Cow genome map
Conread name: | OvF1-UMC-pd12fol-013-f01 |
Conread position: | 1-256 |
Cow position: | chr13:30304204-30304461 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 186 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 70, 114 |
Conread position: | 1-322 |
Cow position: | chr13:34342819-34343139 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 18 |
Conread position: | 1-324 |
Cow position: | chr13:5625073-5624760 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 189, 110 |
Conread position: | 1-332 |
Cow position: | chr13:15923468-15923134 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 110 |
Conread position: | 2-271 |
Cow position: | chr13:44652903-44652647 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 190 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 89, 111 |
Conread position: | 2-322 |
Cow position: | chr13:31611395-31611075 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 105 |
Conread position: | 2-326 |
Cow position: | chr13:43982188-43981846 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 239 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 115, 295 |
Conread position: | 2-331 |
Cow position: | chr13:50110369-50110697 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 11 |
Conread position: | 2-332 |
Cow position: | chr13:31729978-31729647 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 11 |
Conread position: | 2-332 |
Cow position: | chr13:34041421-34041089 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 11 |
Conread position: | 2-332 |
Cow position: | chr13:48358556-48358873 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 109 |
Conread position: | 3-312 |
Cow position: | chr13:47229084-47228775 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 107 |
Conread position: | 3-321 |
Cow position: | chr13:29517915-29518226 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 204 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 311, 68 |
Conread position: | 3-321 |
Cow position: | chr13:31555826-31555524 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 215 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 81, 113 |
Conread position: | 3-322 |
Cow position: | chr13:23002092-23001780 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 91 |
Conread position: | 3-322 |
Cow position: | chr13:32546306-32546625 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 107 |
Conread position: | 3-322 |
Cow position: | chr13:57024610-57024917 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 228 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 185, 12 |
Conread position: | 3-331 |
Cow position: | chr13:3653403-3653069 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 108 |
Conread position: | 3-332 |
Cow position: | chr13:4484711-4485037 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 63 |
Conread position: | 3-332 |
Cow position: | chr13:4942299-4942630 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 108 |
Conread position: | 3-332 |
Cow position: | chr13:9045682-9046001 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 3-332 |
Cow position: | chr13:13900784-13901112 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 88 |
Conread position: | 3-332 |
Cow position: | chr13:15543457-15543785 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 3-332 |
Cow position: | chr13:35758199-35758530 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 45 |
Conread position: | 10-332 |
Cow position: | chr13:6667209-6666894 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 101 |
Conread position: | 11-222 |
Cow position: | chr13:15450196-15449990 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 157 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 178, 107 |
Conread position: | 11-322 |
Cow position: | chr13:678673-678984 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-330 |
Cow position: | chr13:17998481-17998800 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr13:2387884-2387560 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 232 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 87, 91 |
Conread position: | 11-332 |
Cow position: | chr13:5627907-5627604 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 220 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 11-332 |
Cow position: | chr13:21697176-21697504 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 99 |
Conread position: | 11-332 |
Cow position: | chr13:21839270-21838953 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 102 |
Conread position: | 11-332 |
Cow position: | chr13:28860087-28860409 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr13:31732965-31732649 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 32 |
Conread position: | 11-332 |
Cow position: | chr13:49974588-49974911 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 15-330 |
Cow position: | chr13:11797791-11797478 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 102 |
Conread position: | 16-254 |
Cow position: | chr13:26845215-26845454 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 177 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 116, 95 |
Conread position: | 16-313 |
Cow position: | chr13:28670287-28670011 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 210 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 29, 76 |
Conread position: | 16-322 |
Cow position: | chr13:42202310-42202013 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 206 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 246, 53 |
Conread position: | 16-330 |
Cow position: | chr13:30239246-30239555 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 97 |
Conread position: | 16-332 |
Cow position: | chr13:13325857-13326172 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 94 |
Conread position: | 16-332 |
Cow position: | chr13:34938380-34938686 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 59 |
Conread position: | 17-316 |
Cow position: | chr13:32924194-32923906 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 223 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 206, 82 |
Conread position: | 17-318 |
Cow position: | chr13:34324625-34324347 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 214 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 277, 90 |
Conread position: | 17-332 |
Cow position: | chr13:14402167-14401863 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 94 |
Conread position: | 18-332 |
Cow position: | chr13:31507846-31508155 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 93 |
Conread position: | 25-321 |
Cow position: | chr13:22184406-22184117 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 201 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 127, 60 |
Conread position: | 25-321 |
Cow position: | chr13:34909085-34908806 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 86 |
Conread position: | 26-280 |
Cow position: | chr13:31506555-31506811 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 186 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 48, 88 |
Conread position: | 26-300 |
Cow position: | chr13:6148162-6148431 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 191 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 87, 76 |
Conread position: | 29-331 |
Cow position: | chr13:14177901-14177610 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 218 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 39-332 |
Cow position: | chr13:6358074-6358369 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 71 |
Conread position: | 44-322 |
Cow position: | chr13:15519564-15519293 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 67 |
Conread position: | 66-332 |
Cow position: | chr13:5501021-5500754 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 193 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 123, 44 |
Show alignments to all cow chromosomes.