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Cow genome map

           
Conread name:
           
Mus1-POSM0100014_A02F
        

               
Conread position:
               
5-463
               

               
Cow position:
               
chr13:20378555-20378112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
6-479
               

               
Cow position:
               
chr13:22115443-22115943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 106
               

               
Conread position:
               
11-494
               

               
Cow position:
               
chr13:26262017-26261539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 21
               

               
Conread position:
               
12-351
               

               
Cow position:
               
chr13:20137589-20137939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
12-451
               

               
Cow position:
               
chr13:32282900-32283339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
12-485
               

               
Cow position:
               
chr13:57002496-57002985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
12-490
               

               
Cow position:
               
chr13:17159108-17158615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
13-281
               

               
Cow position:
               
chr13:585099-584827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
13-341
               

               
Cow position:
               
chr13:620473-620156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
13-359
               

               
Cow position:
               
chr13:54128823-54128466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
13-365
               

               
Cow position:
               
chr13:11201813-11202158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
13-386
               

               
Cow position:
               
chr13:54389243-54388874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
13-397
               

               
Cow position:
               
chr13:9899921-9900307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 149
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr13:49023091-49022695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
43, 83
               

               
Conread position:
               
13-460
               

               
Cow position:
               
chr13:14927028-14927460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
13-477
               

               
Cow position:
               
chr13:15868883-15869357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
13-478
               

               
Cow position:
               
chr13:34281456-34281919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr13:52893923-52894382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 57
               

               
Conread position:
               
13-485
               

               
Cow position:
               
chr13:8362972-8362500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
13-489
               

               
Cow position:
               
chr13:43595330-43594866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 94
               

               
Conread position:
               
13-492
               

               
Cow position:
               
chr13:26480427-26479961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 23
               

               
Conread position:
               
13-492
               

               
Cow position:
               
chr13:32017736-32017270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
13-494
               

               
Cow position:
               
chr13:9142054-9142535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 22
               

               
Conread position:
               
13-494
               

               
Cow position:
               
chr13:12449206-12448737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 48
               

               
Conread position:
               
14-414
               

               
Cow position:
               
chr13:49503762-49503353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
42, 205
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr13:2773891-2774346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 150
               

               
Conread position:
               
14-479
               

               
Cow position:
               
chr13:16247420-16247893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 97
               

               
Conread position:
               
14-489
               

               
Cow position:
               
chr13:14063745-14063278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
15-249
               

               
Cow position:
               
chr13:14795983-14796215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
15-386
               

               
Cow position:
               
chr13:17569320-17568952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
71, 40
               

               
Conread position:
               
15-441
               

               
Cow position:
               
chr13:52055816-52055393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 80
               

               
Conread position:
               
15-477
               

               
Cow position:
               
chr13:21275633-21276093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
15-486
               

               
Cow position:
               
chr13:52283688-52284156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
15-489
               

               
Cow position:
               
chr13:60509348-60508866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
15-490
               

               
Cow position:
               
chr13:311209-311681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
15-493
               

               
Cow position:
               
chr13:35659531-35660007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
16-247
               

               
Cow position:
               
chr13:16907991-16908224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
36, 97
               

               
Conread position:
               
16-345
               

               
Cow position:
               
chr13:46329826-46329496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr13:10220735-10221058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 93
               

               
Conread position:
               
16-399
               

               
Cow position:
               
chr13:45593701-45594064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
16-477
               

               
Cow position:
               
chr13:14543913-14544360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 42
               

               
Conread position:
               
16-479
               

               
Cow position:
               
chr13:23961029-23960566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
16-479
               

               
Cow position:
               
chr13:25926566-25927032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
16-480
               

               
Cow position:
               
chr13:12989640-12990086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
226, 40
               

               
Conread position:
               
16-483
               

               
Cow position:
               
chr13:9587804-9587340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 35
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr13:6183652-6183408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 193
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr13:15996815-15997046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
17-294
               

               
Cow position:
               
chr13:1147367-1147091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
17-305
               

               
Cow position:
               
chr13:55161989-55162280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
17-358
               

               
Cow position:
               
chr13:14575994-14576325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
17-373
               

               
Cow position:
               
chr13:25579411-25579053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
17-382
               

               
Cow position:
               
chr13:18973671-18973297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 105
               

               
Conread position:
               
17-408
               

               
Cow position:
               
chr13:29831648-29831265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
17-411
               

               
Cow position:
               
chr13:49823802-49824199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
17-451
               

               
Cow position:
               
chr13:60340582-60341026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
17-457
               

               
Cow position:
               
chr13:31581959-31581528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
17-461
               

               
Cow position:
               
chr13:40490996-40491455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
17-470
               

