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Cow genome map

           
Conread name:
           
Mus1-POSM0100014_A02F
        

               
Conread position:
               
3-479
               

               
Cow position:
               
chr17:30713607-30713139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
6-357
               

               
Cow position:
               
chr17:17193749-17193403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
46, 111
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr17:7802912-7803293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr17:20848784-20848322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
7-492
               

               
Cow position:
               
chr17:12289151-12289644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
8-239
               

               
Cow position:
               
chr17:27292196-27292430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
10-479
               

               
Cow position:
               
chr17:15684758-15684291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
11-479
               

               
Cow position:
               
chr17:18720194-18720662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
11-490
               

               
Cow position:
               
chr17:40772085-40771605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 86
               

               
Conread position:
               
12-336
               

               
Cow position:
               
chr17:11994767-11995105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
12-426
               

               
Cow position:
               
chr17:12946102-12946526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 84
               

               
Conread position:
               
12-433
               

               
Cow position:
               
chr17:30359711-30359310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
12-489
               

               
Cow position:
               
chr17:11215640-11216107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 79
               

               
Conread position:
               
13-220
               

               
Cow position:
               
chr17:6787192-6786982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr17:26225280-26225071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 78
               

               
Conread position:
               
13-308
               

               
Cow position:
               
chr17:21039808-21039518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
13-313
               

               
Cow position:
               
chr17:28982429-28982127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
13-347
               

               
Cow position:
               
chr17:1469630-1469293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 80
               

               
Conread position:
               
13-374
               

               
Cow position:
               
chr17:21489382-21489732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
241, 60
               

               
Conread position:
               
13-395
               

               
Cow position:
               
chr17:6318616-6318987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
13-426
               

               
Cow position:
               
chr17:27058298-27058714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
13-477
               

               
Cow position:
               
chr17:21738613-21739096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr17:6936426-6936878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr17:10528477-10528955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
13-479
               

               
Cow position:
               
chr17:20801066-20800602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
13-485
               

               
Cow position:
               
chr17:25815847-25815388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 96
               

               
Conread position:
               
13-489
               

               
Cow position:
               
chr17:36791376-36790924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
57, 80
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr17:11920916-11921119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
14-252
               

               
Cow position:
               
chr17:1463077-1463316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
14-252
               

               
Cow position:
               
chr17:17035197-17034963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
14-316
               

               
Cow position:
               
chr17:9770756-9770457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
14-457
               

               
Cow position:
               
chr17:11277776-11278224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
14-461
               

               
Cow position:
               
chr17:4213988-4213560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 42
               

               
Conread position:
               
14-478
               

               
Cow position:
               
chr17:17059669-17059227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
239, 39
               

               
Conread position:
               
14-479
               

               
Cow position:
               
chr17:9854232-9853772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
14-479
               

               
Cow position:
               
chr17:20157859-20157403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
14-485
               

               
Cow position:
               
chr17:36275587-36275137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 189
               

               
Conread position:
               
14-487
               

               
Cow position:
               
chr17:13922733-13922251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
14-489
               

               
Cow position:
               
chr17:14025661-14026139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
14-490
               

               
Cow position:
               
chr17:7810496-7810964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 233
               

               
Conread position:
               
14-490
               

               
Cow position:
               
chr17:31480779-31481267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 131
               

               
Conread position:
               
14-491
               

               
Cow position:
               
chr17:15664927-15664441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
14-492
               

               
Cow position:
               
chr17:24974194-24973723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 75
               

               
Conread position:
               
14-494
               

               
Cow position:
               
chr17:17410546-17410069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 24
               

               
Conread position:
               
15-294
               

               
Cow position:
               
chr17:35149282-35149560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
15-336
               

               
Cow position:
               
chr17:21806199-21806523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
15-400
               

               
Cow position:
               
chr17:40673623-40673252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
15-416
               

               
Cow position:
               
chr17:11962284-11962700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
15-479
               

               
Cow position:
               
chr17:21972878-21973345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
15-490
               

