Cow genome map

Conread name: OvF1-UMC-pd12fol-013-f01

Conread position: 1-256
Cow position: chr13:30304204-30304461 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 70, 114

Conread position: 1-322
Cow position: chr13:34342819-34343139 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 18

Conread position: 1-324
Cow position: chr13:5625073-5624760 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 110

Conread position: 1-332
Cow position: chr13:15923468-15923134 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 110

Conread position: 2-271
Cow position: chr13:44652903-44652647 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 111

Conread position: 2-322
Cow position: chr13:31611395-31611075 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 105

Conread position: 2-326
Cow position: chr13:43982188-43981846 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 115, 295

Conread position: 2-331
Cow position: chr13:50110369-50110697 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 11

Conread position: 2-332
Cow position: chr13:31729978-31729647 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 11

Conread position: 2-332
Cow position: chr13:34041421-34041089 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 11

Conread position: 2-332
Cow position: chr13:48358556-48358873 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 109

Conread position: 3-312
Cow position: chr13:47229084-47228775 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 107

Conread position: 3-321
Cow position: chr13:29517915-29518226 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 204
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 311, 68

Conread position: 3-321
Cow position: chr13:31555826-31555524 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 81, 113

Conread position: 3-322
Cow position: chr13:23002092-23001780 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 91

Conread position: 3-322
Cow position: chr13:32546306-32546625 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 107

Conread position: 3-322
Cow position: chr13:57024610-57024917 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 185, 12

Conread position: 3-331
Cow position: chr13:3653403-3653069 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 108

Conread position: 3-332
Cow position: chr13:4484711-4485037 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 63

Conread position: 3-332
Cow position: chr13:4942299-4942630 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 108

Conread position: 3-332
Cow position: chr13:9045682-9046001 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-332
Cow position: chr13:13900784-13901112 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 88

Conread position: 3-332
Cow position: chr13:15543457-15543785 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-332
Cow position: chr13:35758199-35758530 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 45

Conread position: 10-332
Cow position: chr13:6667209-6666894 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 101

Conread position: 11-222
Cow position: chr13:15450196-15449990 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 178, 107

Conread position: 11-322
Cow position: chr13:678673-678984 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-330
Cow position: chr13:17998481-17998800 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr13:2387884-2387560 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 87, 91

Conread position: 11-332
Cow position: chr13:5627907-5627604 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 11-332
Cow position: chr13:21697176-21697504 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 99

Conread position: 11-332
Cow position: chr13:21839270-21838953 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 102

Conread position: 11-332
Cow position: chr13:28860087-28860409 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr13:31732965-31732649 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 32

Conread position: 11-332
Cow position: chr13:49974588-49974911 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 15-330
Cow position: chr13:11797791-11797478 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 102

Conread position: 16-254
Cow position: chr13:26845215-26845454 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 116, 95

Conread position: 16-313
Cow position: chr13:28670287-28670011 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 76

Conread position: 16-322
Cow position: chr13:42202310-42202013 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 246, 53

Conread position: 16-330
Cow position: chr13:30239246-30239555 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 97

Conread position: 16-332
Cow position: chr13:13325857-13326172 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 94

Conread position: 16-332
Cow position: chr13:34938380-34938686 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 59

Conread position: 17-316
Cow position: chr13:32924194-32923906 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 223
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 206, 82

Conread position: 17-318
Cow position: chr13:34324625-34324347 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 277, 90

Conread position: 17-332
Cow position: chr13:14402167-14401863 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 94

Conread position: 18-332
Cow position: chr13:31507846-31508155 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 93

Conread position: 25-321
Cow position: chr13:22184406-22184117 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 127, 60

Conread position: 25-321
Cow position: chr13:34909085-34908806 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 86

Conread position: 26-280
Cow position: chr13:31506555-31506811 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 88

Conread position: 26-300
Cow position: chr13:6148162-6148431 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 76

Conread position: 29-331
Cow position: chr13:14177901-14177610 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 82, 0

Conread position: 39-332
Cow position: chr13:6358074-6358369 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 71

Conread position: 44-322
Cow position: chr13:15519564-15519293 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 67

Conread position: 66-332
Cow position: chr13:5501021-5500754 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 123, 44

Show alignments to all cow chromosomes.