Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-226 |
| Cow position: | chr29:22454543-22454324 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 1-312 |
| Cow position: | chr29:30921118-30920787 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-321 |
| Cow position: | chr29:3346253-3346559 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 1-327 |
| Cow position: | chr29:16359910-16360226 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 53, 106 |
| Conread position: | 1-332 |
| Cow position: | chr29:34330956-34330615 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 2-257 |
| Cow position: | chr29:4458878-4459133 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 2-314 |
| Cow position: | chr29:3822830-3823139 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 2-314 |
| Cow position: | chr29:7738406-7738100 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 2-314 |
| Cow position: | chr29:8890971-8890667 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 2-322 |
| Cow position: | chr29:18338249-18337948 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 8 |
| Conread position: | 2-332 |
| Cow position: | chr29:23988778-23989110 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 152 |
| Conread position: | 3-312 |
| Cow position: | chr29:15853284-15852978 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 55 |
| Conread position: | 7-314 |
| Cow position: | chr29:12193465-12193754 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 93, 11 |
| Conread position: | 8-326 |
| Cow position: | chr29:35037026-35037337 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 12-321 |
| Cow position: | chr29:794888-795198 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 13-322 |
| Cow position: | chr29:8906830-8907125 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 22-314 |
| Cow position: | chr29:44028100-44028386 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 77 |
| Conread position: | 26-274 |
| Cow position: | chr29:19931643-19931886 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 27 |
| Conread position: | 47-306 |
| Cow position: | chr29:22655606-22655356 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 62 |
| Conread position: | 51-331 |
| Cow position: | chr29:7892630-7892352 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 15, 100 |
| Conread position: | 62-319 |
| Cow position: | chr29:28115500-28115755 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 63-326 |
| Cow position: | chr29:682183-681938 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 99-238 |
| Cow position: | chr29:24442937-24442801 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 99-305 |
| Cow position: | chr29:4670870-4670675 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 101-326 |
| Cow position: | chr29:34392188-34392412 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 67, 11 |
| Conread position: | 109-306 |
| Cow position: | chr29:19252663-19252853 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 107, 29 |
| Conread position: | 109-310 |
| Cow position: | chr29:30814077-30814270 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 112-326 |
| Cow position: | chr29:30581199-30581412 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 114-326 |
| Cow position: | chr29:849475-849689 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 126-314 |
| Cow position: | chr29:1711452-1711632 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 135-324 |
| Cow position: | chr29:16164627-16164445 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 147-332 |
| Cow position: | chr29:18361265-18361080 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 28, 161 |
| Conread position: | 159-310 |
| Cow position: | chr29:40091682-40091531 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-314 |
| Cow position: | chr29:38386857-38387007 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-306 |
| Cow position: | chr29:13653906-13654041 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 169-315 |
| Cow position: | chr29:8218709-8218852 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 126, 14 |
| Conread position: | 190-328 |
| Cow position: | chr29:38333947-38334089 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 201-330 |
| Cow position: | chr29:42269674-42269805 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 222-330 |
| Cow position: | chr29:2847699-2847592 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
Show alignments to all cow chromosomes.