Cow genome map

Conread name: Mus1-POSM0100014_A02F

Conread position: 3-391
Cow position: chrX:41871307-41870933 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 254
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 251, 53

Conread position: 4-414
Cow position: chrX:25207612-25208010 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 280
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 82

Conread position: 5-479
Cow position: chrX:152154-151673 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 139

Conread position: 7-457
Cow position: chrX:33466868-33466407 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 84

Conread position: 10-364
Cow position: chrX:29230252-29229896 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 99

Conread position: 11-203
Cow position: chrX:5097553-5097750 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 20

Conread position: 11-479
Cow position: chrX:20887401-20887872 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 53

Conread position: 12-222
Cow position: chrX:4092162-4091954 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 23

Conread position: 12-246
Cow position: chrX:19018587-19018825 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 35, 0

Conread position: 12-320
Cow position: chrX:25037233-25036915 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 40, 0

Conread position: 12-352
Cow position: chrX:21328154-21327802 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 43, 24

Conread position: 12-386
Cow position: chrX:18204225-18204598 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 254
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 188, 55

Conread position: 12-479
Cow position: chrX:32019892-32020350 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 113

Conread position: 13-259
Cow position: chrX:42894162-42893917 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 43

Conread position: 13-327
Cow position: chrX:36866413-36866092 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 99

Conread position: 13-367
Cow position: chrX:24332012-24331662 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 57, 25

Conread position: 13-396
Cow position: chrX:29723991-29723596 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 39, 96

Conread position: 13-420
Cow position: chrX:4399358-4398956 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 97

Conread position: 13-423
Cow position: chrX:6407779-6407376 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 25

Conread position: 13-424
Cow position: chrX:22387003-22387421 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 193

Conread position: 13-456
Cow position: chrX:41790187-41790650 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 316
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 72

Conread position: 13-457
Cow position: chrX:27175240-27174788 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 101

Conread position: 13-479
Cow position: chrX:4268830-4269296 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 81

Conread position: 13-479
Cow position: chrX:15146959-15147414 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 13-479
Cow position: chrX:20677604-20677137 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 296
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 57, 92

Conread position: 13-479
Cow position: chrX:25035141-25035615 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 99

Conread position: 13-487
Cow position: chrX:9634951-9635417 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 107

Conread position: 13-490
Cow position: chrX:27705822-27705354 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 25

Conread position: 13-490
Cow position: chrX:34454899-34454430 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 309
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 71

Conread position: 14-241
Cow position: chrX:35285413-35285184 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 82

Conread position: 14-252
Cow position: chrX:32877140-32877367 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 87

Conread position: 14-282
Cow position: chrX:17956928-17956661 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 40, 86

Conread position: 14-337
Cow position: chrX:42855702-42855366 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 289

Conread position: 14-370
Cow position: chrX:4403557-4403195 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 38, 98

Conread position: 14-409
Cow position: chrX:36356343-36355957 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 96

Conread position: 14-491
Cow position: chrX:44055042-44054560 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 107

Conread position: 15-252
Cow position: chrX:6599536-6599782 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 15-252
Cow position: chrX:38587607-38587843 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 114

Conread position: 15-448
Cow position: chrX:161638-161223 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 72

Conread position: 16-341
Cow position: chrX:25282777-25283107 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 221
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 145

Conread position: 16-364
Cow position: chrX:38654193-38654543 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 161

Conread position: 16-380
Cow position: chrX:34315764-34315397 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 254
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 100

Conread position: 16-381
Cow position: chrX:43115386-43115021 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 80

Conread position: 16-414
Cow position: chrX:27145836-27145460 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 270
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 59, 40

Conread position: 16-420
Cow position: chrX:34792086-34792480 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 272
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 85

Conread position: 16-452
Cow position: chrX:1499891-1499468 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 38

Conread position: 16-461
Cow position: chrX:47046265-47046730 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 317
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 35, 19

Conread position: 16-479
Cow position: chrX:42246944-42247412 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 97

Conread position: 16-492
Cow position: chrX:27431687-27432160 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 77

Conread position: 17-250
Cow position: chrX:24170489-24170727 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 149

Conread position: 17-294
Cow position: chrX:11825407-11825686 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 181
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 108

Conread position: 17-357
Cow position: chrX:48071398-48071050 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 219
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 79

Conread position: 17-362
Cow position: chrX:17949256-17949601 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 236
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 37, 108

Conread position: 17-373
Cow position: chrX:40320642-40320283 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 226
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 14

Conread position: 17-374
Cow position: chrX:18111615-18111267 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 96

Conread position: 17-395
Cow position: chrX:34314257-34313889 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 78

Conread position: 17-399
Cow position: chrX:869946-870314 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 253
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 79