               
Cow position:
               
chr17:21292788-21293270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 129
               

               
Conread position:
               
15-491
               

               
Cow position:
               
chr17:14033390-14033875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
15-494
               

               
Cow position:
               
chr17:20092881-20093351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
16-251
               

               
Cow position:
               
chr17:20904858-20905084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
16-252
               

               
Cow position:
               
chr17:26072510-26072747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
16-321
               

               
Cow position:
               
chr17:5372283-5372588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
16-429
               

               
Cow position:
               
chr17:4105743-4106150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
16-457
               

               
Cow position:
               
chr17:17180293-17179844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
16-479
               

               
Cow position:
               
chr17:11381476-11381934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
16-479
               

               
Cow position:
               
chr17:11618836-11618366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
16-489
               

               
Cow position:
               
chr17:11831869-11832360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 40
               

               
Conread position:
               
16-492
               

               
Cow position:
               
chr17:32138168-32138627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
17-203
               

               
Cow position:
               
chr17:21236773-21236585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
17-285
               

               
Cow position:
               
chr17:25584492-25584216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 92
               

               
Conread position:
               
17-336
               

               
Cow position:
               
chr17:27730794-27730466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
17-391
               

               
Cow position:
               
chr17:20884773-20884397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 123
               

               
Conread position:
               
17-430
               

               
Cow position:
               
chr17:34650711-34650278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
17-457
               

               
Cow position:
               
chr17:1256250-1256696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 72
               

               
Conread position:
               
17-461
               

               
Cow position:
               
chr17:26000367-25999921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
17-472
               

               
Cow position:
               
chr17:1035346-1035811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr17:11839971-11839487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr17:17951478-17951029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
55, 121
               

               
Conread position:
               
17-489
               

               
Cow position:
               
chr17:21959435-21959903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 324
               

               
Conread position:
               
18-333
               

               
Cow position:
               
chr17:3153321-3153642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 153
               

               
Conread position:
               
18-341
               

               
Cow position:
               
chr17:29026323-29025989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
18-390
               

               
Cow position:
               
chr17:26233580-26233951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
18-455
               

               
Cow position:
               
chr17:24490788-24490331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
53, 104
               

               
Conread position:
               
18-478
               

               
Cow position:
               
chr17:23063969-23063498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
18-479
               

               
Cow position:
               
chr17:32027200-32027676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 233
               

               
Conread position:
               
18-479
               

               
Cow position:
               
chr17:38615209-38614742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 13
               

               
Conread position:
               
18-489
               

               
Cow position:
               
chr17:14049963-14050416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
18-494
               

               
Cow position:
               
chr17:16371504-16371023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
19-250
               

               
Cow position:
               
chr17:40355507-40355274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
19-329
               

               
Cow position:
               
chr17:40639193-40638883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
19-331
               

               
Cow position:
               
chr17:26448789-26448473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
19-474
               

               
Cow position:
               
chr17:25128108-25128558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
19-479
               

               
Cow position:
               
chr17:21363629-21363194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
19-481
               

               
Cow position:
               
chr17:40741900-40741430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
19-485
               

               
Cow position:
               
chr17:25189533-25189060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 178
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr17:22128167-22127852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
20-383
               

               
Cow position:
               
chr17:31856917-31856545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
20-421
               

               
Cow position:
               
chr17:9965782-9966189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
50, 18
               

               
Conread position:
               
20-448
               

               
Cow position:
               
chr17:20932569-20932145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
20-474
               

               
Cow position:
               
chr17:20992793-20993248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
20-479
               

               
Cow position:
               
chr17:5731163-5730710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
20-479
               

               
Cow position:
               
chr17:14004069-14003615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 47
               

               
Conread position:
               
21-363
               

               
Cow position:
               
chr17:25513874-25514221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
21-399
               

               
Cow position:
               
chr17:32280912-32280531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
21-444
               

               
Cow position:
               
chr17:8836707-8837128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 138
               

               
Conread position:
               
21-483
               

               
Cow position:
               
chr17:32278660-32279125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 91
               

               
Conread position:
               