               
Cow position:
               
chr13:12045567-12045104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr13:6616984-6616508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr13:8194875-8195322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr13:10925144-10924666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr13:12876197-12875745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr13:19883255-19882796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 42
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr13:45352806-45353282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
17-483
               

               
Cow position:
               
chr13:18166511-18166974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
17-483
               

               
Cow position:
               
chr13:19033334-19033792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
17-490
               

               
Cow position:
               
chr13:20880046-20879584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr13:28536541-28536321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr13:17823171-17822888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
18-306
               

               
Cow position:
               
chr13:42672650-42672352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
18-362
               

               
Cow position:
               
chr13:5911111-5910773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
18-385
               

               
Cow position:
               
chr13:6848704-6849076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
18-409
               

               
Cow position:
               
chr13:9800301-9800669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
18-457
               

               
Cow position:
               
chr13:7059238-7059693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 103
               

               
Conread position:
               
18-460
               

               
Cow position:
               
chr13:18851868-18852297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
185, 38
               

               
Conread position:
               
18-475
               

               
Cow position:
               
chr13:19393076-19393523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
18-479
               

               
Cow position:
               
chr13:972117-971658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
18-479
               

               
Cow position:
               
chr13:42113795-42114261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
18-485
               

               
Cow position:
               
chr13:3315906-3315427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 326
               

               
Conread position:
               
18-485
               

               
Cow position:
               
chr13:19024072-19023593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
19-231
               

               
Cow position:
               
chr13:43788067-43787846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
19-231
               

               
Cow position:
               
chr13:43839906-43839685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
19-300
               

               
Cow position:
               
chr13:62007888-62008176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
19-321
               

               
Cow position:
               
chr13:27180818-27181115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
19-439
               

               
Cow position:
               
chr13:37775425-37775027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
56, 37
               

               
Conread position:
               
19-453
               

               
Cow position:
               
chr13:6973943-6974374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
19-457
               

               
Cow position:
               
chr13:11060755-11061205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 266
               

               
Conread position:
               
20-241
               

               
Cow position:
               
chr13:13775471-13775242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 154
               

               
Conread position:
               
20-393
               

               
Cow position:
               
chr13:18999312-18999696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
20-424
               

               
Cow position:
               
chr13:47186012-47186409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
20-489
               

               
Cow position:
               
chr13:48252186-48251742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
21-384
               

               
Cow position:
               
chr13:18058464-18058104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
21-400
               

               
Cow position:
               
chr13:54582657-54583037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
21-429
               

               
Cow position:
               
chr13:15195418-15195019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
21-479
               

               
Cow position:
               
chr13:15621592-15622047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
21-479
               

               
Cow position:
               
chr13:25695984-25695528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 34
               

               
Conread position:
               
21-479
               

               
Cow position:
               
chr13:54701964-54702430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
21-480
               

               
Cow position:
               
chr13:17292345-17291890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
22-249
               

               
Cow position:
               
chr13:47243768-47243546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
22-445
               

               
Cow position:
               
chr13:19022048-19022484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 326
               

               
Conread position:
               
22-477
               

               
Cow position:
               
chr13:42200404-42200856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
22-485
               

               
Cow position:
               
chr13:46515843-46516311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
22-489
               

               
Cow position:
               
chr13:17977126-17977578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
32, 146
               

               
Conread position:
               
23-305
               

               
Cow position:
               
chr13:6860960-6861251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
23-355
               

               
Cow position:
               
chr13:21136127-21135784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
30, 326
               

               
Conread position:
               
23-443
               

               
Cow position:
               
chr13:19223436-19223853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
24-460
               

               
Cow position:
               
chr13:9906514-9906964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
31, 89
               

               
Conread position:
               
26-354
               

               
Cow position:
               
chr13:8667403-8667734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
29-465
               

               
Cow position:
               
chr13:33054582-33054169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
31-249
               

               
Cow position:
               
chr13:8699950-8699728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
31-250
               

               
Cow position:
               
chr13:44003492-44003709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
31-252
               

               
Cow position:
               
chr13:42640173-42640394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
31-273
               

               
Cow position:
               
chr13:6926309-6926546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 15
               

               
Conread position:
               
31-421
               

               
Cow position:
               
chr13:5758539-5758163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
31-443
               

               
Cow position:
               
chr13:37593153-37592734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
31-448
               

               
Cow position:
               
chr13:151763-152160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
31-479
               

               
Cow position:
               
chr13:10989281-10988834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
31-490
               

               
Cow position:
               
chr13:61977165-61976714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
32-483
               

               
Cow position:
               
chr13:27525465-27525018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 35
               

               
Conread position:
               
34-479
               

               
Cow position:
               
chr13:37985952-37985511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
37-370
               

