Cow genome map
| Conread name: | OvF1-UMC-pd12fol-013-f01 |
| Conread position: | 1-322 |
| Cow position: | chr12:8676966-8676645 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 151 |
| Conread position: | 1-324 |
| Cow position: | chr12:600231-599916 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 55 |
| Conread position: | 1-332 |
| Cow position: | chr12:1776835-1776495 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 2-330 |
| Cow position: | chr12:35345684-35345996 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 2-332 |
| Cow position: | chr12:6405506-6405171 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 2-332 |
| Cow position: | chr12:20843752-20844060 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 317, 9 |
| Conread position: | 3-258 |
| Cow position: | chr12:11580948-11581193 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 3-317 |
| Cow position: | chr12:32654681-32655003 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 112 |
| Conread position: | 3-322 |
| Cow position: | chr12:1403627-1403955 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 161 |
| Conread position: | 3-332 |
| Cow position: | chr12:11099357-11099691 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 108 |
| Conread position: | 3-332 |
| Cow position: | chr12:20996947-20996621 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 90 |
| Conread position: | 3-332 |
| Cow position: | chr12:25099938-25099604 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 107 |
| Conread position: | 3-332 |
| Cow position: | chr12:27854829-27854500 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 3-332 |
| Cow position: | chr12:27931769-27931449 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 108 |
| Conread position: | 6-217 |
| Cow position: | chr12:32064229-32064436 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 185, 107 |
| Conread position: | 6-320 |
| Cow position: | chr12:23161790-23161464 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 111, 5 |
| Conread position: | 6-322 |
| Cow position: | chr12:21199120-21199441 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 113 |
| Conread position: | 10-329 |
| Cow position: | chr12:18993517-18993198 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 183, 97 |
| Conread position: | 10-332 |
| Cow position: | chr12:42858395-42858071 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 101 |
| Conread position: | 11-274 |
| Cow position: | chr12:21387100-21386838 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-296 |
| Cow position: | chr12:22570681-22570403 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 178, 106 |
| Conread position: | 11-300 |
| Cow position: | chr12:25262323-25262015 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 11-319 |
| Cow position: | chr12:24977674-24977378 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 11-323 |
| Cow position: | chr12:23141050-23140734 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 99 |
| Conread position: | 11-332 |
| Cow position: | chr12:3362082-3362406 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 100 |
| Conread position: | 11-332 |
| Cow position: | chr12:31202346-31202028 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-332 |
| Cow position: | chr12:42607123-42606783 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 14-331 |
| Cow position: | chr12:28005050-28005345 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 15-180 |
| Cow position: | chr12:35313251-35313089 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 16-255 |
| Cow position: | chr12:21253465-21253230 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 173, 94 |
| Conread position: | 16-310 |
| Cow position: | chr12:14695163-14695447 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 95 |
| Conread position: | 16-322 |
| Cow position: | chr12:21942887-21943188 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 16-332 |
| Cow position: | chr12:48471731-48471419 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 77 |
| Conread position: | 17-332 |
| Cow position: | chr12:37560157-37560473 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 21-329 |
| Cow position: | chr12:21482281-21482577 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 179, 21 |
| Conread position: | 34-332 |
| Cow position: | chr12:14661184-14660890 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 77 |
Show alignments to all cow chromosomes.