21-489
               

               
Cow position:
               
chr17:34948881-34948416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
22-322
               

               
Cow position:
               
chr17:37815946-37816248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
8, 119
               

               
Conread position:
               
22-479
               

               
Cow position:
               
chr17:24883327-24883778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 88
               

               
Conread position:
               
23-308
               

               
Cow position:
               
chr17:5012083-5011803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
23-370
               

               
Cow position:
               
chr17:20335887-20335558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
23-400
               

               
Cow position:
               
chr17:31581712-31581350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 108
               

               
Conread position:
               
23-420
               

               
Cow position:
               
chr17:18146432-18146027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 73
               

               
Conread position:
               
23-457
               

               
Cow position:
               
chr17:21434486-21434921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
33, 61
               

               
Conread position:
               
23-485
               

               
Cow position:
               
chr17:13243812-13244246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
24-252
               

               
Cow position:
               
chr17:7571348-7571117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 73
               

               
Conread position:
               
24-366
               

               
Cow position:
               
chr17:14652543-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
228, 33
               

               
Conread position:
               
24-489
               

               
Cow position:
               
chr17:24587864-24587394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
25-426
               

               
Cow position:
               
chr17:7143097-7142703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
26-337
               

               
Cow position:
               
chr17:1466177-1466504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr17:5344856-5344660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
28-451
               

               
Cow position:
               
chr17:1063406-1063003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
29-426
               

               
Cow position:
               
chr17:25917122-25916731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 27
               

               
Conread position:
               
31-282
               

               
Cow position:
               
chr17:43957895-43957645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
31-479
               

               
Cow position:
               
chr17:26231199-26230726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 183
               

               
Conread position:
               
31-485
               

               
Cow position:
               
chr17:44146739-44147192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
31-491
               

               
Cow position:
               
chr17:27795889-27795420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
33-457
               

               
Cow position:
               
chr17:43717108-43717505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
33-494
               

               
Cow position:
               
chr17:7132192-7132684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 334
               

               
Conread position:
               
34-490
               

               
Cow position:
               
chr17:17222575-17222119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
58-474
               

               
Cow position:
               
chr17:10447117-10446707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
58-490
               

               
Cow position:
               
chr17:34078904-34079321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 48
               

               
Conread position:
               
61-479
               

               
Cow position:
               
chr17:25097654-25097249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
69-419
               

               
Cow position:
               
chr17:4786290-4786650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 277
               

               
Conread position:
               
69-479
               

               
Cow position:
               
chr17:4611868-4612291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
137, 33
               

               
Conread position:
               
70-479
               

               
Cow position:
               
chr17:1492955-1493370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
79-471
               

               
Cow position:
               
chr17:33053037-33052657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
110, 40
               

               
Conread position:
               
83-378
               

               
Cow position:
               
chr17:10561819-10561517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 259
               

               
Conread position:
               
87-461
               

               
Cow position:
               
chr17:17060504-17060878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
165, 54
               

               
Conread position:
               
87-476
               

               
Cow position:
               
chr17:5250401-5250767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
109, 41
               

               
Conread position:
               
87-476
               

               
Cow position:
               
chr17:40288824-40289214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 25
               

               
Conread position:
               
88-367
               

               
Cow position:
               
chr17:21325512-21325231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 190
               

               
Conread position:
               
88-453
               

               
Cow position:
               
chr17:32273509-32273874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 250
               

               
Conread position:
               
88-494
               

               
Cow position:
               
chr17:25796157-25796567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
89-379
               

               
Cow position:
               
chr17:36178868-36179135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
89-453
               

               
Cow position:
               
chr17:25612265-25611905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
163, 20
               

               
Conread position:
               
89-476
               

               
Cow position:
               
chr17:21755257-21755652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
89-480
               

               
Cow position:
               
chr17:20022336-20022732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 149
               

               
Conread position:
               
92-341
               

               
Cow position:
               
chr17:5349950-5350197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
160, 97
               

               
Conread position:
               
92-358
               

               
Cow position:
               
chr17:12880768-12880504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
159, 65
               