Conread position: 17-420
Cow position: chrX:22921557-22921144 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 269
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 67

Conread position: 17-424
Cow position: chrX:9770450-9770858 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 268
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 67

Conread position: 17-459
Cow position: chrX:46588056-46587609 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 66

Conread position: 17-463
Cow position: chrX:42492285-42492727 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 125

Conread position: 17-469
Cow position: chrX:11633918-11633460 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 89

Conread position: 17-473
Cow position: chrX:33001134-33000679 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 73

Conread position: 17-477
Cow position: chrX:11656314-11655860 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 85

Conread position: 17-477
Cow position: chrX:12290954-12290509 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 78

Conread position: 17-479
Cow position: chrX:11844000-11844469 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 317
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 46, 71

Conread position: 17-479
Cow position: chrX:20339659-20340119 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 77

Conread position: 17-479
Cow position: chrX:34565521-34565069 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 76

Conread position: 17-479
Cow position: chrX:44192206-44192671 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 322
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 97

Conread position: 17-483
Cow position: chrX:15546117-15545665 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 90

Conread position: 17-484
Cow position: chrX:17231973-17231501 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 79

Conread position: 17-485
Cow position: chrX:22813301-22812828 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 195

Conread position: 17-489
Cow position: chrX:33854990-33855471 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 75

Conread position: 17-489
Cow position: chrX:38935515-38935043 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 108

Conread position: 17-490
Cow position: chrX:34441217-34441689 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 73

Conread position: 17-490
Cow position: chrX:41878701-41879170 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 39

Conread position: 17-494
Cow position: chrX:23563554-23564038 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 108

Conread position: 18-255
Cow position: chrX:42449778-42450017 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 95

Conread position: 18-368
Cow position: chrX:4296589-4296945 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 232
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 113

Conread position: 18-371
Cow position: chrX:26881327-26881688 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 243
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 226

Conread position: 18-389
Cow position: chrX:45977159-45976782 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 244
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 46

Conread position: 18-461
Cow position: chrX:32330406-32329950 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 315
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 38, 86

Conread position: 18-461
Cow position: chrX:40035207-40035656 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 29

Conread position: 18-465
Cow position: chrX:6414267-6413833 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 298
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 52, 37

Conread position: 18-475
Cow position: chrX:31442604-31443045 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 18-477
Cow position: chrX:40183119-40183576 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 66

Conread position: 18-487
Cow position: chrX:30962640-30963108 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 78

Conread position: 18-489
Cow position: chrX:25815664-25816134 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 124

Conread position: 18-489
Cow position: chrX:30133089-30133562 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 38

Conread position: 19-232
Cow position: chrX:28068085-28067870 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 86

Conread position: 19-252
Cow position: chrX:3806912-3806682 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 79

Conread position: 19-362
Cow position: chrX:33654609-33654958 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 76

Conread position: 19-446
Cow position: chrX:7863345-7863768 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 290
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 18, 121

Conread position: 19-457
Cow position: chrX:3580174-3579738 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 19-457
Cow position: chrX:24365588-24366038 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 301
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 33, 120

Conread position: 19-479
Cow position: chrX:27446917-27446460 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 65

Conread position: 19-479
Cow position: chrX:40557424-40557904 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 242

Conread position: 19-484
Cow position: chrX:36976182-36975716 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 33

Conread position: 20-247
Cow position: chrX:1122314-1122538 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 32, 92

Conread position: 20-252
Cow position: chrX:11654000-11653764 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 89

Conread position: 20-288
Cow position: chrX:27074818-27075087 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 83

Conread position: 20-383
Cow position: chrX:40685096-40685463 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 36, 90

Conread position: 20-479
Cow position: chrX:7351534-7351071 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 179

Conread position: 20-485
Cow position: chrX:40826517-40826981 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 114

Conread position: 20-490
Cow position: chrX:38094293-38094764 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 21-240
Cow position: chrX:38302047-38301821 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 21-386
Cow position: chrX:5919719-5919361 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 241
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 34

Conread position: 21-394
Cow position: chrX:45875624-45875249 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 14, 75

Conread position: 21-460
Cow position: chrX:29541996-29542428 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 75

Conread position: 21-474
Cow position: chrX:41674329-41673880 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 51

Conread position: 21-477
Cow position: chrX:22075027-22074574 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 75

Conread position: 21-485
Cow position: chrX:45968369-45967928 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 42

Conread position: 21-489
Cow position: chrX:5637947-5638407 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 35

Conread position: 22-268
Cow position: chrX:42836407-42836164 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 16

Conread position: 22-304
Cow position: chrX:4109416-4109134 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 76