               
Cow position:
               
chr13:39423626-39423952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
48-338
               

               
Cow position:
               
chr13:15659088-15659378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
52-463
               

               
Cow position:
               
chr13:42229118-42229552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
52-479
               

               
Cow position:
               
chr13:33256314-33256736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
52-484
               

               
Cow position:
               
chr13:5279389-5278943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 54
               

               
Conread position:
               
55-369
               

               
Cow position:
               
chr13:18929345-18929661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
58-348
               

               
Cow position:
               
chr13:49475894-49476197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
58-462
               

               
Cow position:
               
chr13:43919443-43919031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
61-439
               

               
Cow position:
               
chr13:24230035-24230413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
79-479
               

               
Cow position:
               
chr13:47756204-47756615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 10
               

               
Conread position:
               
80-378
               

               
Cow position:
               
chr13:11321776-11321477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
116, 8
               

               
Conread position:
               
80-491
               

               
Cow position:
               
chr13:24715082-24715487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 10
               

               
Conread position:
               
83-305
               

               
Cow position:
               
chr13:7149665-7149444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 7
               

               
Conread position:
               
83-492
               

               
Cow position:
               
chr13:20562838-20563251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 10
               

               
Conread position:
               
84-318
               

               
Cow position:
               
chr13:17837795-17838030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
165, 34
               

               
Conread position:
               
85-485
               

               
Cow position:
               
chr13:20666541-20666142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 109
               

               
Conread position:
               
87-304
               

               
Cow position:
               
chr13:17563587-17563804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
160, 49
               

               
Conread position:
               
87-337
               

               
Cow position:
               
chr13:55727749-55728001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
87-420
               

               
Cow position:
               
chr13:11643788-11644114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
87-461
               

               
Cow position:
               
chr13:20679186-20679567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
155, 315
               

               
Conread position:
               
87-478
               

               
Cow position:
               
chr13:56148368-56148778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 267
               

               
Conread position:
               
87-478
               

               
Cow position:
               
chr13:56160599-56160189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 267
               

               
Conread position:
               
88-439
               

               
Cow position:
               
chr13:52749620-52749288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
88-479
               

               
Cow position:
               
chr13:38873096-38872732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
88-490
               

               
Cow position:
               
chr13:23856057-23856466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
89-354
               

               
Cow position:
               
chr13:16038434-16038175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
262, 16
               

               
Conread position:
               
89-477
               

               
Cow position:
               
chr13:25817378-25817751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 31
               

               
Conread position:
               
89-490
               

               
Cow position:
               
chr13:1231491-1231899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
90-388
               

               
Cow position:
               
chr13:43829093-43829401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 259
               

               
Conread position:
               
90-457
               

               
Cow position:
               
chr13:37818901-37818542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
163, 86
               

               
Conread position:
               
92-286
               

               
Cow position:
               
chr13:52641096-52640900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 108
               

               
Conread position:
               
92-342
               

               
Cow position:
               
chr13:1568784-1569029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
165, 93
               

               
Conread position:
               
92-384
               

               
Cow position:
               
chr13:49520971-49520677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
92-408
               

               
Cow position:
               
chr13:6442252-6441932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
159, 7
               

               
Conread position:
               
92-418
               

               
Cow position:
               
chr13:14016707-14016386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
92-455
               

               
Cow position:
               
chr13:37521890-37521516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
92-457
               

               
Cow position:
               
chr13:11096034-11096390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 53
               

               
Conread position:
               
92-476
               

               
Cow position:
               
chr13:25547730-25547356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
371, 247
               

               
Conread position:
               
92-479
               

               
Cow position:
               
chr13:16014663-16015047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 186
               

               
Conread position:
               
92-479
               

               
Cow position:
               
chr13:20174594-20174979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
119, 10
               

               
Conread position:
               
92-483
               

               
Cow position:
               
chr13:12547056-12546663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 248
               

               
Conread position:
               
92-485
               

               
Cow position:
               
chr13:60430225-60429833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 18
               

               
Conread position:
               
92-491
               

               
Cow position:
               
chr13:18172190-18172593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 28
               

               
Conread position:
               
92-494
               

               
Cow position:
               
chr13:2413883-2414280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 20
               

               
Conread position:
               
93-287
               

               
Cow position:
               
chr13:24110333-24110537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
93-382
               

               
Cow position:
               
chr13:11381871-11381579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 204
               

               
Conread position:
               
93-463
               

               
Cow position:
               
chr13:8609694-8609323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 90
               

               
Conread position:
               
94-263
               

               
Cow position:
               
chr13:19750569-19750738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 75
               

               
Conread position:
               
94-337
               

               
Cow position:
               
chr13:19278946-19279193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
94-378
               