               
Conread position:
               
92-447
               

               
Cow position:
               
chr17:36203312-36203672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
92-474
               

               
Cow position:
               
chr17:2810806-2810412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 306
               

               
Conread position:
               
92-479
               

               
Cow position:
               
chr17:18108915-18109300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
150, 20
               

               
Conread position:
               
92-479
               

               
Cow position:
               
chr17:30665443-30665060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 41
               

               
Conread position:
               
92-492
               

               
Cow position:
               
chr17:9117816-9117416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 28
               

               
Conread position:
               
93-414
               

               
Cow position:
               
chr17:24559463-24559150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
246, 0
               

               
Conread position:
               
94-264
               

               
Cow position:
               
chr17:21788488-21788657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
94-353
               

               
Cow position:
               
chr17:25342569-25342828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
163, 240
               

               
Conread position:
               
94-378
               

               
Cow position:
               
chr17:11215061-11215342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
94-479
               

               
Cow position:
               
chr17:40331934-40331555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
94-480
               

               
Cow position:
               
chr17:8544475-8544095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 24
               

               
Conread position:
               
94-483
               

               
Cow position:
               
chr17:23101047-23101429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 146
               

               
Conread position:
               
94-485
               

               
Cow position:
               
chr17:22564356-22563967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 55
               

               
Conread position:
               
95-291
               

               
Cow position:
               
chr17:27303798-27303987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
157, 106
               

               
Conread position:
               
95-327
               

               
Cow position:
               
chr17:26789590-26789361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
159, 113
               

               
Conread position:
               
95-356
               

               
Cow position:
               
chr17:23516772-23517033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
95-384
               

               
Cow position:
               
chr17:25594520-25594822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
148, 259
               

               
Conread position:
               
95-423
               

               
Cow position:
               
chr17:6329286-6328951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 249
               

               
Conread position:
               
95-456
               

               
Cow position:
               
chr17:24773850-24773492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
101, 178
               

               
Conread position:
               
95-479
               

               
Cow position:
               
chr17:24077572-24077190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 90
               

               
Conread position:
               
95-485
               

               
Cow position:
               
chr17:30529376-30529756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
96-490
               

               
Cow position:
               
chr17:20126767-20126396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
98-479
               

               
Cow position:
               
chr17:32471615-32472005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
98-485
               

               
Cow position:
               
chr17:8079480-8079097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 164
               

               
Conread position:
               
102-241
               

               
Cow position:
               
chr17:37430341-37430480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
102-337
               

               
Cow position:
               
chr17:23883105-23883331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
102-444
               

               
Cow position:
               
chr17:5900533-5900199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
145, 192
               

               
Conread position:
               
102-479
               

               
Cow position:
               
chr17:5768068-5767700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
160, 63
               

               
Conread position:
               
102-480
               

               
Cow position:
               
chr17:36330795-36331181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 31
               

               
Conread position:
               
104-457
               

               
Cow position:
               
chr17:37479840-37480185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 97
               

               
Conread position:
               
106-371
               

               
Cow position:
               
chr17:21757981-21758252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
107-380
               

               
Cow position:
               
chr17:25502269-25501995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
107-460
               

               
Cow position:
               
chr17:9911916-9911568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 87
               

               
Conread position:
               
107-462
               

               
Cow position:
               
chr17:34596097-34595742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 35
               

               
Conread position:
               
109-338
               

               
Cow position:
               
chr17:15376747-15376531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
148, 24
               

               
Conread position:
               
109-460
               

               
Cow position:
               
chr17:5514912-5514564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
110-246
               

               
Cow position:
               
chr17:5720027-5719891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-252
               

               
Cow position:
               
chr17:24862614-24862472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
110-305
               

               
Cow position:
               
chr17:950128-949932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
110-341
               

               
Cow position:
               
chr17:22056872-22057101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
148, 169
               

               
Conread position:
               
110-355
               

               
Cow position:
               
chr17:21922478-21922712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
140, 177
               

               
Conread position:
               