Conread position: 22-335
Cow position: chrX:6559225-6559532 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 30, 90

Conread position: 22-485
Cow position: chrX:45598377-45598838 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 79

Conread position: 22-492
Cow position: chrX:38218944-38218474 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 34

Conread position: 23-252
Cow position: chrX:35276216-35275986 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 98

Conread position: 23-305
Cow position: chrX:40108283-40108573 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 258

Conread position: 23-386
Cow position: chrX:41027390-41027022 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 73

Conread position: 23-461
Cow position: chrX:29601598-29602041 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 69

Conread position: 23-476
Cow position: chrX:21663525-21663084 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 309
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 33, 61

Conread position: 23-479
Cow position: chrX:34238956-34238493 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 96

Conread position: 23-485
Cow position: chrX:9251933-9252412 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 90

Conread position: 23-489
Cow position: chrX:27393788-27394252 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 274

Conread position: 24-347
Cow position: chrX:12095542-12095870 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 28, 88

Conread position: 24-471
Cow position: chrX:36283569-36283125 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 88

Conread position: 24-477
Cow position: chrX:7722203-7721758 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 56

Conread position: 24-479
Cow position: chrX:21593520-21593055 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 171

Conread position: 24-479
Cow position: chrX:46032499-46032946 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 296
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 32, 86

Conread position: 27-477
Cow position: chrX:44397237-44396789 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 89

Conread position: 28-427
Cow position: chrX:4278893-4279291 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 274
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 83

Conread position: 28-459
Cow position: chrX:842381-841950 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 94

Conread position: 29-479
Cow position: chrX:37489953-37489502 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 30-391
Cow position: chrX:37956068-37955693 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 264
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 41, 79

Conread position: 31-286
Cow position: chrX:48558968-48558709 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 64

Conread position: 31-337
Cow position: chrX:10516476-10516167 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 65

Conread position: 31-343
Cow position: chrX:20168777-20168463 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 79

Conread position: 31-344
Cow position: chrX:40680837-40680515 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 82

Conread position: 31-479
Cow position: chrX:31489743-31489284 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 82

Conread position: 31-488
Cow position: chrX:46532268-46532746 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 450

Conread position: 34-293
Cow position: chrX:4645695-4645957 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 18, 61

Conread position: 34-303
Cow position: chrX:44339102-44339379 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 110

Conread position: 34-336
Cow position: chrX:27261409-27261100 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 20, 61

Conread position: 41-363
Cow position: chrX:34222922-34222598 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 28, 52

Conread position: 47-479
Cow position: chrX:9416481-9416921 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 14

Conread position: 48-461
Cow position: chrX:10831279-10831708 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 51-328
Cow position: chrX:39220285-39220000 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 256

Conread position: 52-457
Cow position: chrX:32420409-32420012 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 57

Conread position: 52-463
Cow position: chrX:13868902-13868481 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 53

Conread position: 52-479
Cow position: chrX:8731292-8730851 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 41

Conread position: 52-479
Cow position: chrX:22822253-22821819 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 232

Conread position: 52-479
Cow position: chrX:31294371-31294770 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 51

Conread position: 52-489
Cow position: chrX:34543984-34543549 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 41

Conread position: 58-287
Cow position: chrX:18964633-18964864 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 55

Conread position: 58-287
Cow position: chrX:39180041-39180269 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 52

Conread position: 58-479
Cow position: chrX:21064474-21064058 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 284
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 14, 52

Conread position: 58-479
Cow position: chrX:31948742-31949159 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 64

Conread position: 58-487
Cow position: chrX:47344491-47344058 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 290
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 12, 189

Conread position: 58-491
Cow position: chrX:46770770-46771214 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 35

Conread position: 61-423
Cow position: chrX:31252597-31252245 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 49

Conread position: 61-479
Cow position: chrX:30922361-30921957 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 282
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 10, 32

Conread position: 61-479
Cow position: chrX:34503117-34502692 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 286

Conread position: 63-479
Cow position: chrX:12309198-12309617 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 47

Conread position: 69-408
Cow position: chrX:27228309-27227966 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 34

Conread position: 69-479
Cow position: chrX:5118318-5118713 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 283
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 143, 43

Conread position: 69-479
Cow position: chrX:21672742-21672323 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 69

Conread position: 69-489
Cow position: chrX:16416683-16416270 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 77-479
Cow position: chrX:42380938-42381328 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 25

Conread position: 78-479
Cow position: chrX:13647613-13648012 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 31

Conread position: 80-485
Cow position: chrX:33640145-33639737 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 29

Conread position: 84-419
Cow position: chrX:46433658-46433314 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 25

Conread position: 87-314
Cow position: chrX:15820759-15820531 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 166, 92

