Cow genome map

Conread name: Mixn-0036c18

Conread position: 1-258
Cow position: chrX:4948169-4947932 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 42

Conread position: 1-271
Cow position: chrX:25106527-25106805 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 110

Conread position: 1-276
Cow position: chrX:956786-957073 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 107

Conread position: 1-279
Cow position: chrX:4597408-4597110 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 170

Conread position: 1-280
Cow position: chrX:25921477-25921215 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 39

Conread position: 1-306
Cow position: chrX:4625215-4625527 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 243

Conread position: 1-309
Cow position: chrX:11982911-11983201 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 224
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 37

Conread position: 1-310
Cow position: chrX:37236323-37236620 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 38

Conread position: 1-311
Cow position: chrX:18700050-18699741 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 90

Conread position: 1-314
Cow position: chrX:6472015-6472332 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 20

Conread position: 1-314
Cow position: chrX:20505016-20505327 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 152

Conread position: 1-318
Cow position: chrX:9910434-9910132 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 96, 37

Conread position: 1-319
Cow position: chrX:4601333-4601028 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 23, 6

Conread position: 1-321
Cow position: chrX:4440165-4440482 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 54

Conread position: 1-321
Cow position: chrX:27458424-27458109 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 164

Conread position: 1-322
Cow position: chrX:19017935-19017606 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 154

Conread position: 1-325
Cow position: chrX:25453490-25453805 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 104

Conread position: 1-328
Cow position: chrX:4631066-4630736 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 121

Conread position: 1-328
Cow position: chrX:18814477-18814813 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 15

Conread position: 1-330
Cow position: chrX:12688768-12688439 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 43, 110

Conread position: 1-330
Cow position: chrX:40353615-40353945 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 107

Conread position: 1-331
Cow position: chrX:10534389-10534720 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 23, 108

Conread position: 1-331
Cow position: chrX:13403437-13403110 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 156

Conread position: 1-332
Cow position: chrX:2147626-2147951 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 102

Conread position: 1-332
Cow position: chrX:2186568-2186900 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 1-332
Cow position: chrX:4590261-4590589 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 1-332
Cow position: chrX:11675380-11675715 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 1-332
Cow position: chrX:16816983-16817281 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 38

Conread position: 2-238
Cow position: chrX:43647445-43647207 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 14

Conread position: 2-305
Cow position: chrX:37137965-37137658 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 10

Conread position: 3-263
Cow position: chrX:2700795-2700536 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 154

Conread position: 3-309
Cow position: chrX:32456103-32456380 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 26

Conread position: 3-314
Cow position: chrX:21816579-21816888 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 21, 101

Conread position: 3-319
Cow position: chrX:19127325-19127017 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 3-328
Cow position: chrX:40698553-40698855 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 43, 87

Conread position: 10-243
Cow position: chrX:48428722-48428956 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 14, 103

Conread position: 11-315
Cow position: chrX:18467782-18468074 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 99

Conread position: 23-290
Cow position: chrX:21885776-21885501 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 40, 26

Conread position: 25-331
Cow position: chrX:1330463-1330156 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 77

Conread position: 28-310
Cow position: chrX:5956991-5956721 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 52

Conread position: 30-332
Cow position: chrX:37980726-37981029 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 15, 90

Conread position: 32-309
Cow position: chrX:4019590-4019304 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 13, 96

Conread position: 42-320
Cow position: chrX:37749004-37749284 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 73

Conread position: 43-302
Cow position: chrX:37956918-37957174 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 30

Conread position: 45-328
Cow position: chrX:38892189-38891892 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 85

Conread position: 51-331
Cow position: chrX:20957928-20958219 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 12, 79

Conread position: 53-332
Cow position: chrX:40350274-40350538 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 103, 14

Conread position: 100-314
Cow position: chrX:6672191-6672401 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 101-329
Cow position: chrX:11851352-11851137 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 222, 21

Conread position: 105-328
Cow position: chrX:23253795-23253581 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 109-306
Cow position: chrX:1427692-1427888 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 160
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 39

Conread position: 111-314
Cow position: chrX:35552769-35552961 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 111-330
Cow position: chrX:30784978-30785193 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 64, 14

Conread position: 111-331
Cow position: chrX:18518462-18518674 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 122-310
Cow position: chrX:7022535-7022711 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 41

Conread position: 147-315
Cow position: chrX:34035598-34035764 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 13

Conread position: 153-320
Cow position: chrX:25653547-25653711 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 158-320
Cow position: chrX:19391808-19391644 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 97

Conread position: 166-325
Cow position: chrX:24286534-24286688 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 172-322
Cow position: chrX:503083-502932 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 174-319
Cow position: chrX:24886313-24886169 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 175-328
Cow position: chrX:30729300-30729148 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 126, 0

Conread position: 182-318
Cow position: chrX:19216433-19216297 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 128, 60

Conread position: 182-332
Cow position: chrX:8557702-8557555 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 0

Show alignments to all cow chromosomes.