110-356
               

               
Cow position:
               
chr17:27202891-27203135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 14
               

               
Conread position:
               
110-367
               

               
Cow position:
               
chr17:38990262-38990001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
110-381
               

               
Cow position:
               
chr17:37699194-37699472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
110-391
               

               
Cow position:
               
chr17:32349223-32348948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
146, 82
               

               
Conread position:
               
110-391
               

               
Cow position:
               
chr17:39857541-39857267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
138, 35
               

               
Conread position:
               
110-426
               

               
Cow position:
               
chr17:1562631-1562935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
189, 81
               

               
Conread position:
               
110-437
               

               
Cow position:
               
chr17:1634336-1634654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 180
               

               
Conread position:
               
110-461
               

               
Cow position:
               
chr17:33275594-33275942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 81
               

               
Conread position:
               
110-472
               

               
Cow position:
               
chr17:27429721-27429371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 81
               

               
Conread position:
               
110-478
               

               
Cow position:
               
chr17:41030093-41029739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 20
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr17:21495527-21495163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr17:27048311-27047949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 69
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr17:29472622-29472261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 86
               

               
Conread position:
               
110-485
               

               
Cow position:
               
chr17:21680935-21680548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 226
               

               
Conread position:
               
110-485
               

               
Cow position:
               
chr17:33288501-33288874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 185
               

               
Conread position:
               
110-489
               

               
Cow position:
               
chr17:8690296-8690664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
110-489
               

               
Cow position:
               
chr17:12219783-12220162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 104
               

               
Conread position:
               
110-489
               

               
Cow position:
               
chr17:32553899-32554247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 42
               

               
Conread position:
               
110-489
               

               
Cow position:
               
chr17:43141553-43141944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
110-491
               

               
Cow position:
               
chr17:38833199-38832814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 90
               

               
Conread position:
               
110-493
               

               
Cow position:
               
chr17:20234367-20233999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 105
               

               
Conread position:
               
110-494
               

               
Cow position:
               
chr17:32418960-32419346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 176
               

               
Conread position:
               
111-471
               

               
Cow position:
               
chr17:5898372-5898730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
75, 189
               

               
Conread position:
               
111-474
               

               
Cow position:
               
chr17:25032327-25032681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
85, 93
               

               
Conread position:
               
112-337
               

               
Cow position:
               
chr17:21744085-21743863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
112-342
               

               
Cow position:
               
chr17:16616967-16616740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
112-356
               

               
Cow position:
               
chr17:2275624-2275383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
166, 142
               

               
Conread position:
               
112-364
               

               
Cow position:
               
chr17:3354036-3353782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
112-392
               

               
Cow position:
               
chr17:6848948-6848678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
245, 79
               

               
Conread position:
               
112-440
               

               
Cow position:
               
chr17:12591328-12590988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 234
               

               
Conread position:
               
112-440
               

               
Cow position:
               
chr17:38362843-38363146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
112-457
               

               
Cow position:
               
chr17:22806389-22806733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 103
               

               
Conread position:
               
112-461
               

               
Cow position:
               
chr17:6566630-6566275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
112-477
               

               
Cow position:
               
chr17:11156340-11156705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 74
               

               
Conread position:
               
112-479
               

               
Cow position:
               
chr17:20780670-20780298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 241
               

               
Conread position:
               
112-479
               

               
Cow position:
               
chr17:29292228-29292583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 53
               

               
Conread position:
               
112-492
               

               
Cow position:
               
chr17:30718264-30718646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 166
               

               
Conread position:
               
112-493
               

               
Cow position:
               
chr17:19891778-19891387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 189
               

               
Conread position:
               
112-494
               

               
Cow position:
               
chr17:9746666-9746292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 83
               

               
Conread position:
               
113-334
               

               
Cow position:
               
chr17:10431821-10432048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
113-411
               

               
Cow position:
               
chr17:20874549-20874249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
126, 277
               

               
Conread position:
               
113-440
               

               
Cow position:
               
chr17:10458779-10459111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 235
               

               
Conread position:
               
