Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-249 |
| Cow position: | chr25:36235539-36235297 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 1-274 |
| Cow position: | chr25:38358373-38358634 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 1-276 |
| Cow position: | chr25:5567473-5567186 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-303 |
| Cow position: | chr25:16193251-16192950 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 1-313 |
| Cow position: | chr25:34159667-34159350 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 181 |
| Conread position: | 1-317 |
| Cow position: | chr25:19686473-19686155 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 1-321 |
| Cow position: | chr25:23014439-23014747 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 1-323 |
| Cow position: | chr25:13704292-13704614 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 1-324 |
| Cow position: | chr25:13123497-13123817 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 154 |
| Conread position: | 1-325 |
| Cow position: | chr25:17472941-17473265 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 150 |
| Conread position: | 1-328 |
| Cow position: | chr25:16940578-16940250 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 2-317 |
| Cow position: | chr25:33345931-33346223 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 2-332 |
| Cow position: | chr25:8618136-8617814 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 2-332 |
| Cow position: | chr25:11526736-11526425 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 70 |
| Conread position: | 2-332 |
| Cow position: | chr25:20180752-20181078 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 22, 162 |
| Conread position: | 3-290 |
| Cow position: | chr25:13486627-13486895 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 4-320 |
| Cow position: | chr25:5377358-5377049 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 24, 120 |
| Conread position: | 7-293 |
| Cow position: | chr25:18206018-18205745 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 8-243 |
| Cow position: | chr25:30036036-30036273 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 36, 147 |
| Conread position: | 8-320 |
| Cow position: | chr25:14279732-14280031 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 13-322 |
| Cow position: | chr25:16240325-16240023 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 73 |
| Conread position: | 31-244 |
| Cow position: | chr25:35038114-35037912 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 15 |
| Conread position: | 47-326 |
| Cow position: | chr25:40833107-40832828 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 49-321 |
| Cow position: | chr25:10010223-10009962 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 17, 52 |
| Conread position: | 62-322 |
| Cow position: | chr25:20497140-20497381 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 99-329 |
| Cow position: | chr25:9785668-9785439 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 25 |
| Conread position: | 100-306 |
| Cow position: | chr25:20624185-20624387 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 100-332 |
| Cow position: | chr25:8447842-8448066 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 208, 59 |
| Conread position: | 101-319 |
| Cow position: | chr25:16687726-16687514 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 105-310 |
| Cow position: | chr25:15564575-15564770 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 110-310 |
| Cow position: | chr25:33002145-33002339 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 110-332 |
| Cow position: | chr25:20457412-20457201 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 112-289 |
| Cow position: | chr25:28008006-28007831 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 116-314 |
| Cow position: | chr25:13216174-13216364 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 127-332 |
| Cow position: | chr25:20423280-20423482 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 160-321 |
| Cow position: | chr25:21056583-21056420 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 172-320 |
| Cow position: | chr25:5534010-5533866 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 178-324 |
| Cow position: | chr25:40828798-40828649 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 190-322 |
| Cow position: | chr25:3685708-3685573 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 19 |
| Conread position: | 198-299 |
| Cow position: | chr25:25714160-25714261 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.