Cow genome map
Conread name: | Mixn-0036c18 |
Conread position: | 1-238 |
Cow position: | chr5:57127755-57127990 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 189 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 12, 98 |
Conread position: | 1-247 |
Cow position: | chr5:56109857-56109605 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 176 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 33, 27 |
Conread position: | 1-270 |
Cow position: | chr5:13575446-13575180 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 199 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 23, 133 |
Conread position: | 1-277 |
Cow position: | chr5:60968734-60969017 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 107 |
Conread position: | 1-292 |
Cow position: | chr5:34483241-34482958 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 216 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 21, 107 |
Conread position: | 1-305 |
Cow position: | chr5:71278956-71279253 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 221 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 37, 27 |
Conread position: | 1-310 |
Cow position: | chr5:27679520-27679212 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 21 |
Conread position: | 1-314 |
Cow position: | chr5:29431345-29431055 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 215 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 23, 54 |
Conread position: | 1-314 |
Cow position: | chr5:38274074-38274398 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 222 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1-324 |
Cow position: | chr5:21145929-21145600 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 112 |
Conread position: | 1-325 |
Cow position: | chr5:1304930-1304602 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 244 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 23, 37 |
Conread position: | 1-328 |
Cow position: | chr5:42587621-42587278 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 176 |
Conread position: | 1-329 |
Cow position: | chr5:63620859-63621175 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 229 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 23, 36 |
Conread position: | 1-330 |
Cow position: | chr5:51953174-51953506 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 173 |
Conread position: | 1-332 |
Cow position: | chr5:33570182-33570482 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 239 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 26, 15 |
Conread position: | 2-293 |
Cow position: | chr5:56741963-56742243 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 218 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 43, 101 |
Conread position: | 2-308 |
Cow position: | chr5:35748844-35749145 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 101 |
Conread position: | 2-320 |
Cow position: | chr5:67463519-67463834 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 18 |
Conread position: | 2-322 |
Cow position: | chr5:51076324-51076000 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 92 |
Conread position: | 3-292 |
Cow position: | chr5:15882151-15881859 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 208 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 21, 91 |
Conread position: | 3-314 |
Cow position: | chr5:15705253-15704951 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 229 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 21, 40 |
Conread position: | 3-319 |
Cow position: | chr5:14072269-14071963 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 51 |
Conread position: | 3-320 |
Cow position: | chr5:28770567-28770878 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 234 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 19, 40 |
Conread position: | 3-325 |
Cow position: | chr5:11235880-11236205 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 237 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 21, 158 |
Conread position: | 3-329 |
Cow position: | chr5:9585435-9585122 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 236 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 21, 51 |
Conread position: | 3-329 |
Cow position: | chr5:12329391-12329069 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 235 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 22, 116 |
Conread position: | 4-304 |
Cow position: | chr5:58842412-58842706 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 218 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 20, 152 |
Conread position: | 4-314 |
Cow position: | chr5:26562447-26562750 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 101 |
Conread position: | 8-323 |
Cow position: | chr5:25355312-25355622 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 237 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 16, 126 |
Conread position: | 9-187 |
Cow position: | chr5:25925564-25925383 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 143 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 15, 148 |
Conread position: | 11-306 |
Cow position: | chr5:40978266-40978566 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 198 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 38, 17 |
Conread position: | 12-314 |
Cow position: | chr5:37048377-37048657 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 215 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 15, 27 |
Conread position: | 12-328 |
Cow position: | chr5:23234793-23235088 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 233 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 16, 26 |
Conread position: | 14-314 |
Cow position: | chr5:26098363-26098074 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 225 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 10, 81 |
Conread position: | 16-232 |
Cow position: | chr5:34168459-34168679 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 154 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 8, 46 |
Conread position: | 32-324 |
Cow position: | chr5:12581044-12581315 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 215 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 40, 13 |
Conread position: | 32-328 |
Cow position: | chr5:9025510-9025811 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 136 |
Conread position: | 38-266 |
Cow position: | chr5:39206955-39206729 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 164 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 7, 62 |
Conread position: | 38-320 |
Cow position: | chr5:29029683-29029963 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 215 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 26, 17 |
Conread position: | 39-327 |
Cow position: | chr5:15808580-15808290 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 219 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 6, 78 |
Conread position: | 40-328 |
Cow position: | chr5:1286703-1286993 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 200 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 25, 117 |
Conread position: | 45-314 |
Cow position: | chr5:39118509-39118759 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 191 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 49-276 |
