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Cow genome map

           
Conread name:
           
Mus1-POSM0100014_A02F
        

               
Conread position:
               
1-384
               

               
Cow position:
               
chr25:9002889-9002513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
10-479
               

               
Cow position:
               
chr25:16921581-16922049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 103
               

               
Conread position:
               
12-388
               

               
Cow position:
               
chr25:447951-448333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
44, 171
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr25:33555812-33555536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr25:432839-433124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 97
               

               
Conread position:
               
13-414
               

               
Cow position:
               
chr25:12755282-12755683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
14-231
               

               
Cow position:
               
chr25:5808156-5807937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
14-331
               

               
Cow position:
               
chr25:1823883-1824207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
42, 191
               

               
Conread position:
               
14-375
               

               
Cow position:
               
chr25:30619277-30618913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 183
               

               
Conread position:
               
14-407
               

               
Cow position:
               
chr25:37562909-37562522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
14-424
               

               
Cow position:
               
chr25:17914992-17914578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 121
               

               
Conread position:
               
14-485
               

               
Cow position:
               
chr25:2111244-2110820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
14-492
               

               
Cow position:
               
chr25:11957012-11956557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
38, 59
               

               
Conread position:
               
15-306
               

               
Cow position:
               
chr25:12305486-12305189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
15-350
               

               
Cow position:
               
chr25:20157086-20157428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
15-426
               

               
Cow position:
               
chr25:13295070-13294702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
41, 70
               

               
Conread position:
               
15-490
               

               
Cow position:
               
chr25:33457932-33457440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
16-251
               

               
Cow position:
               
chr25:17919183-17918946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
16-478
               

               
Cow position:
               
chr25:26087724-26087259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
17-236
               

               
Cow position:
               
chr25:36872850-36873069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
17-252
               

               
Cow position:
               
chr25:33311118-33311356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
17-349
               

               
Cow position:
               
chr25:17474308-17474645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr25:5921151-5920773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
17-414
               

               
Cow position:
               
chr25:26134251-26133846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
17-461
               

               
Cow position:
               
chr25:20008339-20007908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
17-474
               

               
Cow position:
               
chr25:24669247-24669682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
17-476
               

               
Cow position:
               
chr25:33663704-33664150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr25:6463823-6464286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
17-479
               

               
Cow position:
               
chr25:6473871-6474355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 337
               

               
Conread position:
               
17-491
               

               
Cow position:
               
chr25:6803753-6803293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
17-492
               

               
Cow position:
               
chr25:1838448-1837970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
17-492
               

               
Cow position:
               
chr25:18294111-18294584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
17-500
               

               
Cow position:
               
chr25:12260681-12261175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
18-305
               

               
Cow position:
               
chr25:12807243-12806958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
18-336
               

               
Cow position:
               
chr25:7817189-7816867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
18-343
               

               
Cow position:
               
chr25:7035764-7035431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
18-355
               

               
Cow position:
               
chr25:18201725-18202059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
52, 75
               

               
Conread position:
               
18-439
               

               
Cow position:
               
chr25:7008127-7007699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
18-453
               

               
Cow position:
               
chr25:10656834-10657255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
20-364
               

               
Cow position:
               
chr25:22731027-22730691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
20-476
               

               
Cow position:
               
chr25:11585731-11585264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 323
               

               
Conread position:
               
21-333
               

               
Cow position:
               
chr25:9843382-9843062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 272
               

               
Conread position:
               
21-372
               

               
Cow position:
               
chr25:21668449-21668096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 88
               

               
Conread position:
               
21-381
               

               
Cow position:
               
chr25:7380637-7380999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
21-425
               

               
Cow position:
               
chr25:13272770-13272366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
22-249
               

               
Cow position:
               
chr25:9616038-9615811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
22-380
               

               
Cow position:
               
chr25:31732133-31732492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
186, 31
               

               
Conread position:
               
23-471
               

               
Cow position:
               
chr25:10504136-10504585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
23-477
               

               
Cow position:
               
chr25:5846606-5847061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
23-479
               

               
Cow position:
               
chr25:14791953-14791495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
24-479
               

               
Cow position:
               
chr25:7306488-7306041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
27-306
               

               
Cow position:
               
chr25:7799747-7799466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
27-479
               

               
Cow position:
               
chr25:7581227-7581684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 182
               

               
Conread position:
               
31-303
               

               
Cow position:
               
chr25:35052427-35052705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
31-388
               

               
Cow position:
               
chr25:26679418-26679062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 80
               

               
Conread position:
               