113-455
               

               
Cow position:
               
chr17:12536312-12536658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 230
               

               
Conread position:
               
113-460
               

               
Cow position:
               
chr17:40312858-40312526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
113-479
               

               
Cow position:
               
chr17:24580142-24580513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
113-491
               

               
Cow position:
               
chr17:21335539-21335926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 228
               

               
Conread position:
               
114-311
               

               
Cow position:
               
chr17:25126503-25126303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
114-316
               

               
Cow position:
               
chr17:16158643-16158437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
114-340
               

               
Cow position:
               
chr17:39715307-39715081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 44
               

               
Conread position:
               
114-369
               

               
Cow position:
               
chr17:34751254-34751509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
114-395
               

               
Cow position:
               
chr17:1114040-1113755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
114-430
               

               
Cow position:
               
chr17:979015-979318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 82
               

               
Conread position:
               
114-494
               

               
Cow position:
               
chr17:6423915-6423532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
115-316
               

               
Cow position:
               
chr17:7590312-7590511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 147
               

               
Conread position:
               
118-494
               

               
Cow position:
               
chr17:35387853-35388239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
134, 128
               

               
Conread position:
               
121-333
               

               
Cow position:
               
chr17:36864775-36864560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 63
               

               
Conread position:
               
121-382
               

               
Cow position:
               
chr17:1040889-1040629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
126, 15
               

               
Conread position:
               
121-385
               

               
Cow position:
               
chr17:33657924-33658190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 28
               

               
Conread position:
               
121-478
               

               
Cow position:
               
chr17:40421815-40421456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
121-480
               

               
Cow position:
               
chr17:11296798-11296420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
35, 234
               

               
Conread position:
               
121-483
               

               
Cow position:
               
chr17:11172471-11172833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
121-483
               

               
Cow position:
               
chr17:27142890-27142538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
73, 87
               

               
Conread position:
               
122-480
               

               
Cow position:
               
chr17:24554140-24553789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 121
               

               
Conread position:
               
122-483
               

               
Cow position:
               
chr17:22032551-22032901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 134
               

               
Conread position:
               
122-491
               

               
Cow position:
               
chr17:30539126-30539477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 32
               

               
Conread position:
               
124-479
               

               
Cow position:
               
chr17:5224542-5224189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
124-494
               

               
Cow position:
               
chr17:3503723-3503351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
123, 87
               

               
Conread position:
               
125-479
               

               
Cow position:
               
chr17:33933602-33933951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 219
               

               
Conread position:
               
127-479
               

               
Cow position:
               
chr17:1410099-1410455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 213
               

               
Conread position:
               
129-380
               

               
Cow position:
               
chr17:23563658-23563904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
136-479
               

               
Cow position:
               
chr17:20081669-20081993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
137-313
               

               
Cow position:
               
chr17:22246118-22245941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
137-374
               

               
Cow position:
               
chr17:7137108-7136873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 110
               

               
Conread position:
               
137-492
               

               
Cow position:
               
chr17:924007-923653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 6
               

               
Conread position:
               
138-379
               

               
Cow position:
               
chr17:23798409-23798168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 207
               

               
Conread position:
               
138-461
               

               
Cow position:
               
chr17:41891933-41892264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
96, 203
               

               
Conread position:
               
140-391
               

               
Cow position:
               
chr17:552844-553083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
140-398
               

               
Cow position:
               
chr17:14060647-14060909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 76
               

               
Conread position:
               
140-436
               

               
Cow position:
               
chr17:5398315-5398606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
143-346
               

               
Cow position:
               
chr17:8597987-8598189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
143-366
               

               
Cow position:
               
chr17:22135831-22135610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
95, 104
               

               
Conread position:
               
143-383
               

               
Cow position:
               
chr17:26102019-26102249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
143-390
               

               
Cow position:
               
chr17:33410886-33411147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
143-406
               

               
Cow position:
               
chr17:24928598-24928338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
96, 108
               

               
Conread position:
               
143-414
               

               
Cow position:
               
chr17:31701554-31701288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
193, 97
               

