Cow genome map
| Conread name: | Mixn-0036c18 |
| Conread position: | 1-237 |
| Cow position: | chr8:54828530-54828765 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 1-269 |
| Cow position: | chr8:53891820-53892088 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 81 |
| Conread position: | 1-270 |
| Cow position: | chr8:13630288-13630032 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 43 |
| Conread position: | 1-273 |
| Cow position: | chr8:19369202-19368954 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 1-276 |
| Cow position: | chr8:23440814-23440547 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 1-280 |
| Cow position: | chr8:4336772-4336492 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 169 |
| Conread position: | 1-290 |
| Cow position: | chr8:48682207-48681912 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 45, 154 |
| Conread position: | 1-292 |
| Cow position: | chr8:53359674-53359376 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 1-305 |
| Cow position: | chr8:18883112-18883420 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 137 |
| Conread position: | 1-310 |
| Cow position: | chr8:2974943-2975266 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 1-313 |
| Cow position: | chr8:33818945-33818638 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 32, 131 |
| Conread position: | 1-314 |
| Cow position: | chr8:7104121-7103813 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 1-314 |
| Cow position: | chr8:8480367-8480046 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 1-314 |
| Cow position: | chr8:18725504-18725809 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 1-314 |
| Cow position: | chr8:28387486-28387187 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 1-319 |
| Cow position: | chr8:45686161-45685868 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 1-320 |
| Cow position: | chr8:6507992-6507665 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 1-320 |
| Cow position: | chr8:18801525-18801842 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 1-320 |
| Cow position: | chr8:22102905-22102582 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 164 |
| Conread position: | 1-322 |
| Cow position: | chr8:5874435-5874764 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 1-323 |
| Cow position: | chr8:40273354-40273034 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 24, 158 |
| Conread position: | 1-323 |
| Cow position: | chr8:51877669-51877342 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 52, 119 |
| Conread position: | 1-324 |
| Cow position: | chr8:40432580-40432258 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 107 |
| Conread position: | 1-330 |
| Cow position: | chr8:30021635-30021315 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 2-221 |
| Cow position: | chr8:18810717-18810941 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 2-304 |
| Cow position: | chr8:33438079-33438388 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 2-313 |
| Cow position: | chr8:15870814-15870507 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 3-314 |
| Cow position: | chr8:54159033-54159342 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 3-318 |
| Cow position: | chr8:47128860-47129175 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 228 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 5-331 |
| Cow position: | chr8:14617603-14617278 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 8-314 |
| Cow position: | chr8:32720240-32720511 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 66 |
| Conread position: | 8-325 |
| Cow position: | chr8:31887947-31888241 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 9-310 |
| Cow position: | chr8:19772779-19773068 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 10-314 |
| Cow position: | chr8:10167144-10167427 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 12-306 |
| Cow position: | chr8:34439760-34440054 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 12, 128 |
| Conread position: | 12-322 |
| Cow position: | chr8:6763981-6763676 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 142 |
| Conread position: | 28-326 |
| Cow position: | chr8:9672193-9672491 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 118 |
| Conread position: | 30-312 |
| Cow position: | chr8:19793394-19793121 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 31-330 |
| Cow position: | chr8:49406393-49406117 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 63-332 |
| Cow position: | chr8:1168093-1167835 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 10 |
| Conread position: | 72-314 |
| Cow position: | chr8:19305415-19305641 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 81-322 |
| Cow position: | chr8:31185609-31185842 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 37, 103 |
| Conread position: | 93-332 |
| Cow position: | chr8:5803563-5803801 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 127 |
| Conread position: | 99-300 |
| Cow position: | chr8:57404435-57404644 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 100-325 |
| Cow position: | chr8:15822028-15822240 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 160, 28 |
| Conread position: | 105-331 |
| Cow position: | chr8:26040986-26040779 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 106-328 |
| Cow position: | chr8:32960199-32959991 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 109-330 |
| Cow position: | chr8:9986185-9986408 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 211 |
| Conread position: | 111-276 |
| Cow position: | chr8:7102487-7102649 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 112-310 |
| Cow position: | chr8:36685661-36685854 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 112-314 |
| Cow position: | chr8:32327297-32327496 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 143-310 |
| Cow position: | chr8:14703126-14702965 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 162-312 |
| Cow position: | chr8:54423320-54423171 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 162-327 |
| Cow position: | chr8:28049092-28048935 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 166-306 |
| Cow position: | chr8:21900126-21900262 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 172-310 |
| Cow position: | chr8:11794640-11794775 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 80, 61 |
| Conread position: | 191-330 |
| Cow position: | chr8:7125585-7125444 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 210-306 |
| Cow position: | chr8:32789789-32789693 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.