Cow genome map
Conread name: | OvF1-UMC-pd12fol-013-f01 |
Conread position: | 1-315 |
Cow position: | chr10:54930991-54930691 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 46 |
Conread position: | 1-317 |
Cow position: | chr10:38344154-38343837 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 110 |
Conread position: | 1-322 |
Cow position: | chr10:36469245-36468936 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 223 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 203, 72 |
Conread position: | 1-331 |
Cow position: | chr10:29011447-29011131 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 239 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 313, 110 |
Conread position: | 1-332 |
Cow position: | chr10:50135778-50136105 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 102 |
Conread position: | 1-332 |
Cow position: | chr10:57988789-57988458 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 110 |
Conread position: | 2-321 |
Cow position: | chr10:40641169-40641478 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 227 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 78, 39 |
Conread position: | 2-329 |
Cow position: | chr10:24311157-24310851 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 227 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 48, 112 |
Conread position: | 2-332 |
Cow position: | chr10:10583325-10583655 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 11 |
Conread position: | 2-332 |
Cow position: | chr10:28256210-28255878 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 108 |
Conread position: | 2-332 |
Cow position: | chr10:39181002-39181334 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 2-332 |
Cow position: | chr10:62407569-62407244 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 11 |
Conread position: | 3-158 |
Cow position: | chr10:8291144-8291295 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 3-172 |
Cow position: | chr10:38537289-38537124 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 12, 20 |
Conread position: | 3-201 |
Cow position: | chr10:279400-279203 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 142 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 186, 107 |
Conread position: | 3-241 |
Cow position: | chr10:16926740-16926979 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 175 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 137, 108 |
Conread position: | 3-304 |
Cow position: | chr10:32701935-32702230 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 3-317 |
Cow position: | chr10:14334638-14334314 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 3-321 |
Cow position: | chr10:1378713-1379021 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 56 |
Conread position: | 3-321 |
Cow position: | chr10:21488173-21488483 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 91 |
Conread position: | 3-322 |
Cow position: | chr10:19512788-19513106 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 3-322 |
Cow position: | chr10:30684285-30683967 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 110 |
Conread position: | 3-324 |
Cow position: | chr10:7280895-7280583 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 3-325 |
Cow position: | chr10:16477969-16478277 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 234 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 185, 61 |
Conread position: | 3-332 |
Cow position: | chr10:14805053-14805384 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 107 |
Conread position: | 3-332 |
Cow position: | chr10:19840890-19841217 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 104 |
Conread position: | 3-332 |
Cow position: | chr10:22102444-22102772 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 108 |
Conread position: | 3-332 |
Cow position: | chr10:29845437-29845117 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 30 |
Conread position: | 3-332 |
Cow position: | chr10:40398206-40398526 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 228 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 303, 108 |
Conread position: | 3-332 |
Cow position: | chr10:55094478-55094804 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 61 |
Conread position: | 6-324 |
Cow position: | chr10:58812541-58812237 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 216 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 6-331 |
Cow position: | chr10:32558559-32558887 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 231 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 183, 25 |
Conread position: | 8-255 |
Cow position: | chr10:27664054-27663808 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 183 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 132, 102 |
Conread position: | 8-332 |
Cow position: | chr10:21739535-21739222 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 230 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 181, 102 |
Conread position: | 10-289 |
Cow position: | chr10:38544711-38544444 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 201 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 180, 103 |
Conread position: | 10-332 |
Cow position: | chr10:126502-126818 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 46 |
Conread position: | 10-332 |
Cow position: | chr10:37771100-37771422 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 101 |
Conread position: | 11-190 |
Cow position: | chr10:42750035-42750210 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 171, 60 |
Conread position: | 11-268 |
Cow position: | chr10:31524984-31525226 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 189 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 11-295 |
Cow position: | chr10:1665316-1665034 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-316 |
Cow position: | chr10:60361113-60361407 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 211 |
Alignm E-value: | 9e-35 |
Alignm gaps (pig, cow): | 177, 91 |