31-490
               

               
Cow position:
               
chr25:20785396-20785849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
35-485
               

               
Cow position:
               
chr25:16867428-16866969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 11
               

               
Conread position:
               
37-479
               

               
Cow position:
               
chr25:20402524-20402976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
47-313
               

               
Cow position:
               
chr25:36120676-36120408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
16, 204
               

               
Conread position:
               
48-479
               

               
Cow position:
               
chr25:17566762-17566330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
51-483
               

               
Cow position:
               
chr25:20349040-20348597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
52-405
               

               
Cow position:
               
chr25:13443240-13443586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
52-479
               

               
Cow position:
               
chr25:22203530-22203947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
58-421
               

               
Cow position:
               
chr25:17342622-17342250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 35
               

               
Conread position:
               
58-478
               

               
Cow position:
               
chr25:18075827-18075413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
13, 23
               

               
Conread position:
               
61-478
               

               
Cow position:
               
chr25:788415-788013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
61-483
               

               
Cow position:
               
chr25:36535259-36535693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
69-341
               

               
Cow position:
               
chr25:36872512-36872240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
69-478
               

               
Cow position:
               
chr25:12097986-12097586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 40
               

               
Conread position:
               
81-395
               

               
Cow position:
               
chr25:27532531-27532846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
87-401
               

               
Cow position:
               
chr25:15440646-15440958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
87-457
               

               
Cow position:
               
chr25:61786-61422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 167
               

               
Conread position:
               
88-342
               

               
Cow position:
               
chr25:34241968-34242218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
23, 168
               

               
Conread position:
               
88-485
               

               
Cow position:
               
chr25:21245473-21245869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 24
               

               
Conread position:
               
89-341
               

               
Cow position:
               
chr25:19363925-19364183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
89-398
               

               
Cow position:
               
chr25:23244869-23245185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
89-438
               

               
Cow position:
               
chr25:2624929-2624588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
296, 93
               

               
Conread position:
               
89-479
               

               
Cow position:
               
chr25:9269475-9269116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
173, 20
               

               
Conread position:
               
89-492
               

               
Cow position:
               
chr25:20069856-20069454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
91-493
               

               
Cow position:
               
chr25:7216956-7216557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 95
               

               
Conread position:
               
92-252
               

               
Cow position:
               
chr25:7726793-7726633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
92-306
               

               
Cow position:
               
chr25:26052034-26051814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
104, 111
               

               
Conread position:
               
92-426
               

               
Cow position:
               
chr25:8157381-8157714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
163, 18
               

               
Conread position:
               
92-479
               

               
Cow position:
               
chr25:3145974-3145589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 47
               

               
Conread position:
               
93-347
               

               
Cow position:
               
chr25:17119871-17119616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
132, 8
               

               
Conread position:
               
93-479
               

               
Cow position:
               
chr25:38982223-38981856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
94-278
               

               
Cow position:
               
chr25:35109140-35109324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
94-305
               

               
Cow position:
               
chr25:20447700-20447485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 162
               

               
Conread position:
               
94-379
               

               
Cow position:
               
chr25:5474103-5474383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
94-395
               

               
Cow position:
               
chr25:22750877-22751181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 250
               

               
Conread position:
               
94-479
               

               
Cow position:
               
chr25:9989982-9990347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
94-479
               

               
Cow position:
               
chr25:17658740-17658358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 106
               

               
Conread position:
               
94-479
               

               
Cow position:
               
chr25:23829000-23829374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
94-490
               

               
Cow position:
               
chr25:28187816-28188216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 250
               

               
Conread position:
               
95-252
               

               
Cow position:
               
chr25:4009221-4009064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
101, 105
               

               
Conread position:
               
95-333
               

               
Cow position:
               
chr25:30817015-30816772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 13
               

               
Conread position:
               
95-424
               

               
Cow position:
               
chr25:7750580-7750248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
155, 218
               

               
Conread position:
               
95-457
               

               
Cow position:
               
chr25:13380473-13380851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
95-489
               

               
Cow position:
               
chr25:33978096-33978468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 17
               

               
Conread position:
               
95-491
               

               
Cow position:
               
chr25:41363020-41363415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
96-411
               

               
Cow position:
               
chr25:18906012-18905692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 246
               

               
Conread position:
               
98-461
               

               
Cow position:
               
chr25:1763212-1762869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
154, 110
               

               
Conread position:
               
100-374
               

               
Cow position:
               
chr25:8961893-8961622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
150, 102
               

               
Conread position:
               
