Cow genome map
Conread name: | OvF1-UMC-pd12fol-013-f01 |
Conread position: | 1-161 |
Cow position: | chr11:32982981-32982825 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 118 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 1-317 |
Cow position: | chr11:26070203-26069886 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 93 |
Conread position: | 1-327 |
Cow position: | chr11:40775154-40774830 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 112 |
Conread position: | 1-332 |
Cow position: | chr11:26124084-26123749 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 113 |
Conread position: | 1-332 |
Cow position: | chr11:38834589-38834270 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 115 |
Conread position: | 2-309 |
Cow position: | chr11:9601465-9601178 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 231 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 61, 11 |
Conread position: | 2-322 |
Cow position: | chr11:43513782-43513458 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 2-323 |
Cow position: | chr11:20733392-20733072 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 2-331 |
Cow position: | chr11:18887701-18888007 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 233 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 219, 16 |
Conread position: | 2-332 |
Cow position: | chr11:11988981-11989310 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 2-332 |
Cow position: | chr11:17106836-17106509 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 2-332 |
Cow position: | chr11:30253079-30253406 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 109 |
Conread position: | 2-332 |
Cow position: | chr11:41169845-41169518 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 2-332 |
Cow position: | chr11:76373141-76372823 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 44 |
Conread position: | 3-264 |
Cow position: | chr11:31861749-31862018 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 206 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 109, 220 |
Conread position: | 3-290 |
Cow position: | chr11:42363597-42363883 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 196 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 150, 55 |
Conread position: | 3-317 |
Cow position: | chr11:72310186-72309878 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 3-332 |
Cow position: | chr11:1495183-1494856 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 108 |
Conread position: | 3-332 |
Cow position: | chr11:3493836-3494167 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 107 |
Conread position: | 3-332 |
Cow position: | chr11:10848298-10848630 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 96 |
Conread position: | 3-332 |
Cow position: | chr11:23880877-23881205 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 108 |
Conread position: | 3-332 |
Cow position: | chr11:24394161-24394493 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 108 |
Conread position: | 3-332 |
Cow position: | chr11:29667758-29667432 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 110 |
Conread position: | 3-332 |
Cow position: | chr11:32452675-32453004 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 107 |
Conread position: | 3-332 |
Cow position: | chr11:44582487-44582164 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 43 |
Conread position: | 3-332 |
Cow position: | chr11:52420250-52420580 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 108 |
Conread position: | 3-332 |
Cow position: | chr11:53431202-53430853 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 253 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 81, 109 |
Conread position: | 3-332 |
Cow position: | chr11:71330443-71330773 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 105 |
Conread position: | 3-332 |
Cow position: | chr11:85392978-85392656 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 108 |
Conread position: | 4-323 |
Cow position: | chr11:64355671-64355979 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 217 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 46, 109 |
Conread position: | 6-274 |
Cow position: | chr11:14728197-14727938 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 178 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 6-302 |
Cow position: | chr11:75554148-75553854 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 211 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 36, 108 |
Conread position: | 8-115 |
Cow position: | chr11:44490766-44490659 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 86 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 10-322 |
Cow position: | chr11:12357559-12357246 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 101 |
Conread position: | 10-329 |
Cow position: | chr11:26548380-26548697 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 101 |
Conread position: | 10-330 |
Cow position: | chr11:20506083-20506413 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 232 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 100, 313 |
Conread position: | 10-330 |
Cow position: | chr11:20511459-20511788 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 232 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 100, 307 |
Conread position: | 10-332 |
Cow position: | chr11:58135251-58135572 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 101 |
Conread position: | 10-332 |
Cow position: | chr11:63654479-63654156 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 89 |
Conread position: | 11-197 |
Cow position: | chr11:37476126-37475943 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 136 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 136, 99 |
Conread position: | 11-210 |
Cow position: | chr11:28108993-28109191 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 148 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-311 |
Cow position: | chr11:87142437-87142730 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 22 |
Conread position: | 11-317 |
