Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-232 |
| Cow position: | chr18:23316528-23316293 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 1-313 |
| Cow position: | chr18:16259510-16259826 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 158 |
| Conread position: | 1-314 |
| Cow position: | chr18:1700837-1701144 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 1-314 |
| Cow position: | chr18:22433537-22433226 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 23, 153 |
| Conread position: | 1-314 |
| Cow position: | chr18:27405158-27405446 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 23, 62 |
| Conread position: | 1-314 |
| Cow position: | chr18:29081263-29081573 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 44, 158 |
| Conread position: | 1-314 |
| Cow position: | chr18:39475025-39474705 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 1-329 |
| Cow position: | chr18:53047808-53047483 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 106 |
| Conread position: | 1-332 |
| Cow position: | chr18:28085824-28086159 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 2-314 |
| Cow position: | chr18:24664191-24663886 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 2-314 |
| Cow position: | chr18:32860900-32861212 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 4-332 |
| Cow position: | chr18:22065114-22064804 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 20, 29 |
| Conread position: | 6-312 |
| Cow position: | chr18:50880735-50881047 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 116 |
| Conread position: | 21-323 |
| Cow position: | chr18:25846765-25846467 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 140 |
| Conread position: | 21-325 |
| Cow position: | chr18:21123250-21122959 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 28-305 |
| Cow position: | chr18:50242338-50242610 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 69, 90 |
| Conread position: | 62-325 |
| Cow position: | chr18:49436664-49436923 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 94-328 |
| Cow position: | chr18:52870956-52871184 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 99-257 |
| Cow position: | chr18:8170771-8170928 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 99-317 |
| Cow position: | chr18:19213524-19213297 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 99-332 |
| Cow position: | chr18:26866188-26866414 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 216, 50 |
| Conread position: | 103-315 |
| Cow position: | chr18:54629057-54628844 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 105-320 |
| Cow position: | chr18:1129256-1129461 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 195, 20 |
| Conread position: | 109-306 |
| Cow position: | chr18:36456399-36456592 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 110-306 |
| Cow position: | chr18:12078743-12078548 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 31, 48 |
| Conread position: | 112-278 |
| Cow position: | chr18:5060174-5060009 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 118-314 |
| Cow position: | chr18:39500886-39500694 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 164 |
| Conread position: | 125-292 |
| Cow position: | chr18:51331968-51332133 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 125-329 |
| Cow position: | chr18:1195848-1196047 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 95 |
| Conread position: | 149-331 |
| Cow position: | chr18:33896993-33897169 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 165, 34 |
| Conread position: | 159-327 |
| Cow position: | chr18:1740714-1740546 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-303 |
| Cow position: | chr18:26667690-26667826 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 166-320 |
| Cow position: | chr18:32371707-32371556 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 181-304 |
| Cow position: | chr18:35471134-35471011 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-332 |
| Cow position: | chr18:32286652-32286800 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 208-314 |
| Cow position: | chr18:23503385-23503281 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
Show alignments to all cow chromosomes.