               
Cow position:
               
chr13:51116171-51115889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 191
               

               
Conread position:
               
94-386
               

               
Cow position:
               
chr13:18696693-18696989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
94-390
               

               
Cow position:
               
chr13:37640446-37640737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
94-400
               

               
Cow position:
               
chr13:25604753-25604466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
249, 36
               

               
Conread position:
               
94-440
               

               
Cow position:
               
chr13:15282078-15281735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
94-460
               

               
Cow position:
               
chr13:17439914-17439545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
159, 97
               

               
Conread position:
               
94-461
               

               
Cow position:
               
chr13:51822018-51821670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 24
               

               
Conread position:
               
94-475
               

               
Cow position:
               
chr13:55316341-55315953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
94-479
               

               
Cow position:
               
chr13:12925631-12926030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
94-479
               

               
Cow position:
               
chr13:23167247-23166857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
94-483
               

               
Cow position:
               
chr13:51901438-51901856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
95-403
               

               
Cow position:
               
chr13:17498071-17498395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
101, 106
               

               
Conread position:
               
95-445
               

               
Cow position:
               
chr13:46111822-46112173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
95-493
               

               
Cow position:
               
chr13:38329471-38329883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 250
               

               
Conread position:
               
95-494
               

               
Cow position:
               
chr13:7663569-7663176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 199
               

               
Conread position:
               
96-479
               

               
Cow position:
               
chr13:23478886-23479269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 170
               

               
Conread position:
               
98-330
               

               
Cow position:
               
chr13:56035001-56034765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
169, 98
               

               
Conread position:
               
98-490
               

               
Cow position:
               
chr13:60973938-60974326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
99-252
               

               
Cow position:
               
chr13:20519920-20520073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-333
               

               
Cow position:
               
chr13:19778991-19778751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 147
               

               
Conread position:
               
102-430
               

               
Cow position:
               
chr13:21283842-21283515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 87
               

               
Conread position:
               
102-466
               

               
Cow position:
               
chr13:15193024-15192667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 97
               

               
Conread position:
               
103-490
               

               
Cow position:
               
chr13:11460495-11460874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
107-368
               

               
Cow position:
               
chr13:11591618-11591875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
107-479
               

               
Cow position:
               
chr13:13176516-13176889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 234
               

               
Conread position:
               
109-298
               

               
Cow position:
               
chr13:25428354-25428165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
105, 116
               

               
Conread position:
               
109-399
               

               
Cow position:
               
chr13:27493988-27493691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
109-420
               

               
Cow position:
               
chr13:19188170-19188485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 233
               

               
Conread position:
               
109-480
               

               
Cow position:
               
chr13:55674339-55673964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 229
               

               
Conread position:
               
109-489
               

               
Cow position:
               
chr13:4664988-4664611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 130
               

               
Conread position:
               
110-236
               

               
Cow position:
               
chr13:21294945-21295071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-327
               

               
Cow position:
               
chr13:3211419-3211642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
110-329
               

               
Cow position:
               
chr13:53330142-53330364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
28, 150
               

               
Conread position:
               
110-369
               

               
Cow position:
               
chr13:6389266-6389510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
171, 68
               

               
Conread position:
               
110-388
               

               
Cow position:
               
chr13:39367829-39368104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 183
               

               
Conread position:
               
110-425
               

               
Cow position:
               
chr13:14771321-14771647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
110-430
               

               
Cow position:
               
chr13:15991361-15991031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
110-438
               

               
Cow position:
               
chr13:26369394-26369725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 64
               

               
Conread position:
               
110-457
               

               
Cow position:
               
chr13:9975206-9974850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 237
               

               
Conread position:
               
110-460
               

               
Cow position:
               
chr13:34261101-34261453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 236
               

               
Conread position:
               
110-462
               

               
Cow position:
               
chr13:18491466-18491817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 202
               

               
Conread position:
               
110-478
               

               
Cow position:
               
chr13:48037493-48037859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 81
               

               
Conread position:
               
110-478
               

               
Cow position:
               
chr13:56686304-56686666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
110-478
               

               
Cow position:
               
chr13:60966639-60967003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 188
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr13:7076127-7076496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 105
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr13:37381671-37382051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 149
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr13:40722837-40722470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 144
               

               
Conread position:
               
110-485
               

               
Cow position:
               
chr13:43762039-43762413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 14
               

               
Conread position:
               
110-490
               

               
Cow position:
               
chr13:36771550-36771173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
110-492
               

               
Cow position:
               
chr13:21176449-21176071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 35
               

               
Conread position:
               
111-357
               

               
Cow position:
               
chr13:13533793-13533549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
111-480
               

               
Cow position:
               
chr13:20466414-20466054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
122, 104
               

