37633319-37633634 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 1-323 |
| Cow position: | chr15:53728327-53728006 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 1-332 |
| Cow position: | chr15:579005-579332 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 163 |
| Conread position: | 2-290 |
| Cow position: | chr15:1888026-1888311 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 2-313 |
| Cow position: | chr15:31855421-31855736 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 3-192 |
| Cow position: | chr15:26365368-26365556 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 3-288 |
| Cow position: | chr15:11997702-11997994 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 3-310 |
| Cow position: | chr15:4622808-4622517 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 3-314 |
| Cow position: | chr15:52131791-52132103 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 3-318 |
| Cow position: | chr15:53712791-53713106 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 31 |
| Conread position: | 3-320 |
| Cow position: | chr15:19813548-19813231 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 116 |
| Conread position: | 3-326 |
| Cow position: | chr15:16972189-16971873 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 3-327 |
| Cow position: | chr15:8630290-8630612 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 5-314 |
| Cow position: | chr15:30570091-30570403 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 8-320 |
| Cow position: | chr15:21802506-21802809 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 9-305 |
| Cow position: | chr15:2437072-2437354 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 12-314 |
| Cow position: | chr15:9437460-9437759 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 146 |
| Conread position: | 17-312 |
| Cow position: | chr15:49279505-49279205 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 128 |
| Conread position: | 21-289 |
| Cow position: | chr15:10581383-10581643 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 21-314 |
| Cow position: | chr15:49271910-49272194 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 60 |
| Conread position: | 23-268 |
| Cow position: | chr15:53335330-53335570 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 34-330 |
| Cow position: | chr15:28608192-28607890 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 41, 8 |
| Conread position: | 39-331 |
| Cow position: | chr15:9428039-9427739 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 44 |
| Conread position: | 51-310 |
| Cow position: | chr15:39809506-39809765 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 54 |
| Conread position: | 52-331 |
| Cow position: | chr15:5912387-5912105 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 115 |
| Conread position: | 53-324 |
| Cow position: | chr15:31935541-31935803 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 6, 15 |
| Conread position: | 58-304 |
| Cow position: | chr15:11287379-11287132 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 107 |
| Conread position: | 62-248 |
| Cow position: | chr15:1892171-1891991 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 27, 19 |
| Conread position: | 62-314 |
| Cow position: | chr15:14610240-14609986 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 83, 167 |
| Conread position: | 62-325 |
| Cow position: | chr15:582853-583115 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 63-314 |
| Cow position: | chr15:40065906-40066152 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 73-320 |
| Cow position: | chr15:21182020-21182265 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 26, 81 |
| Conread position: | 99-318 |
| Cow position: | chr15:50243346-50243550 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 105-292 |
| Cow position: | chr15:6347753-6347940 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 143 |
| Conread position: | 111-323 |
| Cow position: | chr15:16989556-16989763 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 112-325 |
| Cow position: | chr15:31917651-31917447 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 196, 13 |
| Conread position: | 122-283 |
| Cow position: | chr15:26594382-26594216 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 127-320 |
| Cow position: | chr15:35067009-35067201 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 142-314 |
| Cow position: | chr15:41807446-41807278 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 147-314 |
| Cow position: | chr15:45665766-45665930 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 159-330 |
| Cow position: | chr15:9075431-9075603 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 87 |
| Conread position: | 162-305 |
| Cow position: | chr15:29337764-29337621 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-320 |
| Cow position: | chr15:36278083-36277925 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 166-326 |
| Cow position: | chr15:1992772-1992932 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-304 |
| Cow position: | chr15:16455845-16455709 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 172-320 |
| Cow position: | chr15:37491607-37491465 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 140, 35 |
| Conread position: | 177-304 |
| Cow position: | chr15:21417464-21417592 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 182-316 |
| Cow position: | chr15:27971615-27971481 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 186-332 |
| Cow position: | chr15:26365820-26365960 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 202-332 |
| Cow position: | chr15:39357375-39357245 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.