Cow genome map


           Conread name:
           Mixn-0036c18
        

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               1-198
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 165
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               23, 104
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 158
               

               Conread position:
               1-313
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               1-319
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               23, 123
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               1-320
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 45
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 101
               

               Conread position:
               1-327
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 290
               

               Conread position:
               1-328
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 83
               

               Conread position:
               1-331
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               2-315
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               2-316
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               2-324
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 128
               

               Conread position:
               3-269
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               96, 34
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               21, 152
               

               Conread position:
               3-303
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 154
               

               Conread position:
               3-314
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               4-296
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 163
               

               Conread position:
               4-312
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               20, 169
               

               Conread position:
               6-332
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               7-276
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               8-321
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               11-229
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               34, 105
               

               Conread position:
               12-306
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               33, 103
               

               Conread position:
               12-318
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               12-332
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               21-310
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               21-314
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               24, 15
               

               Conread position:
               21-330
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               23-326
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               26-272
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               28-311
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               28-331
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               33-331
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               12, 74
               

               Conread position:
               34-320
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               42-313
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               24, 88
               

               Conread position:
               43-314
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 70
               

               Conread position:
               46-310
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               50-332
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               51-313
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               46, 77
               

               Conread position:
               62-257
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 71
               

               Conread position:
               64-321
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               65-292
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               66-305
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 57
               

               Conread position:
               99-306
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               99-313
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               99-332
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               105-304
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 110
               

               Conread position:
               107-319
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               109-314
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               116, 48
               

               Conread position:
               112-306
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               113-327
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               116-321
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               126-314
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               128-310
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               143-332
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               152-323
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               161-314
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               162-325
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 156
               

               Conread position:
               172-300
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 13
               

               Conread position:
               172-327
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-332
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               95, 41
               

               Conread position:
               175-332
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 130
               

               Conread position:
               176-324
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               177-304
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               182-328
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               190-306
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               90
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               190-313
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               226-318
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.