               
Conread position:
               
111-485
               

               
Cow position:
               
chr13:23270334-23269967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 85
               

               
Conread position:
               
112-358
               

               
Cow position:
               
chr13:18994998-18995247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
112-419
               

               
Cow position:
               
chr13:6540443-6540133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
123, 12
               

               
Conread position:
               
112-457
               

               
Cow position:
               
chr13:20839438-20839785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 135
               

               
Conread position:
               
112-462
               

               
Cow position:
               
chr13:54094682-54095028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 221
               

               
Conread position:
               
112-469
               

               
Cow position:
               
chr13:12206920-12207273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
112-478
               

               
Cow position:
               
chr13:11260147-11260491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
136, 78
               

               
Conread position:
               
112-478
               

               
Cow position:
               
chr13:25435251-25434890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
112-479
               

               
Cow position:
               
chr13:1958880-1959249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
112-479
               

               
Cow position:
               
chr13:24753759-24754124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 142
               

               
Conread position:
               
112-479
               

               
Cow position:
               
chr13:37484407-37484030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 187
               

               
Conread position:
               
112-479
               

               
Cow position:
               
chr13:37981872-37981515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
135, 75
               

               
Conread position:
               
112-479
               

               
Cow position:
               
chr13:53566473-53566836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
112-484
               

               
Cow position:
               
chr13:20881056-20880681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
112-485
               

               
Cow position:
               
chr13:28683234-28683604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 182
               

               
Conread position:
               
112-488
               

               
Cow position:
               
chr13:52586165-52585772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 237
               

               
Conread position:
               
112-493
               

               
Cow position:
               
chr13:20784462-20784844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
135, 192
               

               
Conread position:
               
113-285
               

               
Cow position:
               
chr13:8232875-8233044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
141, 83
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr13:827118-827314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
144, 87
               

               
Conread position:
               
113-350
               

               
Cow position:
               
chr13:49457557-49457785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
183, 100
               

               
Conread position:
               
113-483
               

               
Cow position:
               
chr13:51940607-51940973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 232
               

               
Conread position:
               
113-489
               

               
Cow position:
               
chr13:9664932-9665325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
113-490
               

               
Cow position:
               
chr13:6079539-6079168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 82
               

               
Conread position:
               
113-494
               

               
Cow position:
               
chr13:32717992-32717618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
114-384
               

               
Cow position:
               
chr13:17966335-17966064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
114-476
               

               
Cow position:
               
chr13:43185007-43184635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 234
               

               
Conread position:
               
114-489
               

               
Cow position:
               
chr13:52284690-52285065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 24
               

               
Conread position:
               
114-493
               

               
Cow position:
               
chr13:38278273-38277883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 16
               

               
Conread position:
               
114-494
               

               
Cow position:
               
chr13:4552692-4553052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
117-354
               

               
Cow position:
               
chr13:19240308-19240553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
118-280
               

               
Cow position:
               
chr13:51857007-51856842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
118-470
               

               
Cow position:
               
chr13:32657922-32657575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 115
               

               
Conread position:
               
120-460
               

               
Cow position:
               
chr13:10845484-10845814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
121-353
               

               
Cow position:
               
chr13:56677896-56678129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
144, 54
               

               
Conread position:
               
121-411
               

               
Cow position:
               
chr13:20473801-20473515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
136, 210
               

               
Conread position:
               
121-436
               

               
Cow position:
               
chr13:8652561-8652240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 236
               

               
Conread position:
               
121-439
               

               
Cow position:
               
chr13:15529156-15528828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
40, 227
               

               
Conread position:
               
121-443
               

               
Cow position:
               
chr13:9593387-9593711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
121-457
               

               
Cow position:
               
chr13:45074033-45073717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
121-461
               

               
Cow position:
               
chr13:17745129-17745461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
133, 48
               

               
Conread position:
               
121-475
               

               
Cow position:
               
chr13:46736096-46736437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
121-477
               

               
Cow position:
               
chr13:6061127-6060770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
121-479
               

               
Cow position:
               
chr13:15974498-15974850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
121-479
               

               
Cow position:
               
chr13:43139333-43138989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
121-479
               

               
Cow position:
               
chr13:45725772-45726119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
121-483
               

               
Cow position:
               
chr13:8524737-8524377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 201
               

               
Conread position:
               
121-483
               

               
Cow position:
               
chr13:22085865-22085513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
128, 220
               

               
Conread position:
               
121-485
               

               
Cow position:
               
chr13:18835085-18835432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
121-490
               

               
Cow position:
               
chr13:17821389-17821009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 220
               

               
Conread position:
               
122-479
               

               
Cow position:
               
chr13:12614135-12614500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 65
               

               
Conread position:
               