102-331
               

               
Cow position:
               
chr25:36555568-36555801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
102-387
               

               
Cow position:
               
chr25:24651335-24651617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
156, 60
               

               
Conread position:
               
102-479
               

               
Cow position:
               
chr25:11661697-11662076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
102-480
               

               
Cow position:
               
chr25:14513236-14512858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 245
               

               
Conread position:
               
110-281
               

               
Cow position:
               
chr25:30656536-30656702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
110-330
               

               
Cow position:
               
chr25:12252696-12252923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
142, 90
               

               
Conread position:
               
110-356
               

               
Cow position:
               
chr25:14157739-14157488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 225
               

               
Conread position:
               
110-358
               

               
Cow position:
               
chr25:24202899-24203128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
172, 80
               

               
Conread position:
               
110-366
               

               
Cow position:
               
chr25:22242076-22241835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
110-368
               

               
Cow position:
               
chr25:38421779-38421534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 136
               

               
Conread position:
               
110-391
               

               
Cow position:
               
chr25:21893451-21893168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
140, 235
               

               
Conread position:
               
110-414
               

               
Cow position:
               
chr25:13672516-13672196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 242
               

               
Conread position:
               
110-426
               

               
Cow position:
               
chr25:17144550-17144228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
110-426
               

               
Cow position:
               
chr25:20133202-20133520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
138, 28
               

               
Conread position:
               
110-457
               

               
Cow position:
               
chr25:12840605-12840953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 272
               

               
Conread position:
               
110-475
               

               
Cow position:
               
chr25:27531158-27531520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
105, 138
               

               
Conread position:
               
110-477
               

               
Cow position:
               
chr25:36081988-36081619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 105
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr25:13569063-13569424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr25:26224916-26225296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 294
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr25:26655020-26654650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr25:26701140-26700783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
110-479
               

               
Cow position:
               
chr25:33256467-33256112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 92
               

               
Conread position:
               
110-489
               

               
Cow position:
               
chr25:36762218-36761839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 189
               

               
Conread position:
               
110-490
               

               
Cow position:
               
chr25:21267100-21266738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 47
               

               
Conread position:
               
110-491
               

               
Cow position:
               
chr25:13325693-13325331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
110-493
               

               
Cow position:
               
chr25:14196974-14196584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
111-316
               

               
Cow position:
               
chr25:6928396-6928605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
117, 103
               

               
Conread position:
               
111-436
               

               
Cow position:
               
chr25:34768622-34768934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
111-448
               

               
Cow position:
               
chr25:10217937-10218277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
111-479
               

               
Cow position:
               
chr25:21894773-21895140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 65
               

               
Conread position:
               
111-490
               

               
Cow position:
               
chr25:20023274-20023665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
131, 226
               

               
Conread position:
               
112-250
               

               
Cow position:
               
chr25:13503545-13503406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
112-382
               

               
Cow position:
               
chr25:34378994-34379264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 201
               

               
Conread position:
               
112-394
               

               
Cow position:
               
chr25:23779220-23779495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
112, 9
               

               
Conread position:
               
112-462
               

               
Cow position:
               
chr25:18266275-18265923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
91, 84
               

               
Conread position:
               
112-463
               

               
Cow position:
               
chr25:25861240-25861600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
112-489
               

               
Cow position:
               
chr25:20076608-20076227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 218
               

               
Conread position:
               
113-457
               

               
Cow position:
               
chr25:18988493-18988141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
113-464
               

               
Cow position:
               
chr25:8576804-8576451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
133, 160
               

               
Conread position:
               
115-475
               

               
Cow position:
               
chr25:14466986-14467335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
115-478
               

               
Cow position:
               
chr25:35345118-35344782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 78
               

               
Conread position:
               
118-475
               

               
Cow position:
               
chr25:16400180-16400503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
121-277
               

               
Cow position:
               
chr25:18541844-18542007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
121-306
               

               
Cow position:
               
chr25:23817738-23817935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
121-464
               

               
Cow position:
               
chr25:2136452-2136110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
59, 63
               

               
Conread position:
               
121-479
               

               
Cow position:
               
chr25:4547616-4547977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
121, 163
               

               
Conread position:
               
121-485
               

               
Cow position:
               
chr25:6227137-6226778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
128, 165
               

               
Conread position:
               
121-485
               

               
Cow position:
               
chr25:16064994-16064634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 80
               

               
Conread position:
               
122-479
               

               
Cow position:
               
chr25:11436706-11437059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 201
               

               
Conread position:
               
