Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-229 |
| Cow position: | chr16:9703331-9703100 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 1-310 |
| Cow position: | chr16:30572350-30572037 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 1-313 |
| Cow position: | chr16:45057687-45058002 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 23, 117 |
| Conread position: | 1-314 |
| Cow position: | chr16:22785755-22785451 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 1-314 |
| Cow position: | chr16:41680483-41680168 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 1-314 |
| Cow position: | chr16:48894543-48894232 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 1-318 |
| Cow position: | chr16:43850553-43850230 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 168 |
| Conread position: | 1-319 |
| Cow position: | chr16:52650239-52649921 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 164 |
| Conread position: | 1-320 |
| Cow position: | chr16:16118736-16119059 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 105 |
| Conread position: | 1-328 |
| Cow position: | chr16:2371518-2371209 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 1-328 |
| Cow position: | chr16:4295238-4294923 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 21, 121 |
| Conread position: | 1-330 |
| Cow position: | chr16:14799459-14799130 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 1-331 |
| Cow position: | chr16:13044126-13044459 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 2-306 |
| Cow position: | chr16:3742851-3742540 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 2-320 |
| Cow position: | chr16:27075443-27075761 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 50 |
| Conread position: | 2-332 |
| Cow position: | chr16:12243266-12242940 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 146 |
| Conread position: | 3-289 |
| Cow position: | chr16:15509216-15509499 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 3-314 |
| Cow position: | chr16:23035015-23034705 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 3-329 |
| Cow position: | chr16:23878625-23878972 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 154 |
| Conread position: | 7-314 |
| Cow position: | chr16:43850221-43849927 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 8-329 |
| Cow position: | chr16:24038396-24038705 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 12-313 |
| Cow position: | chr16:56373587-56373290 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 107 |
| Conread position: | 13-319 |
| Cow position: | chr16:47781585-47781901 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 18-277 |
| Cow position: | chr16:14423203-14423460 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 18-310 |
| Cow position: | chr16:30109533-30109245 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 8, 103 |
| Conread position: | 20-318 |
| Cow position: | chr16:23301635-23301930 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 21-314 |
| Cow position: | chr16:48604488-48604209 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 28-318 |
| Cow position: | chr16:37441603-37441316 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 35-332 |
| Cow position: | chr16:2722734-2722429 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 67 |
| Conread position: | 37-293 |
| Cow position: | chr16:608569-608293 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 8, 259 |
| Conread position: | 48-308 |
| Cow position: | chr16:37508412-37508668 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 61 |
| Conread position: | 62-314 |
| Cow position: | chr16:4854620-4854381 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 69-332 |
| Cow position: | chr16:5131428-5131172 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 98-330 |
| Cow position: | chr16:12474020-12474253 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 207 |
| Conread position: | 99-318 |
| Cow position: | chr16:31374525-31374308 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 99-332 |
| Cow position: | chr16:14084767-14084539 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 100-332 |
| Cow position: | chr16:32352501-32352724 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 105-303 |
| Cow position: | chr16:17365475-17365672 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 105-320 |
| Cow position: | chr16:14444564-14444772 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 107-312 |
| Cow position: | chr16:51456709-51456906 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 41 |
| Conread position: | 112-314 |
| Cow position: | chr16:53547221-53547024 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 114-328 |
| Cow position: | chr16:52813521-52813325 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 198, 34 |
| Conread position: | 116-322 |
| Cow position: | chr16:19445999-19446193 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 181, 32 |
| Conread position: | 149-315 |
| Cow position: | chr16:26075278-26075445 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 152-317 |
| Cow position: | chr16:24635108-24634945 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 157-326 |
| Cow position: | chr16:13209759-13209922 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 158-330 |
| Cow position: | chr16:53516217-53516038 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 84 |
| Conread position: | 162-313 |
| Cow position: | chr16:26106594-26106743 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 162-319 |
| Cow position: | chr16:44618262-44618416 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 164-314 |
| Cow position: | chr16:10198433-10198584 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 168-312 |
| Cow position: | chr16:46450838-46450984 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 168-322 |
| Cow position: | chr16:52731572-52731720 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 6 |
| Conread position: | 172-304 |
| Cow position: | chr16:38397886-38397755 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 172-331 |
| Cow position: | chr16:37024799-37024643 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 140, 60 |
| Conread position: | 176-326 |
| Cow position: | chr16:17219001-17218857 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 190-331 |
| Cow position: | chr16:16163263-16163121 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 119 |
| Conread position: | 198-332 |
| Cow position: | chr16:14824504-14824371 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.