123-460
               

               
Cow position:
               
chr13:13465883-13465569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
123-494
               

               
Cow position:
               
chr13:47007835-47007485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
124-460
               

               
Cow position:
               
chr13:43869229-43868897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
125, 198
               

               
Conread position:
               
124-461
               

               
Cow position:
               
chr13:61990440-61990111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 21
               

               
Conread position:
               
124-470
               

               
Cow position:
               
chr13:49804861-49805205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
132, 46
               

               
Conread position:
               
124-471
               

               
Cow position:
               
chr13:47964297-47963969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
124-488
               

               
Cow position:
               
chr13:15885138-15884765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 221
               

               
Conread position:
               
124-491
               

               
Cow position:
               
chr13:6153899-6153525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 6
               

               
Conread position:
               
124-493
               

               
Cow position:
               
chr13:17622173-17622538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 13
               

               
Conread position:
               
125-413
               

               
Cow position:
               
chr13:15110199-15110498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
128, 223
               

               
Conread position:
               
125-457
               

               
Cow position:
               
chr13:12282711-12283056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
125-489
               

               
Cow position:
               
chr13:9246617-9246964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
71, 44
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr13:47322524-47322291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 222
               

               
Conread position:
               
126-461
               

               
Cow position:
               
chr13:9643999-9643663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
126-462
               

               
Cow position:
               
chr13:46181678-46182011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 216
               

               
Conread position:
               
127-494
               

               
Cow position:
               
chr13:45023322-45022953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 64
               

               
Conread position:
               
131-477
               

               
Cow position:
               
chr13:52879293-52879648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
131-489
               

               
Cow position:
               
chr13:16343585-16343936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 47
               

               
Conread position:
               
132-490
               

               
Cow position:
               
chr13:18243754-18244107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 210
               

               
Conread position:
               
136-397
               

               
Cow position:
               
chr13:62600903-62601163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
117, 199
               

               
Conread position:
               
137-483
               

               
Cow position:
               
chr13:1043073-1042712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 210
               

               
Conread position:
               
138-295
               

               
Cow position:
               
chr13:19183766-19183925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 62
               

               
Conread position:
               
138-398
               

               
Cow position:
               
chr13:19582185-19581928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
138-426
               

               
Cow position:
               
chr13:2404652-2404930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
87, 56
               

               
Conread position:
               
138-468
               

               
Cow position:
               
chr13:20650089-20649754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 250
               

               
Conread position:
               
138-488
               

               
Cow position:
               
chr13:8201585-8201236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 77
               

               
Conread position:
               
139-328
               

               
Cow position:
               
chr13:16187997-16187806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
114, 186
               

               
Conread position:
               
140-362
               

               
Cow position:
               
chr13:50713110-50713325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
110, 115
               

               
Conread position:
               
140-369
               

               
Cow position:
               
chr13:25380863-25381092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
115, 200
               

               
Conread position:
               
140-438
               

               
Cow position:
               
chr13:23512270-23512558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
117, 92
               

               
Conread position:
               
142-421
               

               
Cow position:
               
chr13:7488443-7488725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
143-330
               

               
Cow position:
               
chr13:50751153-50750960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 103
               

               
Conread position:
               
143-373
               

               
Cow position:
               
chr13:14879048-14878818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 103
               

               
Conread position:
               
143-386
               

               
Cow position:
               
chr13:1363597-1363841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
97, 124
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr13:6930818-6931063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
97, 169
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr13:13238480-13238725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
143-387
               

               
Cow position:
               
chr13:17450999-17451242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
110, 168
               

               
Conread position:
               
143-405
               

               
Cow position:
               
chr13:28689370-28689636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 178
               

               
Conread position:
               
143-414
               

               
Cow position:
               
chr13:607355-607086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
253, 96
               

               
Conread position:
               
143-414
               

               
Cow position:
               
chr13:13338759-13339039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
143-414
               

               
Cow position:
               
chr13:17338332-17338609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
102, 238
               

               
Conread position:
               
143-430
               

               
Cow position:
               
chr13:7032195-7032482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
98, 135
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr13:51015275-51014966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
143-453
               

               
Cow position:
               
chr13:52228197-52227886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 109
               

               
Conread position:
               
143-461
               

               
Cow position:
               
chr13:46324885-46324569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:30651091-30651415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 58
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:33875578-33875902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 104
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:34035270-34035608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
95, 49
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:34507789-34508116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 109
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:40651837-40652173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 103
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:60600028-60599702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 103
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr13:61047117-61047446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
143-483
               

               
Cow position:
               
chr13:20814367-20814036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 104
               

               
Conread position:
               