Conread position: | 11-317 |
Cow position: | chr10:47908149-47908454 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 76 |
Conread position: | 11-317 |
Cow position: | chr10:57502025-57502323 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 216 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 171, 100 |
Conread position: | 11-322 |
Cow position: | chr10:11684416-11684102 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 99 |
Conread position: | 11-324 |
Cow position: | chr10:39815183-39814871 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 100 |
Conread position: | 11-329 |
Cow position: | chr10:39778900-39778588 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 102 |
Conread position: | 11-330 |
Cow position: | chr10:2119798-2119473 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 141 |
Conread position: | 11-331 |
Cow position: | chr10:39040080-39039765 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 150 |
Conread position: | 11-332 |
Cow position: | chr10:7897267-7896948 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr10:20375617-20375304 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 101 |
Conread position: | 11-332 |
Cow position: | chr10:41568316-41568639 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr10:41878138-41878462 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 102 |
Conread position: | 11-332 |
Cow position: | chr10:57556120-57555797 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 12-310 |
Cow position: | chr10:48397882-48397591 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 207 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 95, 115 |
Conread position: | 15-188 |
Cow position: | chr10:29109923-29109761 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 15-317 |
Cow position: | chr10:28946704-28946996 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 219 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 173, 52 |
Conread position: | 15-317 |
Cow position: | chr10:64146148-64146446 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 97 |
Conread position: | 15-332 |
Cow position: | chr10:20369855-20369566 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 230 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 15-332 |
Cow position: | chr10:53321175-53320858 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 97 |
Conread position: | 16-321 |
Cow position: | chr10:51782190-51781887 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 35 |
Conread position: | 16-329 |
Cow position: | chr10:53485992-53485699 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 215 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 11, 56 |
Conread position: | 17-272 |
Cow position: | chr10:55285183-55285434 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 94 |
Conread position: | 17-317 |
Cow position: | chr10:29722823-29722532 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 208 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 57, 99 |
Conread position: | 17-321 |
Cow position: | chr10:14843002-14843289 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 210 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 275, 94 |
Conread position: | 17-322 |
Cow position: | chr10:32429952-32430241 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 215 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 298, 90 |
Conread position: | 17-331 |
Cow position: | chr10:37307809-37308113 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 208 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 173, 93 |
Conread position: | 17-331 |
Cow position: | chr10:39878207-39877881 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 225 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 67, 10 |
Conread position: | 17-331 |
Cow position: | chr10:40151031-40150731 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 100 |
Conread position: | 18-332 |
Cow position: | chr10:29631576-29631262 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 92 |
Conread position: | 19-228 |
Cow position: | chr10:17433580-17433788 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 162 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 170, 92 |
Conread position: | 19-331 |
Cow position: | chr10:38849513-38849810 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 225 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 169, 94 |
Conread position: | 25-324 |
Cow position: | chr10:33870514-33870812 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 85 |
Conread position: | 25-329 |
Cow position: | chr10:42111650-42111952 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 46 |
Conread position: | 26-322 |
Cow position: | chr10:21898856-21898579 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 206 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 233, 72 |
Conread position: | 38-321 |
Cow position: | chr10:20382776-20382505 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 217 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 151, 75 |
Conread position: | 52-315 |
Cow position: | chr10:6538643-6538912 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 96 |
Conread position: | 56-331 |
Cow position: | chr10:21078885-21079153 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 189 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 98, 61 |
Conread position: | 62-332 |
Cow position: | chr10:29109702-29109448 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 206 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 127, 41 |
Conread position: | 64-332 |
Cow position: | chr10:14862938-14863194 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 202 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 171, 47 |
Conread position: | 83-328 |
Cow position: | chr10:41774319-41774073 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 168 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 90, 30 |
Show alignments to all cow chromosomes.