Conread position: 87-338
Cow position: chrX:45883806-45884065 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 87-479
Cow position: chrX:7718997-7718625 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 43

Conread position: 87-479
Cow position: chrX:17726139-17725750 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 34

Conread position: 87-489
Cow position: chrX:41884245-41884656 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 216

Conread position: 87-491
Cow position: chrX:5872482-5872071 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 199

Conread position: 87-492
Cow position: chrX:878215-878612 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 225

Conread position: 87-501
Cow position: chrX:27771803-27772206 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 78

Conread position: 88-387
Cow position: chrX:42873549-42873256 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 109

Conread position: 88-439
Cow position: chrX:42235359-42235722 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 32

Conread position: 88-479
Cow position: chrX:8797413-8797020 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 108

Conread position: 89-451
Cow position: chrX:4515854-4515467 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 262
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 40, 74

Conread position: 89-462
Cow position: chrX:9425591-9425953 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 166, 23

Conread position: 89-471
Cow position: chrX:23092031-23091661 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 5

Conread position: 89-479
Cow position: chrX:4768894-4768522 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 162, 18

Conread position: 89-479
Cow position: chrX:35543050-35542663 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 111

Conread position: 90-424
Cow position: chrX:45099292-45098938 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 233
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 92-304
Cow position: chrX:32977926-32978133 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 92-331
Cow position: chrX:16575272-16575040 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 157, 0

Conread position: 92-334
Cow position: chrX:23562793-23562549 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 6, 174

Conread position: 92-336
Cow position: chrX:37129429-37129181 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 160, 222

Conread position: 92-429
Cow position: chrX:24287774-24288111 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 163, 32

Conread position: 92-435
Cow position: chrX:36068179-36067835 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 248

Conread position: 92-479
Cow position: chrX:6278338-6278734 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 253

Conread position: 92-479
Cow position: chrX:31250548-31250164 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 252

Conread position: 92-483
Cow position: chrX:35269021-35268658 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 273
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 104, 0

Conread position: 92-486
Cow position: chrX:45175010-45174609 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 263
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 18

Conread position: 92-488
Cow position: chrX:38549607-38549211 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 241

Conread position: 93-308
Cow position: chrX:44702907-44703132 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 93-485
Cow position: chrX:28134497-28134112 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 72

Conread position: 94-275
Cow position: chrX:20743763-20743575 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 94-314
Cow position: chrX:29733433-29733651 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 160

Conread position: 94-376
Cow position: chrX:6259988-6260282 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 16, 123

Conread position: 94-395
Cow position: chrX:11084907-11085201 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 158, 27

Conread position: 94-440
Cow position: chrX:43730066-43730404 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 121

Conread position: 94-463
Cow position: chrX:34412004-34411626 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 245

Conread position: 94-468
Cow position: chrX:14599690-14599312 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 39

Conread position: 94-476
Cow position: chrX:24424245-24424613 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 263
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 289, 15

Conread position: 94-477
Cow position: chrX:13382483-13382098 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 98

Conread position: 94-477
Cow position: chrX:34402164-34401771 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 113

Conread position: 94-488
Cow position: chrX:45502302-45501911 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 15

Conread position: 94-491
Cow position: chrX:40269650-40269234 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 249

Conread position: 95-337
Cow position: chrX:29050405-29050158 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 101

Conread position: 95-343
Cow position: chrX:11317811-11318062 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 162
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 40

Conread position: 95-424
Cow position: chrX:35885570-35885903 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 184

Conread position: 95-448
Cow position: chrX:29544720-29545077 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 40

Conread position: 95-457
Cow position: chrX:31729599-31729249 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 148, 152

Conread position: 95-457
Cow position: chrX:38853355-38852990 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 92

Conread position: 95-462
Cow position: chrX:29121204-29120846 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 249

Conread position: 95-485
Cow position: chrX:31436631-31436246 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 196

Conread position: 96-350
Cow position: chrX:23113440-23113176 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 153, 15

Conread position: 96-448
Cow position: chrX:37780954-37781315 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 16

Conread position: 97-395
Cow position: chrX:38066297-38066594 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 188
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 194

Conread position: 97-498
Cow position: chrX:45113777-45113381 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 249

Conread position: 98-308
Cow position: chrX:25788749-25788956 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 160

Conread position: 98-472
Cow position: chrX:37574996-37574635 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 258
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 12, 144

Conread position: 99-308
Cow position: chrX:39352938-39352720 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 135, 84

Conread position: 102-306
Cow position: chrX:22914892-22915094 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 147, 55

Conread position: 102-477
Cow position: chrX:28878024-28878388 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 98