               
Conread position:
               
143-440
               

               
Cow position:
               
chr17:24149307-24149002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
143-478
               

               
Cow position:
               
chr17:11101684-11102007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 36
               

               
Conread position:
               
143-485
               

               
Cow position:
               
chr17:11036035-11035701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 103
               

               
Conread position:
               
143-490
               

               
Cow position:
               
chr17:37163408-37163752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 113
               

               
Conread position:
               
146-470
               

               
Cow position:
               
chr17:21628598-21628277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 67
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr17:38647179-38646873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
102, 154
               

               
Conread position:
               
149-477
               

               
Cow position:
               
chr17:28540145-28539824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 46
               

               
Conread position:
               
162-433
               

               
Cow position:
               
chr17:21917769-21918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
162-479
               

               
Cow position:
               
chr17:18490644-18490319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
78, 256
               

               
Conread position:
               
165-381
               

               
Cow position:
               
chr17:7654351-7654568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
92, 182
               

               
Conread position:
               
165-479
               

               
Cow position:
               
chr17:18860620-18860933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
170-493
               

               
Cow position:
               
chr17:33271587-33271907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr17:27549735-27549987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
173-460
               

               
Cow position:
               
chr17:7648305-7648025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 67
               

               
Conread position:
               
173-485
               

               
Cow position:
               
chr17:5688268-5688568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
173-490
               

               
Cow position:
               
chr17:2034622-2034320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
178-479
               

               
Cow position:
               
chr17:5733379-5733662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
178-485
               

               
Cow position:
               
chr17:27679145-27679464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
182-471
               

               
Cow position:
               
chr17:6624337-6624052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
183-493
               

               
Cow position:
               
chr17:20870015-20870321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
60, 162
               

               
Conread position:
               
184-494
               

               
Cow position:
               
chr17:15333628-15333939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
71, 157
               

               
Conread position:
               
187-490
               

               
Cow position:
               
chr17:20839487-20839783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
188-479
               

               
Cow position:
               
chr17:41289944-41290231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 111
               

               
Conread position:
               
189-369
               

               
Cow position:
               
chr17:17266814-17266998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 156
               

               
Conread position:
               
192-463
               

               
Cow position:
               
chr17:5246968-5246697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
198-479
               

               
Cow position:
               
chr17:21323344-21323086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
65, 92
               

               
Conread position:
               
200-414
               

               
Cow position:
               
chr17:267519-267733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
200-426
               

               
Cow position:
               
chr17:1353463-1353235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
200-476
               

               
Cow position:
               
chr17:3471485-3471210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 141
               

               
Conread position:
               
200-479
               

               
Cow position:
               
chr17:23246274-23245998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
200-479
               

               
Cow position:
               
chr17:24550243-24549958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 270
               

               
Conread position:
               
200-479
               

               
Cow position:
               
chr17:26183294-26183008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
54, 180
               

               
Conread position:
               
200-479
               

               
Cow position:
               
chr17:27306226-27305947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 143
               

               
Conread position:
               
200-489
               

               
Cow position:
               
chr17:24761162-24761447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
200-496
               

               
Cow position:
               
chr17:15067565-15067852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
201-445
               

               
Cow position:
               
chr17:34207750-34208000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
201-457
               

               
Cow position:
               
chr17:44232647-44232912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 140
               

               
Conread position:
               
202-489
               

               
Cow position:
               
chr17:9778307-9778027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
203-494
               

               
Cow position:
               
chr17:9079141-9079415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
204-489
               

               
Cow position:
               
chr17:21312746-21313025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 141
               

               
Conread position:
               
208-373
               

               
Cow position:
               
chr17:1311408-1311240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
208-461
               

               
Cow position:
               
chr17:26881273-26881533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 137
               

               
Conread position:
               
208-463
               

               
Cow position:
               
chr17:12059034-12059289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 129
               

               
Conread position:
               
208-478
               

               
Cow position:
               
chr17:13143630-13143903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
211-475
               