Cow position: | chr5:20717475-20717693 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 164 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 18, 55 |
Conread position: | 49-310 |
Cow position: | chr5:54157800-54158059 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 186 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 48, 128 |
Conread position: | 49-318 |
Cow position: | chr5:60725613-60725881 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 203 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 17, 55 |
Conread position: | 55-314 |
Cow position: | chr5:31551191-31551443 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 192 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 11, 45 |
Conread position: | 56-293 |
Cow position: | chr5:18379612-18379835 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 171 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 41, 80 |
Conread position: | 62-328 |
Cow position: | chr5:70532573-70532856 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 196 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 62-330 |
Cow position: | chr5:20648893-20648630 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 204 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 22, 41 |
Conread position: | 64-305 |
Cow position: | chr5:19299108-19298870 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 189 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 33, 105 |
Conread position: | 64-314 |
Cow position: | chr5:47698021-47697774 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 190 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 25, 78 |
Conread position: | 64-319 |
Cow position: | chr5:56826411-56826662 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 190 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 176, 71 |
Conread position: | 65-320 |
Cow position: | chr5:33516413-33516152 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 194 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 32, 105 |
Conread position: | 66-270 |
Cow position: | chr5:70253033-70253238 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 146 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 31, 172 |
Conread position: | 76-327 |
Cow position: | chr5:13156680-13156429 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 181 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 8, 61 |
Conread position: | 79-314 |
Cow position: | chr5:37624457-37624690 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 179 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 13, 84 |
Conread position: | 84-314 |
Cow position: | chr5:57490544-57490770 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 164 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 81, 15 |
Conread position: | 92-276 |
Cow position: | chr5:31943989-31944169 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 139 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 146, 30 |
Conread position: | 94-306 |
Cow position: | chr5:33443251-33443032 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 55, 168 |
Conread position: | 99-321 |
Cow position: | chr5:27493139-27493356 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 172 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 99-324 |
Cow position: | chr5:9232863-9232653 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 169 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 99-331 |
Cow position: | chr5:67579458-67579684 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 100-312 |
Cow position: | chr5:3752133-3752360 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 45, 22 |
Conread position: | 101-310 |
Cow position: | chr5:50159636-50159829 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 162 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 160, 21 |
Conread position: | 104-317 |
Cow position: | chr5:54761441-54761649 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 163 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 146, 46 |
Conread position: | 109-302 |
Cow position: | chr5:38911568-38911771 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 148 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 111-331 |
Cow position: | chr5:58384704-58384917 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 167 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 80, 29 |
Conread position: | 112-314 |
Cow position: | chr5:7584423-7584229 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 112-327 |
Cow position: | chr5:12602310-12602520 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 161 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 114-330 |
Cow position: | chr5:49330287-49330505 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 165 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 41, 107 |
Conread position: | 118-310 |
Cow position: | chr5:31461624-31461819 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 33, 45 |
Conread position: | 145-331 |
Cow position: | chr5:67001888-67002070 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 67, 7 |
Conread position: | 158-314 |
Cow position: | chr5:62580438-62580593 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 161-280 |
Cow position: | chr5:37610734-37610854 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 93 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 166-314 |
Cow position: | chr5:57629827-57629679 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 119 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 168-324 |
Cow position: | chr5:624757-624913 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 58, 17 |
Conread position: | 171-321 |
Cow position: | chr5:8202655-8202809 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 171-323 |
Cow position: | chr5:16211298-16211140 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 172-306 |
Cow position: | chr5:65590635-65590501 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 172-329 |
Cow position: | chr5:28370933-28370787 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 181-310 |
Cow position: | chr5:59640055-59640184 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 101 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 184-332 |
Cow position: | chr5:55856601-55856457 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 124, 29 |
Conread position: | 185-327 |
Cow position: | chr5:62862815-62862672 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 186-327 |
Cow position: | chr5:5194561-5194698 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 194-327 |
Cow position: | chr5:34470889-34470753 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 194-330 |
Cow position: | chr5:60472082-60471946 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 47, 76 |
Conread position: | 215-328 |
Cow position: | chr5:10785015-10784902 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 217-326 |
Cow position: | chr5:9505247-9505138 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 64, 90 |
Conread position: | 227-320 |
Cow position: | chr5:33564980-33565073 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 79 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.