Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-277 |
| Cow position: | chr28:6355363-6355634 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 1-296 |
| Cow position: | chr28:24468342-24468630 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 1-314 |
| Cow position: | chr28:34117378-34117692 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 28 |
| Conread position: | 1-314 |
| Cow position: | chr28:34346964-34346656 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 1-315 |
| Cow position: | chr28:7799900-7799599 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 1-319 |
| Cow position: | chr28:5912554-5912235 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 1-320 |
| Cow position: | chr28:28630864-28631168 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 1-320 |
| Cow position: | chr28:31994364-31994027 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 1-331 |
| Cow position: | chr28:15349752-15350072 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 2-234 |
| Cow position: | chr28:6277228-6277002 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 2-313 |
| Cow position: | chr28:10647801-10647490 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 2-314 |
| Cow position: | chr28:22360933-22361226 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 2-315 |
| Cow position: | chr28:11923822-11923498 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 123 |
| Conread position: | 2-332 |
| Cow position: | chr28:2340827-2341157 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 20, 135 |
| Conread position: | 3-314 |
| Cow position: | chr28:22614205-22614494 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 4-277 |
| Cow position: | chr28:32284708-32284435 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 9, 143 |
| Conread position: | 5-331 |
| Cow position: | chr28:26626882-26626575 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 9-311 |
| Cow position: | chr28:17762645-17762954 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 19, 29 |
| Conread position: | 12-166 |
| Cow position: | chr28:23390642-23390804 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 12-233 |
| Cow position: | chr28:17598726-17598496 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 12-306 |
| Cow position: | chr28:4803160-4802879 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 60-328 |
| Cow position: | chr28:20095225-20095502 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 32, 26 |
| Conread position: | 81-325 |
| Cow position: | chr28:6103083-6103322 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 11, 46 |
| Conread position: | 90-330 |
| Cow position: | chr28:25926702-25926935 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 56, 68 |
| Conread position: | 99-314 |
| Cow position: | chr28:3898435-3898636 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 143-319 |
| Cow position: | chr28:11379273-11379102 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 158-314 |
| Cow position: | chr28:8172816-8172663 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 172-330 |
| Cow position: | chr28:16251802-16251645 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 175-319 |
| Cow position: | chr28:11284071-11283926 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 175-328 |
| Cow position: | chr28:27890324-27890170 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 176-318 |
| Cow position: | chr28:7592651-7592794 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 177-325 |
| Cow position: | chr28:16804807-16804659 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-328 |
| Cow position: | chr28:16241233-16241084 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 182-319 |
| Cow position: | chr28:22831051-22831190 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 182-331 |
| Cow position: | chr28:22339897-22340042 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 184-327 |
| Cow position: | chr28:25191789-25191645 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 123, 52 |
| Conread position: | 190-303 |
| Cow position: | chr28:12384498-12384611 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 195-306 |
| Cow position: | chr28:13179648-13179757 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 37 |
| Conread position: | 198-324 |
| Cow position: | chr28:34338240-34338365 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 118, 0 |
Show alignments to all cow chromosomes.