143-483
               

               
Cow position:
               
chr13:20816226-20816557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 104
               

               
Conread position:
               
143-490
               

               
Cow position:
               
chr13:44626272-44626629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
53, 10
               

               
Conread position:
               
143-491
               

               
Cow position:
               
chr13:32950089-32949749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
97, 104
               

               
Conread position:
               
143-493
               

               
Cow position:
               
chr13:42860667-42860314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
143-494
               

               
Cow position:
               
chr13:45604513-45604163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
91, 158
               

               
Conread position:
               
144-379
               

               
Cow position:
               
chr13:21269678-21269440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
144-479
               

               
Cow position:
               
chr13:15233830-15234150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
145-470
               

               
Cow position:
               
chr13:11955212-11954883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 206
               

               
Conread position:
               
147-440
               

               
Cow position:
               
chr13:61188440-61188736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
119, 266
               

               
Conread position:
               
147-483
               

               
Cow position:
               
chr13:15445944-15446290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 10
               

               
Conread position:
               
148-394
               

               
Cow position:
               
chr13:52929619-52929864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 53
               

               
Conread position:
               
148-479
               

               
Cow position:
               
chr13:17613248-17613586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
149-480
               

               
Cow position:
               
chr13:34941741-34941416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
56, 113
               

               
Conread position:
               
160-403
               

               
Cow position:
               
chr13:49507930-49507686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
97, 183
               

               
Conread position:
               
160-494
               

               
Cow position:
               
chr13:6835875-6835558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
162-405
               

               
Cow position:
               
chr13:13954471-13954222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
162-419
               

               
Cow position:
               
chr13:39232903-39232659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 84
               

               
Conread position:
               
162-491
               

               
Cow position:
               
chr13:31808443-31808766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
165-457
               

               
Cow position:
               
chr13:21039674-21039380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 31
               

               
Conread position:
               
165-477
               

               
Cow position:
               
chr13:26383310-26382993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 94
               

               
Conread position:
               
166-463
               

               
Cow position:
               
chr13:54381994-54381710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
166-477
               

               
Cow position:
               
chr13:12977501-12977800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
166-479
               

               
Cow position:
               
chr13:17855298-17855614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 157
               

               
Conread position:
               
166-491
               

               
Cow position:
               
chr13:21155574-21155237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
30, 184
               

               
Conread position:
               
166-494
               

               
Cow position:
               
chr13:34375185-34375508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
169-461
               

               
Cow position:
               
chr13:37795387-37795656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
169-477
               

               
Cow position:
               
chr13:41253550-41253852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 169
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr13:24376422-24376730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
169-479
               

               
Cow position:
               
chr13:53536379-53536066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
170-387
               

               
Cow position:
               
chr13:53070230-53070022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
172-489
               

               
Cow position:
               
chr13:52922030-52922338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
173-490
               

               
Cow position:
               
chr13:4037827-4038131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
175-409
               

               
Cow position:
               
chr13:4420277-4420517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr13:20128602-20128825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
76, 166
               

               
Conread position:
               
176-421
               

               
Cow position:
               
chr13:56605542-56605288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 150
               

               
Conread position:
               
176-453
               

               
Cow position:
               
chr13:53195345-53195078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
176-475
               

               
Cow position:
               
chr13:2463299-2462995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 209
               

               
Conread position:
               
176-484
               

               
Cow position:
               
chr13:16024525-16024833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 168
               

               
Conread position:
               
176-494
               

               
Cow position:
               
chr13:25531854-25531537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
178-377
               

               
Cow position:
               
chr13:10099050-10098853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 68
               

               
Conread position:
               
178-453
               

               
Cow position:
               
chr13:2192649-2192922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 175
               

               
Conread position:
               
179-400
               

               
Cow position:
               
chr13:14870471-14870690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
183-479
               

               
Cow position:
               
chr13:37521433-37521140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
183-489
               

               
Cow position:
               
chr13:30693657-30693951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 114
               

               
Conread position:
               
188-404
               

               
Cow position:
               
chr13:20264951-20264746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
188-487
               

               
Cow position:
               
chr13:16269883-16270183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
147, 66
               

               
Conread position:
               
191-480
               

               
Cow position:
               
chr13:20682900-20683187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
193-485
               

               
Cow position:
               
chr13:1011284-1011578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
188, 76
               

               
Conread position:
               
200-380
               

               
Cow position:
               
chr13:28696045-28696222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
200-471
               

               
Cow position:
               
chr13:30026069-30026345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 185
               

               
Conread position:
               
200-479
               

               
Cow position:
               
chr13:19178232-19178516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
201-386
               

               
Cow position:
               
chr13:16711588-16711777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
201-420
               

               
Cow position:
               
chr13:62474838-62474618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
202-448
               