Conread position: 102-479
Cow position: chrX:38226960-38227318 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 0

Conread position: 106-415
Cow position: chrX:41068871-41068563 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 94

Conread position: 109-479
Cow position: chrX:29289721-29289348 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 26

Conread position: 109-494
Cow position: chrX:40480724-40481114 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 24

Conread position: 110-308
Cow position: chrX:27511570-27511367 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 91

Conread position: 110-311
Cow position: chrX:6463740-6463548 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 86

Conread position: 110-316
Cow position: chrX:19097078-19097290 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 95, 9

Conread position: 110-388
Cow position: chrX:7710397-7710680 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 110-433
Cow position: chrX:32821170-32820847 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 96

Conread position: 110-457
Cow position: chrX:11717641-11717989 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 221

Conread position: 110-474
Cow position: chrX:6265457-6265809 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 144, 78

Conread position: 110-477
Cow position: chrX:5900604-5900231 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 85

Conread position: 110-477
Cow position: chrX:15007008-15007377 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 20

Conread position: 110-478
Cow position: chrX:3654750-3654377 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 110-479
Cow position: chrX:17964380-17964750 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 183

Conread position: 110-479
Cow position: chrX:38964250-38963881 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 235

Conread position: 110-479
Cow position: chrX:43527650-43527275 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 91

Conread position: 110-484
Cow position: chrX:9201690-9201314 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 255
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 150, 227

Conread position: 110-489
Cow position: chrX:4043725-4044086 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 84

Conread position: 110-489
Cow position: chrX:23513879-23514256 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 25

Conread position: 110-494
Cow position: chrX:41238213-41238604 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 81

Conread position: 111-440
Cow position: chrX:44656816-44657154 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 94, 230

Conread position: 111-451
Cow position: chrX:43779711-43780053 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 140, 34

Conread position: 111-489
Cow position: chrX:29032549-29032179 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 251
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 131, 25

Conread position: 112-399
Cow position: chrX:9365536-9365822 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 145, 165

Conread position: 112-460
Cow position: chrX:14973606-14973944 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 245
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 84, 89

Conread position: 112-461
Cow position: chrX:45846241-45845885 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 237
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 139, 103

Conread position: 112-471
Cow position: chrX:1503467-1503119 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 95

Conread position: 112-471
Cow position: chrX:10959255-10959623 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 210

Conread position: 112-474
Cow position: chrX:1615908-1616271 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 23

Conread position: 112-476
Cow position: chrX:46700709-46701044 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 244, 84

Conread position: 112-479
Cow position: chrX:5017282-5017636 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 257
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 143, 39

Conread position: 112-479
Cow position: chrX:17542099-17541736 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 253
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 54

Conread position: 112-479
Cow position: chrX:17630661-17631030 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 67, 94

Conread position: 112-479
Cow position: chrX:17662458-17662825 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 79

Conread position: 112-489
Cow position: chrX:20697469-20697846 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 173

Conread position: 112-490
Cow position: chrX:14883815-14884201 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 43, 230

Conread position: 112-493
Cow position: chrX:37232547-37232169 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 128

Conread position: 112-494
Cow position: chrX:30420812-30421183 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 137, 96

Conread position: 113-294
Cow position: chrX:19943097-19943283 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 137, 60

Conread position: 113-340
Cow position: chrX:29549412-29549639 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 27

Conread position: 113-380
Cow position: chrX:38728873-38728608 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 129, 143

Conread position: 113-400
Cow position: chrX:21986152-21986441 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 133, 103

Conread position: 113-400
Cow position: chrX:29680122-29680409 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 229

Conread position: 113-427
Cow position: chrX:36514753-36515074 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 209
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 73, 261

Conread position: 113-457
Cow position: chrX:4825697-4826034 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 238
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 199, 60

Conread position: 113-471
Cow position: chrX:46072678-46073042 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 233

Conread position: 113-479
Cow position: chrX:41123198-41122844 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 83, 87

Conread position: 113-489
Cow position: chrX:37119731-37119361 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 264
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 143, 15

Conread position: 113-492
Cow position: chrX:11073052-11073432 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 177

Conread position: 114-353
Cow position: chrX:16348434-16348672 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 16

Conread position: 114-356
Cow position: chrX:48044378-48044619 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 141, 26

Conread position: 114-369
Cow position: chrX:5679434-5679684 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 138, 80

Conread position: 114-390
Cow position: chrX:11614831-11614560 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 64

Conread position: 114-440
Cow position: chrX:23785785-23785464 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 52

Conread position: 114-463
Cow position: chrX:30543146-30543499 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 250
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 120, 233

Conread position: 114-477
Cow position: chrX:6690122-6690474 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 159