123-355
               

               
Cow position:
               
chr25:20216932-20216700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
120, 13
               

               
Conread position:
               
123-477
               

               
Cow position:
               
chr25:17975278-17975622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
124-490
               

               
Cow position:
               
chr25:14833562-14833919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
125-311
               

               
Cow position:
               
chr25:5920179-5919992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
126-493
               

               
Cow position:
               
chr25:9349187-9349528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
82, 32
               

               
Conread position:
               
130-479
               

               
Cow position:
               
chr25:5407835-5407493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
122, 187
               

               
Conread position:
               
131-493
               

               
Cow position:
               
chr25:22296934-22297290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
132-490
               

               
Cow position:
               
chr25:35612222-35612569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
124, 106
               

               
Conread position:
               
135-489
               

               
Cow position:
               
chr25:37594494-37594147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 167
               

               
Conread position:
               
136-460
               

               
Cow position:
               
chr25:15377413-15377095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 51
               

               
Conread position:
               
138-426
               

               
Cow position:
               
chr25:16714184-16714478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
138-489
               

               
Cow position:
               
chr25:11131669-11131318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
96, 144
               

               
Conread position:
               
138-489
               

               
Cow position:
               
chr25:38135835-38135480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 210
               

               
Conread position:
               
139-461
               

               
Cow position:
               
chr25:38425441-38425127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
142-403
               

               
Cow position:
               
chr25:19317346-19317079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 43
               

               
Conread position:
               
143-355
               

               
Cow position:
               
chr25:15634389-15634609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 103
               

               
Conread position:
               
143-385
               

               
Cow position:
               
chr25:6996864-6996619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
143-388
               

               
Cow position:
               
chr25:35180994-35180760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 103
               

               
Conread position:
               
143-406
               

               
Cow position:
               
chr25:17991507-17991768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 103
               

               
Conread position:
               
143-457
               

               
Cow position:
               
chr25:33959172-33959495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
76, 104
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr25:6885891-6886234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
143-488
               

               
Cow position:
               
chr25:11139718-11139384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
242, 111
               

               
Conread position:
               
147-471
               

               
Cow position:
               
chr25:12293671-12294000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
93, 99
               

               
Conread position:
               
147-478
               

               
Cow position:
               
chr25:18487744-18487418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 98
               

               
Conread position:
               
148-423
               

               
Cow position:
               
chr25:27801353-27801089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
251, 44
               

               
Conread position:
               
151-478
               

               
Cow position:
               
chr25:2046488-2046810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 49
               

               
Conread position:
               
162-378
               

               
Cow position:
               
chr25:11066082-11066304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
165-479
               

               
Cow position:
               
chr25:35347961-35347648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
165-489
               

               
Cow position:
               
chr25:12081264-12081582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 43
               

               
Conread position:
               
166-457
               

               
Cow position:
               
chr25:21289403-21289105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
166-476
               

               
Cow position:
               
chr25:2194988-2194693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 30
               

               
Conread position:
               
169-417
               

               
Cow position:
               
chr25:8596687-8596458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
239, 31
               

               
Conread position:
               
173-452
               

               
Cow position:
               
chr25:9754046-9754314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
176-340
               

               
Cow position:
               
chr25:24504453-24504618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
176-383
               

               
Cow position:
               
chr25:8485444-8485656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
176-460
               

               
Cow position:
               
chr25:1735274-1735554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
179-468
               

               
Cow position:
               
chr25:11666692-11666410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
182-448
               

               
Cow position:
               
chr25:12239106-12239374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
182-489
               

               
Cow position:
               
chr25:9956997-9957299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
184-365
               

               
Cow position:
               
chr25:12997632-12997449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
68, 14
               

               
Conread position:
               
185-395
               

               
Cow position:
               
chr25:16555804-16555589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
185-475
               

               
Cow position:
               
chr25:8560907-8560616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
187-407
               

               
Cow position:
               
chr25:18894683-18894908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 156
               

               
Conread position:
               
190-494
               

               
Cow position:
               
chr25:25827508-25827193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 283
               

               
Conread position:
               
196-477
               

               
Cow position:
               
chr25:448321-448600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
200-430
               

               
Cow position:
               
chr25:26269914-26270142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
200-448
               

               
Cow position:
               
chr25:35333179-35332939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
53, 14
               

               
Conread position:
               
200-457
               

               
Cow position:
               
chr25:36779524-36779260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
55, 146
               

               
Conread position:
               
200-501
               

               
Cow position:
               
chr25:6891512-6891796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
126, 45
               