               
Cow position:
               
chr13:16834113-16833869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
49, 191
               

               
Conread position:
               
206-456
               

               
Cow position:
               
chr13:47312883-47313124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 98
               

               
Conread position:
               
206-489
               

               
Cow position:
               
chr13:5752462-5752173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
207-477
               

               
Cow position:
               
chr13:41155067-41154808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 138
               

               
Conread position:
               
208-467
               

               
Cow position:
               
chr13:13504274-13504015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
156, 50
               

               
Conread position:
               
208-478
               

               
Cow position:
               
chr13:61170750-61170477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 133
               

               
Conread position:
               
211-471
               

               
Cow position:
               
chr13:54093716-54093972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 131
               

               
Conread position:
               
212-407
               

               
Cow position:
               
chr13:22030068-22030256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
212-474
               

               
Cow position:
               
chr13:18551421-18551683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 16
               

               
Conread position:
               
213-447
               

               
Cow position:
               
chr13:11147278-11147514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
215-383
               

               
Cow position:
               
chr13:6113329-6113154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
215-456
               

               
Cow position:
               
chr13:563168-562921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
216-461
               

               
Cow position:
               
chr13:20041994-20041739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr13:39948441-39948197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 127
               

               
Conread position:
               
216-463
               

               
Cow position:
               
chr13:37946230-37945991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
216-470
               

               
Cow position:
               
chr13:51108467-51108720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 160
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr13:1779805-1780088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 273
               

               
Conread position:
               
222-460
               

               
Cow position:
               
chr13:20536485-20536721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
222-475
               

               
Cow position:
               
chr13:17815760-17816007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
153, 18
               

               
Conread position:
               
222-484
               

               
Cow position:
               
chr13:20864034-20863776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
226-420
               

               
Cow position:
               
chr13:52858565-52858762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
226-494
               

               
Cow position:
               
chr13:33517932-33517669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
227-479
               

               
Cow position:
               
chr13:7257383-7257641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
228-355
               

               
Cow position:
               
chr13:55947761-55947890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
235-431
               

               
Cow position:
               
chr13:5079222-5079033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
245-479
               

               
Cow position:
               
chr13:15740074-15740306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
138, 16
               

               
Conread position:
               
246-490
               

               
Cow position:
               
chr13:37517127-37516885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
247-392
               

               
Cow position:
               
chr13:27517144-27517000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
247-409
               

               
Cow position:
               
chr13:7790027-7790184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
248-461
               

               
Cow position:
               
chr13:60690715-60690500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
135, 91
               

               
Conread position:
               
248-479
               

               
Cow position:
               
chr13:5091653-5091421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 7
               

               
Conread position:
               
250-489
               

               
Cow position:
               
chr13:21904677-21904909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
251-479
               

               
Cow position:
               
chr13:24776297-24776531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
163, 54
               

               
Conread position:
               
255-469
               

               
Cow position:
               
chr13:48944689-48944891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
255-479
               

               
Cow position:
               
chr13:25249136-25248904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
255-479
               

               
Cow position:
               
chr13:38012376-38012601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
257-479
               

               
Cow position:
               
chr13:24155562-24155780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
257-479
               

               
Cow position:
               
chr13:55295602-55295386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
132, 78
               

               
Conread position:
               
257-483
               

               
Cow position:
               
chr13:3003462-3003691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
257-483
               

               
Cow position:
               
chr13:19426675-19426454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
257-485
               

               
Cow position:
               
chr13:37980617-37980405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
259-475
               

               
Cow position:
               
chr13:34556314-34556096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
261-483
               

               
Cow position:
               
chr13:6606998-6606776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
263-475
               

               
Cow position:
               
chr13:52199113-52199325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
264-492
               

               
Cow position:
               
chr13:24539519-24539748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
265-479
               

               
Cow position:
               
chr13:17993958-17994166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
267-483
               

               
Cow position:
               
chr13:33900882-33900681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
268-485
               

               
Cow position:
               
chr13:54418261-54418478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
273-485
               

               
Cow position:
               
chr13:8635612-8635826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
112, 66
               

               
Conread position:
               
274-461
               

               
Cow position:
               
chr13:22025671-22025479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
140, 61
               

               
Conread position:
               
276-437
               

               
Cow position:
               
chr13:15947667-15947833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
286-460
               

               
Cow position:
               
chr13:37947953-37947790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
286-490
               

               
Cow position:
               
chr13:58719469-58719272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
298-479
               

               
Cow position:
               
chr13:13344019-13344194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
298-479
               

               
Cow position:
               
chr13:60436824-60436643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-485
               

               
Cow position:
               
chr13:48629067-48629236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               
Show alignments to all cow chromosomes.