Conread position: 114-477
Cow position: chrX:47054387-47054754 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 91

Conread position: 114-485
Cow position: chrX:15815219-15814863 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 28

Conread position: 115-432
Cow position: chrX:7336978-7336645 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 131, 175

Conread position: 115-468
Cow position: chrX:37910581-37910235 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 9

Conread position: 116-453
Cow position: chrX:7278047-7277717 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 174

Conread position: 116-474
Cow position: chrX:1514283-1514624 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 75

Conread position: 116-479
Cow position: chrX:11454913-11455280 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 257
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 129, 55

Conread position: 116-479
Cow position: chrX:43568055-43567711 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 80, 85

Conread position: 117-485
Cow position: chrX:35224430-35224068 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 257
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 138, 13

Conread position: 118-337
Cow position: chrX:31515308-31515080 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 80, 179

Conread position: 118-479
Cow position: chrX:36778532-36778178 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 139, 30

Conread position: 118-484
Cow position: chrX:20151990-20151617 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 74

Conread position: 118-490
Cow position: chrX:917234-917608 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 83

Conread position: 121-386
Cow position: chrX:616128-616397 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 221

Conread position: 121-403
Cow position: chrX:20584459-20584166 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 136, 222

Conread position: 121-405
Cow position: chrX:23561989-23561723 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 59, 190

Conread position: 121-479
Cow position: chrX:47481927-47481571 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 77

Conread position: 121-490
Cow position: chrX:10411853-10412225 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 81

Conread position: 121-490
Cow position: chrX:35413741-35413393 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 75

Conread position: 122-490
Cow position: chrX:19690345-19689979 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 166

Conread position: 123-496
Cow position: chrX:39558220-39558593 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 42

Conread position: 124-479
Cow position: chrX:18694803-18695149 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 68

Conread position: 125-336
Cow position: chrX:20881818-20882025 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 130, 40

Conread position: 125-364
Cow position: chrX:9650897-9651138 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 124, 174

Conread position: 126-479
Cow position: chrX:42171170-42171527 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 31

Conread position: 127-480
Cow position: chrX:32431749-32431398 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 73

Conread position: 131-477
Cow position: chrX:11082501-11082839 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 69

Conread position: 133-489
Cow position: chrX:26625552-26625915 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 172

Conread position: 136-489
Cow position: chrX:43049447-43049104 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 61

Conread position: 137-492
Cow position: chrX:25570879-25571236 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 25

Conread position: 138-443
Cow position: chrX:39126440-39126144 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 122, 139

Conread position: 138-448
Cow position: chrX:45149282-45148977 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 237, 114

Conread position: 138-448
Cow position: chrX:47300789-47301101 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 108

Conread position: 138-448
Cow position: chrX:47302763-47303077 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 102, 108

Conread position: 138-474
Cow position: chrX:44736886-44737214 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 232, 77

Conread position: 138-477
Cow position: chrX:48194921-48195267 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 239
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 65, 57

Conread position: 138-478
Cow position: chrX:11856544-11856202 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 166

Conread position: 138-479
Cow position: chrX:44834682-44835044 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 58, 97

Conread position: 138-479
Cow position: chrX:45403711-45404062 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 108

Conread position: 138-480
Cow position: chrX:46722620-46722970 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 108

Conread position: 138-489
Cow position: chrX:22624590-22624243 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 165

Conread position: 138-490
Cow position: chrX:8925813-8925464 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 205

Conread position: 138-490
Cow position: chrX:38936814-38936462 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 58

Conread position: 138-494
Cow position: chrX:25338301-25337936 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 24

Conread position: 138-494
Cow position: chrX:48652607-48652970 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 104, 108

Conread position: 139-393
Cow position: chrX:21566520-21566260 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 101

Conread position: 139-477
Cow position: chrX:7572018-7571680 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 202

Conread position: 139-489
Cow position: chrX:21004797-21004446 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 152

Conread position: 142-491
Cow position: chrX:32170779-32171124 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 96, 49

Conread position: 143-374
Cow position: chrX:27945945-27946182 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 103

Conread position: 143-388
Cow position: chrX:36393233-36393484 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 97, 33

Conread position: 143-407
Cow position: chrX:47165777-47166043 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 64

Conread position: 143-413
Cow position: chrX:22453989-22454252 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 131, 49

Conread position: 143-446
Cow position: chrX:47484155-47484467 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 207
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 97, 103

Conread position: 143-449
Cow position: chrX:40809802-40809488 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 82, 103

Conread position: 143-461
Cow position: chrX:16996601-16996296 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 97, 113

Conread position: 143-463
Cow position: chrX:1055272-1055601 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 53, 58

Conread position: 143-463
Cow position: chrX:34662737-34663056 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 103