Cow position: | chr11:33977600-33977296 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 224 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 171, 102 |
Conread position: | 11-321 |
Cow position: | chr11:17547018-17547327 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 100 |
Conread position: | 11-321 |
Cow position: | chr11:67845715-67845407 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-324 |
Cow position: | chr11:28228910-28228601 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 11-324 |
Cow position: | chr11:29613138-29612828 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-325 |
Cow position: | chr11:50026892-50026570 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 225 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 171, 103 |
Conread position: | 11-332 |
Cow position: | chr11:9733822-9733503 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 99 |
Conread position: | 11-332 |
Cow position: | chr11:44252653-44252975 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 101 |
Conread position: | 11-332 |
Cow position: | chr11:44518009-44517686 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr11:53286312-53285996 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 102 |
Conread position: | 11-332 |
Cow position: | chr11:57627197-57626874 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr11:61400222-61399909 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 228 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr11:73134145-73134481 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 242 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 177, 99 |
Conread position: | 12-331 |
Cow position: | chr11:3856078-3856389 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 233 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 176, 25 |
Conread position: | 15-318 |
Cow position: | chr11:39804598-39804884 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 218 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 175, 71 |
Conread position: | 15-319 |
Cow position: | chr11:21898983-21898683 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 77 |
Conread position: | 15-327 |
Cow position: | chr11:66729955-66730256 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 84 |
Conread position: | 16-317 |
Cow position: | chr11:30122982-30122685 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 95 |
Conread position: | 16-323 |
Cow position: | chr11:47759417-47759114 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 97 |
Conread position: | 16-323 |
Cow position: | chr11:67154549-67154846 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 224 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 155, 68 |
Conread position: | 16-332 |
Cow position: | chr11:9156287-9155971 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 96 |
Conread position: | 16-332 |
Cow position: | chr11:19063212-19062899 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 94 |
Conread position: | 17-317 |
Cow position: | chr11:49558814-49558530 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 219 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 248, 20 |
Conread position: | 17-322 |
Cow position: | chr11:4269540-4269235 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 93 |
Conread position: | 17-331 |
Cow position: | chr11:42311579-42311266 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 219 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 62, 70 |
Conread position: | 17-332 |
Cow position: | chr11:4026748-4026434 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 49 |
Conread position: | 17-332 |
Cow position: | chr11:44156388-44156084 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 94 |
Conread position: | 18-273 |
Cow position: | chr11:50042270-50042032 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 175 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 242, 55 |
Conread position: | 18-332 |
Cow position: | chr11:67451357-67451670 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 35 |
Conread position: | 19-295 |
Cow position: | chr11:74424459-74424733 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 92 |
Conread position: | 19-331 |
Cow position: | chr11:28391832-28392137 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 87 |
Conread position: | 20-317 |
Cow position: | chr11:26074103-26073806 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 93 |
Conread position: | 22-282 |
Cow position: | chr11:10216274-10216016 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 171 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 50, 65 |
Conread position: | 25-313 |
Cow position: | chr11:18070068-18069790 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 201 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 163, 66 |
Conread position: | 25-322 |
Cow position: | chr11:19101617-19101327 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 25-332 |
Cow position: | chr11:81851843-81851561 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 216 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 55, 26 |
Conread position: | 33-330 |
Cow position: | chr11:54216381-54216084 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 78 |
Conread position: | 34-331 |
Cow position: | chr11:26784138-26784431 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 78 |
Conread position: | 35-322 |
Cow position: | chr11:21928306-21928028 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 213 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 194, 76 |
Conread position: | 37-332 |
Cow position: | chr11:27657327-27657605 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 216 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 151, 74 |
Conread position: | 38-237 |
Cow position: | chr11:4034463-4034267 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 147 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 184, 61 |
Conread position: | 80-332 |
Cow position: | chr11:25865911-25865664 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 184 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 109, 30 |
Show alignments to all cow chromosomes.