Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-244 |
| Cow position: | chr17:1309938-1309695 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 1-250 |
| Cow position: | chr17:30330656-30330889 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 1-306 |
| Cow position: | chr17:32451343-32451029 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-319 |
| Cow position: | chr17:12842580-12842903 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 22, 219 |
| Conread position: | 1-319 |
| Cow position: | chr17:18417920-18417597 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 62 |
| Conread position: | 1-328 |
| Cow position: | chr17:701716-702039 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 2-257 |
| Cow position: | chr17:3849051-3849306 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 20, 153 |
| Conread position: | 2-306 |
| Cow position: | chr17:6980427-6980119 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 2-314 |
| Cow position: | chr17:27622587-27622281 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 3-310 |
| Cow position: | chr17:2736042-2736344 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 3-322 |
| Cow position: | chr17:11225507-11225824 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 4-332 |
| Cow position: | chr17:28847327-28846994 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 153 |
| Conread position: | 8-320 |
| Cow position: | chr17:19789541-19789241 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 31 |
| Conread position: | 9-320 |
| Cow position: | chr17:7210948-7211252 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 12-314 |
| Cow position: | chr17:3223696-3223981 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 13-320 |
| Cow position: | chr17:34319813-34319492 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 14-332 |
| Cow position: | chr17:13703631-13703943 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 34-314 |
| Cow position: | chr17:17500998-17500733 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 10, 108 |
| Conread position: | 37-306 |
| Cow position: | chr17:33271419-33271155 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 62-331 |
| Cow position: | chr17:15450882-15451139 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 72-332 |
| Cow position: | chr17:404251-404516 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 12, 30 |
| Conread position: | 74-332 |
| Cow position: | chr17:10850953-10850705 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 98-319 |
| Cow position: | chr17:10261536-10261748 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 99-314 |
| Cow position: | chr17:26481244-26481455 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 60, 68 |
| Conread position: | 99-314 |
| Cow position: | chr17:43143372-43143157 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 102-314 |
| Cow position: | chr17:41899177-41898971 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 184, 47 |
| Conread position: | 109-332 |
| Cow position: | chr17:4625197-4625411 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 135-320 |
| Cow position: | chr17:19447332-19447150 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 16, 121 |
| Conread position: | 144-320 |
| Cow position: | chr17:13235977-13236151 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 158-328 |
| Cow position: | chr17:45212593-45212420 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 163-318 |
| Cow position: | chr17:1364603-1364451 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 165-314 |
| Cow position: | chr17:10436867-10436720 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 170-310 |
| Cow position: | chr17:14780030-14780171 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 114 |
| Conread position: | 170-319 |
| Cow position: | chr17:34772784-34772938 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 172-314 |
| Cow position: | chr17:37722660-37722517 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 190-314 |
| Cow position: | chr17:25117583-25117707 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-332 |
| Cow position: | chr17:31855315-31855460 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 197-314 |
| Cow position: | chr17:3797789-3797906 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.