               
Conread position:
               
201-398
               

               
Cow position:
               
chr25:31705025-31704817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
201-399
               

               
Cow position:
               
chr25:11319024-11318833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
201-414
               

               
Cow position:
               
chr25:21042408-21042195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 141
               

               
Conread position:
               
201-479
               

               
Cow position:
               
chr25:31732712-31732993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
201-485
               

               
Cow position:
               
chr25:12817397-12817110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
204-386
               

               
Cow position:
               
chr25:6121750-6121931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
206-452
               

               
Cow position:
               
chr25:36033455-36033206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
209-404
               

               
Cow position:
               
chr25:36138635-36138820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
209-425
               

               
Cow position:
               
chr25:21047335-21047123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chr25:5271761-5271573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 39
               

               
Conread position:
               
210-468
               

               
Cow position:
               
chr25:24008171-24008423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
211-431
               

               
Cow position:
               
chr25:13736301-13736520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 89
               

               
Conread position:
               
211-499
               

               
Cow position:
               
chr25:35625172-35625447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
212-392
               

               
Cow position:
               
chr25:36124696-36124508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 137
               

               
Conread position:
               
212-479
               

               
Cow position:
               
chr25:8918265-8918535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
212-479
               

               
Cow position:
               
chr25:9961159-9961435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 133
               

               
Conread position:
               
212-479
               

               
Cow position:
               
chr25:16001514-16001778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 122
               

               
Conread position:
               
212-491
               

               
Cow position:
               
chr25:9634910-9634649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr25:23323207-23323017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr25:3983047-3982852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 16
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr25:12824010-12824271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
220-460
               

               
Cow position:
               
chr25:7329552-7329306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
220-477
               

               
Cow position:
               
chr25:10138097-10137843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
220-479
               

               
Cow position:
               
chr25:13642309-13642573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
220-494
               

               
Cow position:
               
chr25:14224800-14225065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
222-414
               

               
Cow position:
               
chr25:12520963-12521153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
222-424
               

               
Cow position:
               
chr25:14945449-14945644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
222-475
               

               
Cow position:
               
chr25:4002803-4002543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
225-457
               

               
Cow position:
               
chr25:26112264-26112039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
229-440
               

               
Cow position:
               
chr25:12899753-12899537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
232-457
               

               
Cow position:
               
chr25:20395183-20394968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
233-485
               

               
Cow position:
               
chr25:41363999-41364242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
236-408
               

               
Cow position:
               
chr25:22332750-22332578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
240-475
               

               
Cow position:
               
chr25:10365772-10366005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
247-476
               

               
Cow position:
               
chr25:36026981-36026753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 92
               

               
Conread position:
               
247-479
               

               
Cow position:
               
chr25:23389307-23389534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
247-490
               

               
Cow position:
               
chr25:6424615-6424853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
138, 69
               

               
Conread position:
               
255-478
               

               
Cow position:
               
chr25:33839343-33839132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
257-414
               

               
Cow position:
               
chr25:35110163-35110322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
257-456
               

               
Cow position:
               
chr25:6255974-6256172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
257-479
               

               
Cow position:
               
chr25:12204432-12204213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
263-485
               

               
Cow position:
               
chr25:41392703-41392926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
268-407
               

               
Cow position:
               
chr25:11542865-11542725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
268-461
               

               
Cow position:
               
chr25:15286590-15286779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
112, 46
               

               
Conread position:
               
273-399
               

               
Cow position:
               
chr25:14931813-14931940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
274-462
               

               
Cow position:
               
chr25:35607777-35607964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
274-478
               

               
Cow position:
               
chr25:27622034-27621828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
110, 163
               

               
Conread position:
               
276-479
               

               
Cow position:
               
chr25:20060083-20060288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
59, 169
               

               
Conread position:
               
277-474
               

               
Cow position:
               
chr25:2596128-2595922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
279-479
               

               
Cow position:
               
chr25:8347449-8347252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
279-479
               

               
Cow position:
               
chr25:18448778-18448580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
282-479
               

               
Cow position:
               
chr25:24167964-24168155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
290-477
               

               
Cow position:
               
chr25:18491004-18490817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 84
               

               
Conread position:
               
298-445
               

               
Cow position:
               
chr25:16389369-16389514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
301-485
               

               
Cow position:
               
chr25:40407552-40407732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
310-489
               

               
Cow position:
               
chr25:433164-433343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
319-485
               

               
Cow position:
               
chr25:5271494-5271324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               
Show alignments to all cow chromosomes.