Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-205 |
| Cow position: | chr19:51070607-51070407 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 1-228 |
| Cow position: | chr19:22670590-22670362 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 44, 128 |
| Conread position: | 1-237 |
| Cow position: | chr19:19242344-19242586 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 1-276 |
| Cow position: | chr19:30188518-30188236 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 1-314 |
| Cow position: | chr19:6362556-6362869 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 49 |
| Conread position: | 1-314 |
| Cow position: | chr19:30349954-30349653 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 1-323 |
| Cow position: | chr19:25846585-25846899 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 1-329 |
| Cow position: | chr19:28560543-28560210 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 1-332 |
| Cow position: | chr19:4600779-4601104 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 52 |
| Conread position: | 2-318 |
| Cow position: | chr19:55898317-55898623 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 23, 36 |
| Conread position: | 3-233 |
| Cow position: | chr19:49484025-49484256 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 14, 130 |
| Conread position: | 3-306 |
| Cow position: | chr19:30051723-30051435 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 8-321 |
| Cow position: | chr19:28606078-28605761 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 151 |
| Conread position: | 9-332 |
| Cow position: | chr19:30746691-30747022 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 90 |
| Conread position: | 12-304 |
| Cow position: | chr19:4548373-4548079 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 83 |
| Conread position: | 12-332 |
| Cow position: | chr19:3082361-3082701 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 12-332 |
| Cow position: | chr19:30880099-30880417 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 22-320 |
| Cow position: | chr19:36388635-36388351 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 30-331 |
| Cow position: | chr19:47772322-47772624 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 227 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 15, 124 |
| Conread position: | 34-321 |
| Cow position: | chr19:41504271-41504561 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 138 |
| Conread position: | 38-325 |
| Cow position: | chr19:33590033-33590317 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 47 |
| Conread position: | 52-290 |
| Cow position: | chr19:13448484-13448724 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 14, 47 |
| Conread position: | 53-320 |
| Cow position: | chr19:6478494-6478225 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 99 |
| Conread position: | 98-320 |
| Cow position: | chr19:39299530-39299308 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 21, 136 |
| Conread position: | 100-328 |
| Cow position: | chr19:17282596-17282368 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 102-328 |
| Cow position: | chr19:30385144-30385370 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 111-266 |
| Cow position: | chr19:36479221-36479365 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 112-310 |
| Cow position: | chr19:14534093-14533899 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 129-331 |
| Cow position: | chr19:425893-425708 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 129-332 |
| Cow position: | chr19:35826802-35827001 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 142, 30 |
| Conread position: | 135-331 |
| Cow position: | chr19:12478143-12477944 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 143-278 |
| Cow position: | chr19:12130805-12130672 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 144-331 |
| Cow position: | chr19:41554676-41554856 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 158-322 |
| Cow position: | chr19:33955188-33955354 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 164-315 |
| Cow position: | chr19:30148038-30147884 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 7 |
| Conread position: | 171-306 |
| Cow position: | chr19:7323241-7323106 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 50 |
| Conread position: | 173-306 |
| Cow position: | chr19:4500488-4500353 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 190-314 |
| Cow position: | chr19:21023432-21023558 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 91 |
| Conread position: | 190-317 |
| Cow position: | chr19:9005599-9005473 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 195-325 |
| Cow position: | chr19:37601694-37601565 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.