Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-319 |
| Cow position: | chr21:22941719-22942035 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 1-319 |
| Cow position: | chr21:26742156-26741864 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 1-319 |
| Cow position: | chr21:30567600-30567309 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 1-323 |
| Cow position: | chr21:26632111-26631797 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 1-326 |
| Cow position: | chr21:45447933-45448253 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 151 |
| Conread position: | 1-330 |
| Cow position: | chr21:23286296-23285971 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 2-277 |
| Cow position: | chr21:26579650-26579923 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 2-314 |
| Cow position: | chr21:6667546-6667848 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 2-320 |
| Cow position: | chr21:15543604-15543292 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 3-321 |
| Cow position: | chr21:39075131-39074817 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 4-323 |
| Cow position: | chr21:45962746-45963067 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 20, 87 |
| Conread position: | 8-320 |
| Cow position: | chr21:27521067-27520748 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 12-314 |
| Cow position: | chr21:6151242-6151550 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 14-314 |
| Cow position: | chr21:28709125-28709440 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 10, 96 |
| Conread position: | 15-230 |
| Cow position: | chr21:16679146-16679359 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 21-238 |
| Cow position: | chr21:5994612-5994399 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 25-320 |
| Cow position: | chr21:38021267-38021555 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 105 |
| Conread position: | 27-331 |
| Cow position: | chr21:12079591-12079886 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 28-323 |
| Cow position: | chr21:17672007-17671718 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 51-304 |
| Cow position: | chr21:9976586-9976830 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 51-319 |
| Cow position: | chr21:37282919-37283175 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 44, 115 |
| Conread position: | 64-332 |
| Cow position: | chr21:42396394-42396655 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 84-315 |
| Cow position: | chr21:23399403-23399618 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 91-331 |
| Cow position: | chr21:16166219-16165976 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 57, 148 |
| Conread position: | 98-331 |
| Cow position: | chr21:27678460-27678687 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 100-314 |
| Cow position: | chr21:6282376-6282577 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 100-327 |
| Cow position: | chr21:10965483-10965719 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 176 |
| Conread position: | 105-265 |
| Cow position: | chr21:12756387-12756545 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 109-315 |
| Cow position: | chr21:27089506-27089295 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 48, 186 |
| Conread position: | 118-277 |
| Cow position: | chr21:33975103-33975266 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 30 |
| Conread position: | 130-332 |
| Cow position: | chr21:28650820-28651021 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 182, 27 |
| Conread position: | 145-331 |
| Cow position: | chr21:37170257-37170436 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 124, 17 |
| Conread position: | 158-319 |
| Cow position: | chr21:454818-454971 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 159-303 |
| Cow position: | chr21:45286273-45286133 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 172-310 |
| Cow position: | chr21:24972112-24971974 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 172-321 |
| Cow position: | chr21:39527400-39527546 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 104, 77 |
| Conread position: | 181-332 |
| Cow position: | chr21:1506980-1507130 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 182-313 |
| Cow position: | chr21:25019523-25019654 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-332 |
| Cow position: | chr21:5588907-5588758 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 131, 65 |
| Conread position: | 189-320 |
| Cow position: | chr21:40441886-40441755 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 123, 11 |
| Conread position: | 190-314 |
| Cow position: | chr21:29943438-29943562 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-330 |
| Cow position: | chr21:37940839-37940704 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 116, 0 |
Show alignments to all cow chromosomes.