Cow genome map
Conread name: | Mixn-0036c18 |
Conread position: | 1-258 |
Cow position: | chrX:4948169-4947932 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 185 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 25, 42 |
Conread position: | 1-271 |
Cow position: | chrX:25106527-25106805 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 199 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 26, 110 |
Conread position: | 1-276 |
Cow position: | chrX:956786-957073 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 215 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 23, 107 |
Conread position: | 1-279 |
Cow position: | chrX:4597408-4597110 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 211 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 44, 170 |
Conread position: | 1-280 |
Cow position: | chrX:25921477-25921215 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 212 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 12, 39 |
Conread position: | 1-306 |
Cow position: | chrX:4625215-4625527 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 243 |
Conread position: | 1-309 |
Cow position: | chrX:11982911-11983201 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 224 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 23, 37 |
Conread position: | 1-310 |
Cow position: | chrX:37236323-37236620 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 38 |
Conread position: | 1-311 |
Cow position: | chrX:18700050-18699741 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 230 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 23, 90 |
Conread position: | 1-314 |
Cow position: | chrX:6472015-6472332 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 20 |
Conread position: | 1-314 |
Cow position: | chrX:20505016-20505327 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 152 |
Conread position: | 1-318 |
Cow position: | chrX:9910434-9910132 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 229 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 96, 37 |
Conread position: | 1-319 |
Cow position: | chrX:4601333-4601028 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 236 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 23, 6 |
Conread position: | 1-321 |
Cow position: | chrX:4440165-4440482 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 54 |
Conread position: | 1-321 |
Cow position: | chrX:27458424-27458109 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 238 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 29, 164 |
Conread position: | 1-322 |
Cow position: | chrX:19017935-19017606 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 154 |
Conread position: | 1-325 |
Cow position: | chrX:25453490-25453805 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 104 |
Conread position: | 1-328 |
Cow position: | chrX:4631066-4630736 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 121 |
Conread position: | 1-328 |
Cow position: | chrX:18814477-18814813 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 15 |
Conread position: | 1-330 |
Cow position: | chrX:12688768-12688439 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 238 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 43, 110 |
Conread position: | 1-330 |
Cow position: | chrX:40353615-40353945 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 107 |
Conread position: | 1-331 |
Cow position: | chrX:10534389-10534720 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 237 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 23, 108 |
Conread position: | 1-331 |
Cow position: | chrX:13403437-13403110 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 156 |
Conread position: | 1-332 |
Cow position: | chrX:2147626-2147951 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 102 |
Conread position: | 1-332 |
Cow position: | chrX:2186568-2186900 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 37 |
Conread position: | 1-332 |
Cow position: | chrX:4590261-4590589 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 17 |
Conread position: | 1-332 |
Cow position: | chrX:11675380-11675715 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 37 |
Conread position: | 1-332 |
Cow position: | chrX:16816983-16817281 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 247 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 23, 38 |
Conread position: | 2-238 |
Cow position: | chrX:43647445-43647207 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 177 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 21, 14 |
Conread position: | 2-305 |
Cow position: | chrX:37137965-37137658 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 216 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 22, 10 |
Conread position: | 3-263 |
Cow position: | chrX:2700795-2700536 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 188 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 25, 154 |
Conread position: | 3-309 |
Cow position: | chrX:32456103-32456380 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 208 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 20, 26 |
Conread position: | 3-314 |
Cow position: | chrX:21816579-21816888 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 227 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 21, 101 |
Conread position: | 3-319 |
Cow position: | chrX:19127325-19127017 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 104 |
Conread position: | 3-328 |
Cow position: | chrX:40698553-40698855 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 239 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 43, 87 |
Conread position: | 10-243 |
Cow position: | chrX:48428722-48428956 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 172 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 14, 103 |
Conread position: | 11-315 |
Cow position: | chrX:18467782-18468074 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 225 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 13, 99 |
Conread position: | 23-290 |
Cow position: | chrX:21885776-21885501 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 206 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 40, 26 |
Conread position: | 25-331 |
Cow position: | chrX:1330463-1330156 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 77 |
Conread position: | 28-310 |
Cow position: | chrX:5956991-5956721 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 200 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 18, 52 |
Conread position: | 30-332 |
Cow position: | chrX:37980726-37981029 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 227 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 15, 90 |
Conread position: | 32-309 |
Cow position: | chrX:4019590-4019304 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 202 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 13, 96 |
Conread position: | 42-320 |
Cow position: | chrX:37749004-37749284 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 203 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 52, 73 |
Conread position: | 43-302 |
Cow position: | chrX:37956918-37957174 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 188 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 41, 30 |
Conread position: | 45-328 |
Cow position: | chrX:38892189-38891892 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 211 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 21, 85 |
Conread position: | 51-331 |
Cow position: | chrX:20957928-20958219 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 211 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 12, 79 |
Conread position: | 53-332 |
Cow position: | chrX:40350274-40350538 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 200 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 103, 14 |
Conread position: | 100-314 |
Cow position: | chrX:6672191-6672401 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 101-329 |
Cow position: | chrX:11851352-11851137 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 173 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 222, 21 |
Conread position: | 105-328 |
Cow position: | chrX:23253795-23253581 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 166 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 109-306 |
Cow position: | chrX:1427692-1427888 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 160 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 39 |
Conread position: | 111-314 |
Cow position: | chrX:35552769-35552961 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 158 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 111-330 |
Cow position: | chrX:30784978-30785193 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 159 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 64, 14 |
Conread position: | 111-331 |
Cow position: | chrX:18518462-18518674 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 173 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 122-310 |
Cow position: | chrX:7022535-7022711 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 140 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 26, 41 |
Conread position: | 147-315 |
Cow position: | chrX:34035598-34035764 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 8, 13 |
Conread position: | 153-320 |
Cow position: | chrX:25653547-25653711 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 158-320 |
Cow position: | chrX:19391808-19391644 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 135 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 11, 97 |
Conread position: | 166-325 |
Cow position: | chrX:24286534-24286688 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 172-322 |
Cow position: | chrX:503083-502932 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 119 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 140, 0 |
Conread position: | 174-319 |
Cow position: | chrX:24886313-24886169 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 175-328 |
Cow position: | chrX:30729300-30729148 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 126, 0 |
Conread position: | 182-318 |
Cow position: | chrX:19216433-19216297 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 128, 60 |
Conread position: | 182-332 |
Cow position: | chrX:8557702-8557555 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 113 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 112, 0 |
Show alignments to all cow chromosomes.