Conread position: 143-489
Cow position: chrX:15485525-15485866 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 57

Conread position: 143-490
Cow position: chrX:13913184-13912842 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 158

Conread position: 143-491
Cow position: chrX:2467993-2467638 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 144

Conread position: 143-492
Cow position: chrX:47873227-47873582 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 97, 103

Conread position: 146-426
Cow position: chrX:47186218-47186496 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 108, 142

Conread position: 148-494
Cow position: chrX:27680502-27680160 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 162

Conread position: 150-489
Cow position: chrX:21642380-21642716 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 112, 103

Conread position: 150-489
Cow position: chrX:44873459-44873788 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 234
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 94, 46

Conread position: 156-448
Cow position: chrX:12405285-12405574 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 96, 243

Conread position: 160-474
Cow position: chrX:6488668-6488363 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 34

Conread position: 162-390
Cow position: chrX:27685339-27685108 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 12, 40

Conread position: 162-429
Cow position: chrX:36061250-36060973 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 0

Conread position: 162-488
Cow position: chrX:7646341-7646021 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 129

Conread position: 162-489
Cow position: chrX:26440695-26441018 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 34

Conread position: 164-489
Cow position: chrX:20710162-20709834 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 113, 60

Conread position: 165-335
Cow position: chrX:1572052-1572224 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 169-358
Cow position: chrX:47657469-47657277 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 78, 143

Conread position: 169-362
Cow position: chrX:4991930-4992127 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 131

Conread position: 169-485
Cow position: chrX:42507565-42507881 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 87

Conread position: 170-489
Cow position: chrX:618920-619246 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 34

Conread position: 173-325
Cow position: chrX:13136153-13136309 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 93

Conread position: 173-334
Cow position: chrX:35590677-35590843 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 98

Conread position: 173-377
Cow position: chrX:19003372-19003174 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 80, 22

Conread position: 173-475
Cow position: chrX:11589509-11589816 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 169

Conread position: 176-479
Cow position: chrX:24105700-24105398 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 93

Conread position: 179-443
Cow position: chrX:37541191-37540932 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 21

Conread position: 179-461
Cow position: chrX:6234376-6234659 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 167

Conread position: 182-358
Cow position: chrX:20790983-20790814 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 14, 19

Conread position: 182-479
Cow position: chrX:8900092-8899796 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 70, 14

Conread position: 183-485
Cow position: chrX:26875812-26876115 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 132

Conread position: 184-479
Cow position: chrX:42500566-42500266 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 56

Conread position: 187-479
Cow position: chrX:19188996-19188708 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 66

Conread position: 191-446
Cow position: chrX:30832790-30833041 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 106

Conread position: 191-457
Cow position: chrX:157712-157982 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 7

Conread position: 191-479
Cow position: chrX:41166901-41167192 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 154

Conread position: 192-479
Cow position: chrX:12018352-12018047 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 62, 222

Conread position: 193-489
Cow position: chrX:9855356-9855062 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 58, 5

Conread position: 193-489
Cow position: chrX:9954197-9953903 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 7

Conread position: 194-419
Cow position: chrX:14003590-14003813 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 191, 19

Conread position: 194-479
Cow position: chrX:12116106-12115810 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 198-479
Cow position: chrX:42875037-42874750 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 268

Conread position: 199-471
Cow position: chrX:42461691-42461966 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 146

Conread position: 200-449
Cow position: chrX:36961693-36961437 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 200-463
Cow position: chrX:8070647-8070913 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 141

Conread position: 200-477
Cow position: chrX:27442504-27442781 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 14, 142

Conread position: 200-490
Cow position: chrX:28845885-28845607 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 221
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 145

Conread position: 200-492
Cow position: chrX:48243414-48243693 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 205
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 57, 121

Conread position: 201-477
Cow position: chrX:27516581-27516306 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 142

Conread position: 201-478
Cow position: chrX:35681393-35681118 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 187

Conread position: 201-489
Cow position: chrX:39938472-39938755 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 125

Conread position: 202-444
Cow position: chrX:13785310-13785548 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 139

Conread position: 202-476
Cow position: chrX:15139497-15139770 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 135

Conread position: 202-478
Cow position: chrX:47191357-47191626 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 102

Conread position: 202-479
Cow position: chrX:40452168-40452441 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 52

Conread position: 202-490
Cow position: chrX:19015487-19015205 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 71, 136

Conread position: 202-494
Cow position: chrX:34270452-34270172 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 53, 93

Conread position: 207-483
Cow position: chrX:9997288-9997565 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 130

Conread position: 208-418
Cow position: chrX:41992002-41992209 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 65

