Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-250 |
| Cow position: | chr27:11935375-11935116 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 1-310 |
| Cow position: | chr27:3935019-3935344 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 23, 146 |
| Conread position: | 1-314 |
| Cow position: | chr27:9261494-9261178 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 118 |
| Conread position: | 1-319 |
| Cow position: | chr27:11021431-11021125 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 1-322 |
| Cow position: | chr27:26091735-26092055 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 1-332 |
| Cow position: | chr27:18589416-18589088 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 102 |
| Conread position: | 2-315 |
| Cow position: | chr27:18694026-18694328 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 2-327 |
| Cow position: | chr27:23073963-23073635 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 3-310 |
| Cow position: | chr27:17564701-17564397 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 69, 23 |
| Conread position: | 3-313 |
| Cow position: | chr27:4449653-4449947 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 4-326 |
| Cow position: | chr27:4962476-4962778 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 19, 42 |
| Conread position: | 6-327 |
| Cow position: | chr27:13860926-13861221 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 67 |
| Conread position: | 9-314 |
| Cow position: | chr27:18057170-18056864 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 151 |
| Conread position: | 9-314 |
| Cow position: | chr27:30889225-30889527 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 21-318 |
| Cow position: | chr27:4508445-4508142 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 21-320 |
| Cow position: | chr27:2246644-2246361 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 25, 72 |
| Conread position: | 21-321 |
| Cow position: | chr27:31238336-31238631 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 58 |
| Conread position: | 24-330 |
| Cow position: | chr27:15211414-15211093 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 51-325 |
| Cow position: | chr27:7860140-7860412 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 73-287 |
| Cow position: | chr27:12547767-12547979 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 81 |
| Conread position: | 81-309 |
| Cow position: | chr27:31376187-31375971 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 12 |
| Conread position: | 90-238 |
| Cow position: | chr27:30643977-30643829 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 99-306 |
| Cow position: | chr27:11956115-11956320 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 110 |
| Conread position: | 99-314 |
| Cow position: | chr27:18179104-18179314 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 99-332 |
| Cow position: | chr27:31524107-31523880 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 105-306 |
| Cow position: | chr27:18573463-18573264 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 105-322 |
| Cow position: | chr27:4921888-4922101 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 106-310 |
| Cow position: | chr27:15517035-15517238 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 109-314 |
| Cow position: | chr27:18546477-18546289 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 121-306 |
| Cow position: | chr27:12000116-12000298 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 139-328 |
| Cow position: | chr27:23966323-23966136 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 144-324 |
| Cow position: | chr27:1540731-1540904 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 174, 61 |
| Conread position: | 149-303 |
| Cow position: | chr27:16509582-16509734 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 163-324 |
| Cow position: | chr27:7183796-7183958 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 119, 0 |
Show alignments to all cow chromosomes.