Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-186 |
| Cow position: | chr7:31442032-31441841 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-269 |
| Cow position: | chr7:39512280-39512025 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 1-276 |
| Cow position: | chr7:5701240-5701520 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 23, 112 |
| Conread position: | 1-277 |
| Cow position: | chr7:42222100-42221826 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 1-298 |
| Cow position: | chr7:45064095-45063801 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 1-303 |
| Cow position: | chr7:62516332-62516629 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 1-304 |
| Cow position: | chr7:45099549-45099855 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 23, 60 |
| Conread position: | 1-310 |
| Cow position: | chr7:20104693-20104378 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 140 |
| Conread position: | 1-313 |
| Cow position: | chr7:11592898-11592600 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 1-314 |
| Cow position: | chr7:68246633-68246938 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 1-318 |
| Cow position: | chr7:12920321-12920011 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 1-321 |
| Cow position: | chr7:56664384-56664692 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 1-329 |
| Cow position: | chr7:45722052-45722365 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 1-329 |
| Cow position: | chr7:62048734-62049058 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 1-330 |
| Cow position: | chr7:48335163-48334855 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 2-304 |
| Cow position: | chr7:5247614-5247315 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 22, 212 |
| Conread position: | 2-305 |
| Cow position: | chr7:59844778-59845077 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 3-311 |
| Cow position: | chr7:52131445-52131757 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 3-314 |
| Cow position: | chr7:29377823-29377522 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 9-314 |
| Cow position: | chr7:46216377-46216681 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 17-332 |
| Cow position: | chr7:20288922-20288613 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 18-326 |
| Cow position: | chr7:59204607-59204928 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 16, 303 |
| Conread position: | 21-320 |
| Cow position: | chr7:6006836-6006549 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 24-330 |
| Cow position: | chr7:61425916-61426222 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 37-321 |
| Cow position: | chr7:68366894-68366601 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 7, 136 |
| Conread position: | 52-310 |
| Cow position: | chr7:40622555-40622805 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 62-332 |
| Cow position: | chr7:56356685-56356426 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 63-271 |
| Cow position: | chr7:30027524-30027732 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 99-313 |
| Cow position: | chr7:54060419-54060199 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 48 |
| Conread position: | 105-330 |
| Cow position: | chr7:32589233-32589461 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 111-324 |
| Cow position: | chr7:43004819-43005028 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 112-320 |
| Cow position: | chr7:63547343-63547155 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 120-320 |
| Cow position: | chr7:23612552-23612347 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 149 |
| Conread position: | 127-314 |
| Cow position: | chr7:43257642-43257826 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 134, 25 |
| Conread position: | 129-329 |
| Cow position: | chr7:185336-185533 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 183, 28 |
| Conread position: | 133-318 |
| Cow position: | chr7:52573322-52573141 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 175, 33 |
| Conread position: | 145-323 |
| Cow position: | chr7:8893581-8893402 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 147-317 |
| Cow position: | chr7:48413605-48413435 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 159, 15 |
| Conread position: | 148-306 |
| Cow position: | chr7:40643465-40643622 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 162-331 |
| Cow position: | chr7:27765738-27765897 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 86 |
| Conread position: | 167-304 |
| Cow position: | chr7:49666506-49666643 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-326 |
| Cow position: | chr7:52585229-52585387 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 13 |
| Conread position: | 172-303 |
| Cow position: | chr7:53356217-53356089 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 172-314 |
| Cow position: | chr7:65519622-65519480 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 173-304 |
| Cow position: | chr7:42555498-42555631 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 174-299 |
| Cow position: | chr7:7763229-7763353 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 174-331 |
| Cow position: | chr7:3809748-3809903 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 27 |
| Conread position: | 177-312 |
| Cow position: | chr7:24883518-24883383 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 179-306 |
| Cow position: | chr7:31441620-31441497 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 179-312 |
| Cow position: | chr7:28047958-28048092 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 181-325 |
| Cow position: | chr7:9294557-9294413 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 190-304 |
| Cow position: | chr7:11188809-11188921 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 191-304 |
| Cow position: | chr7:22647776-22647661 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 193-316 |
| Cow position: | chr7:48014729-48014852 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 195-315 |
| Cow position: | chr7:38526562-38526679 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 216-314 |
| Cow position: | chr7:37259651-37259553 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.