Conread position: 208-477
Cow position: chrX:17498129-17497870 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 208
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 44, 73

Conread position: 208-479
Cow position: chrX:41199152-41198876 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 16, 94

Conread position: 210-460
Cow position: chrX:40567642-40567390 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 87

Conread position: 210-479
Cow position: chrX:28157543-28157257 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 121

Conread position: 210-493
Cow position: chrX:32127950-32128222 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 78

Conread position: 211-359
Cow position: chrX:35848605-35848453 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 25

Conread position: 211-453
Cow position: chrX:28835861-28836103 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 111

Conread position: 211-490
Cow position: chrX:40648027-40647739 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 258

Conread position: 211-492
Cow position: chrX:42994654-42994373 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 109

Conread position: 211-494
Cow position: chrX:47756887-47757172 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 203
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 42, 99

Conread position: 212-400
Cow position: chrX:42760028-42759834 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 43

Conread position: 212-476
Cow position: chrX:29509398-29509669 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 34

Conread position: 212-479
Cow position: chrX:14925043-14924772 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 137

Conread position: 214-454
Cow position: chrX:17908250-17908487 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 38, 74

Conread position: 216-423
Cow position: chrX:37750218-37750426 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 140

Conread position: 216-443
Cow position: chrX:45875034-45874806 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 37, 125

Conread position: 216-448
Cow position: chrX:4091676-4091450 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 216-457
Cow position: chrX:26286017-26285773 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 85

Conread position: 216-485
Cow position: chrX:3653797-3653529 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 36, 107

Conread position: 216-489
Cow position: chrX:23970415-23970151 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 87

Conread position: 216-492
Cow position: chrX:47379431-47379708 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 171

Conread position: 216-493
Cow position: chrX:41743950-41743671 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 222-416
Cow position: chrX:35969056-35969249 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 121

Conread position: 222-479
Cow position: chrX:37048551-37048809 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 34, 23

Conread position: 222-492
Cow position: chrX:38439511-38439232 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 120

Conread position: 225-457
Cow position: chrX:20752281-20752053 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 112

Conread position: 225-477
Cow position: chrX:40116444-40116199 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 114, 0

Conread position: 225-488
Cow position: chrX:2383512-2383252 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 145, 108

Conread position: 227-479
Cow position: chrX:23497642-23497891 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 117

Conread position: 232-364
Cow position: chrX:32747703-32747570 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 110

Conread position: 242-479
Cow position: chrX:35387893-35388135 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 96

Conread position: 245-479
Cow position: chrX:42338942-42339164 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 12, 42

Conread position: 246-384
Cow position: chrX:36723088-36723224 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 246-477
Cow position: chrX:28098114-28097899 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 247-440
Cow position: chrX:1505711-1505523 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 9, 41

Conread position: 255-476
Cow position: chrX:46315384-46315604 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 128, 83

Conread position: 255-478
Cow position: chrX:35284613-35284390 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 179
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 207, 78

Conread position: 255-479
Cow position: chrX:19019112-19019338 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 120

Conread position: 256-437
Cow position: chrX:31256857-31256681 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 256-477
Cow position: chrX:21665602-21665819 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 0

Conread position: 257-478
Cow position: chrX:35609980-35609759 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 82

Conread position: 263-487
Cow position: chrX:48684239-48684459 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 15, 77

Conread position: 264-461
Cow position: chrX:41403963-41403763 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 112, 196

Conread position: 264-461
Cow position: chrX:41410511-41410311 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 112, 196

Conread position: 265-460
Cow position: chrX:44063737-44063926 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 265-489
Cow position: chrX:33020467-33020248 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 268-477
Cow position: chrX:45566616-45566404 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 107, 28

Conread position: 268-489
Cow position: chrX:25411821-25411602 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 178
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 137, 64

Conread position: 273-460
Cow position: chrX:18195910-18195730 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 173, 37

Conread position: 274-479
Cow position: chrX:27106237-27106030 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 111, 65

Conread position: 275-457
Cow position: chrX:16541698-16541884 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 106, 0

Conread position: 276-490
Cow position: chrX:45043533-45043321 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 99, 39

Conread position: 279-489
Cow position: chrX:11806044-11806255 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 93, 56

Conread position: 283-478
Cow position: chrX:4123803-4123608 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 53, 97

Conread position: 286-489
Cow position: chrX:2206588-2206782 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 0

Conread position: 290-475
Cow position: chrX:16324006-16324187 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 298-480
Cow position: chrX:42855365-42855179 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 87, 0

Conread position: 298-490
Cow position: chrX:6640080-6639885 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 0

Conread position: 335-479
Cow position: chrX:18812170-18812030 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 110, 0

Show alignments to all cow chromosomes.