               
Cow position:
               
chr17:27765328-27765071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 131
               

               
Conread position:
               
212-398
               

               
Cow position:
               
chr17:11921220-11921415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
212-417
               

               
Cow position:
               
chr17:5381940-5382138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
212-457
               

               
Cow position:
               
chr17:21697788-21697540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
5, 46
               

               
Conread position:
               
213-461
               

               
Cow position:
               
chr17:32950328-32950076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
214-460
               

               
Cow position:
               
chr17:35311479-35311226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
216-366
               

               
Cow position:
               
chr17:20306100-20305947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
216-386
               

               
Cow position:
               
chr17:30734244-30734413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
216-485
               

               
Cow position:
               
chr17:242688-242416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
216-485
               

               
Cow position:
               
chr17:1295521-1295791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 119
               

               
Conread position:
               
220-485
               

               
Cow position:
               
chr17:3387319-3387074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
220-493
               

               
Cow position:
               
chr17:5255327-5255606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
220-494
               

               
Cow position:
               
chr17:11056323-11056604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
222-489
               

               
Cow position:
               
chr17:21031831-21031564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
225-466
               

               
Cow position:
               
chr17:4824530-4824293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
162, 28
               

               
Conread position:
               
225-475
               

               
Cow position:
               
chr17:966705-966949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
226-479
               

               
Cow position:
               
chr17:4721534-4721273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
226-485
               

               
Cow position:
               
chr17:21211993-21212257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 116
               

               
Conread position:
               
235-423
               

               
Cow position:
               
chr17:40792251-40792065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
246-475
               

               
Cow position:
               
chr17:22781706-22781482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
139, 8
               

               
Conread position:
               
247-479
               

               
Cow position:
               
chr17:42347210-42347435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
247-489
               

               
Cow position:
               
chr17:5745238-5745467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
247-492
               

               
Cow position:
               
chr17:21874291-21874543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 165
               

               
Conread position:
               
249-489
               

               
Cow position:
               
chr17:32651634-32651392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
255-463
               

               
Cow position:
               
chr17:4606963-4606771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
201, 6
               

               
Conread position:
               
255-478
               

               
Cow position:
               
chr17:18884328-18884560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 218
               

               
Conread position:
               
255-491
               

               
Cow position:
               
chr17:3843487-3843261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
116, 70
               

               
Conread position:
               
255-491
               

               
Cow position:
               
chr17:23337010-23337242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
206, 6
               

               
Conread position:
               
256-424
               

               
Cow position:
               
chr17:38613253-38613087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
256-489
               

               
Cow position:
               
chr17:31231924-31232154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
257-475
               

               
Cow position:
               
chr17:19455306-19455513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
257-477
               

               
Cow position:
               
chr17:21017802-21017582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
128, 72
               

               
Conread position:
               
257-479
               

               
Cow position:
               
chr17:3306872-3306654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
258-461
               

               
Cow position:
               
chr17:4436229-4436427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
265-479
               

               
Cow position:
               
chr17:13409360-13409568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
268-457
               

               
Cow position:
               
chr17:37857729-37857926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
272-457
               

               
Cow position:
               
chr17:21412254-21412439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
273-457
               

               
Cow position:
               
chr17:3518263-3518444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
274-479
               

               
Cow position:
               
chr17:20835585-20835379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
274-479
               

               
Cow position:
               
chr17:25168307-25168099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 65
               

               
Conread position:
               
276-423
               

               
Cow position:
               
chr17:20928901-20928752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
277-494
               

               
Cow position:
               
chr17:26627653-26627870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
110, 62
               

               
Conread position:
               
279-483
               

               
Cow position:
               
chr17:3498680-3498882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
287-477
               

               
Cow position:
               
chr17:21710481-21710293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
105, 46
               

               
Conread position:
               
289-483
               

               
Cow position:
               
chr17:43527951-43527763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
292-479
               

               
Cow position:
               
chr17:16117452-16117643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
298-479
               

               
Cow position:
               
chr17:3258460-3258283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               
Show alignments to all cow chromosomes.