Cow genome map
Conread name: | OvF1-UMC-pd12fol-013-f01 |
Conread position: | 1-241 |
Cow position: | chr14:12899884-12900123 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 181 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 10, 111 |
Conread position: | 1-332 |
Cow position: | chr14:16272506-16272175 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 110 |
Conread position: | 1-332 |
Cow position: | chr14:20783241-20783588 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 166 |
Conread position: | 1-332 |
Cow position: | chr14:29046896-29046557 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 109 |
Conread position: | 1-332 |
Cow position: | chr14:35385025-35384709 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 90 |
Conread position: | 2-319 |
Cow position: | chr14:19327470-19327157 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 2-329 |
Cow position: | chr14:16918926-16918602 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 3-184 |
Cow position: | chr14:32447582-32447755 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 3-244 |
Cow position: | chr14:37224982-37225223 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 182 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 156, 108 |
Conread position: | 3-256 |
Cow position: | chr14:12742277-12742029 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 188 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 3-320 |
Cow position: | chr14:30595578-30595248 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 3-321 |
Cow position: | chr14:48402359-48402056 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 226 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 81, 108 |
Conread position: | 3-332 |
Cow position: | chr14:13863305-13862976 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 3-332 |
Cow position: | chr14:17000267-16999937 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 90 |
Conread position: | 3-332 |
Cow position: | chr14:22030654-22030329 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 107 |
Conread position: | 3-332 |
Cow position: | chr14:45081845-45082170 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 3-332 |
Cow position: | chr14:46391740-46391420 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 108 |
Conread position: | 3-332 |
Cow position: | chr14:50111585-50111919 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 108 |
Conread position: | 6-255 |
Cow position: | chr14:10520705-10520461 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 173 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 182, 104 |
Conread position: | 6-331 |
Cow position: | chr14:38147799-38148112 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 25 |
Conread position: | 8-271 |
Cow position: | chr14:46637347-46637604 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 196 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 181, 91 |
Conread position: | 8-277 |
Cow position: | chr14:21744896-21745161 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 188 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 180, 103 |
Conread position: | 8-332 |
Cow position: | chr14:13779744-13780072 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 67 |
Conread position: | 8-332 |
Cow position: | chr14:44775242-44774927 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 53 |
Conread position: | 10-332 |
Cow position: | chr14:48253516-48253197 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 97 |
Conread position: | 11-219 |
Cow position: | chr14:33392999-33392792 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 148 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-274 |
Cow position: | chr14:17490660-17490398 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 99 |
Conread position: | 11-332 |
Cow position: | chr14:751364-751682 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr14:5529860-5530178 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 97 |
Conread position: | 11-332 |
Cow position: | chr14:9046375-9046695 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 100 |
Conread position: | 11-332 |
Cow position: | chr14:10147672-10147990 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr14:12124385-12124067 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr14:15275051-15274718 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 102 |
Conread position: | 11-332 |
Cow position: | chr14:17760081-17759771 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 308, 99 |
Conread position: | 11-332 |
Cow position: | chr14:27978159-27978471 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr14:45671248-45670920 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 99 |
Conread position: | 11-332 |
Cow position: | chr14:45710925-45710608 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 104 |
Conread position: | 15-317 |
Cow position: | chr14:33677872-33678166 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 27 |
Conread position: | 15-329 |
Cow position: | chr14:44227178-44227494 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 100 |
Conread position: | 15-331 |
Cow position: | chr14:40168929-40168620 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 94 |
Conread position: | 15-331 |
Cow position: | chr14:46466486-46466783 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 230 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 171, 98 |
Conread position: | 15-332 |
Cow position: | chr14:12611233-12611532 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 232 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 169, 58 |
Conread position: | 16-322 |
Cow position: | chr14:48601531-48601236 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 20 |
Conread position: | 16-324 |
Cow position: | chr14:23256551-23256254 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 223 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 16-331 |
Cow position: | chr14:40341861-40342180 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 59 |
Conread position: | 16-331 |
Cow position: | chr14:43559039-43559356 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 95 |
Conread position: | 16-332 |
Cow position: | chr14:11153348-11153032 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 99 |
Conread position: | 16-332 |
Cow position: | chr14:29775277-29774974 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 100 |
Conread position: | 16-332 |
Cow position: | chr14:50139367-50139681 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 97 |
Conread position: | 17-277 |
Cow position: | chr14:30661255-30661008 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 179 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 77, 95 |
Conread position: | 17-317 |
Cow position: | chr14:13274414-13274704 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 96 |
Conread position: | 17-318 |
Cow position: | chr14:44552657-44552942 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 58 |
Conread position: | 17-319 |
Cow position: | chr14:38814676-38814381 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 212 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 171, 43 |
Conread position: | 17-322 |
Cow position: | chr14:5513742-5514039 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 94 |
Conread position: | 17-330 |
Cow position: | chr14:2951755-2951456 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 215 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 165, 97 |
Conread position: | 17-332 |
Cow position: | chr14:9514482-9514178 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 222 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 297, 93 |
Conread position: | 17-332 |
Cow position: | chr14:13303764-13304073 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 16 |
Conread position: | 17-332 |
Cow position: | chr14:17687309-17687617 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 54 |
Conread position: | 17-332 |
Cow position: | chr14:48826091-48826398 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 98 |
Conread position: | 18-300 |
Cow position: | chr14:13462325-13462607 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 93 |
Conread position: | 18-302 |
Cow position: | chr14:45086047-45086328 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 93 |
Conread position: | 18-314 |
Cow position: | chr14:44255951-44255659 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 93 |
Conread position: | 18-318 |
Cow position: | chr14:37455107-37454830 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 221 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 171, 85 |
Conread position: | 18-332 |
Cow position: | chr14:45678274-45677963 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 227 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 71, 96 |
Conread position: | 19-321 |
Cow position: | chr14:30735979-30736278 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 40 |
Conread position: | 19-327 |
Cow position: | chr14:30705507-30705192 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 225 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 124, 46 |
Conread position: | 19-329 |
Cow position: | chr14:30762072-30761764 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 216 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 163, 46 |
Conread position: | 20-332 |
Cow position: | chr14:44689878-44690191 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 91 |
Conread position: | 26-331 |
Cow position: | chr14:13579207-13579503 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 85 |
Conread position: | 31-322 |
Cow position: | chr14:190863-191153 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 80 |
Conread position: | 32-279 |
Cow position: | chr14:25692769-25693010 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 180 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 62, 83 |
Conread position: | 40-331 |
Cow position: | chr14:33240292-33240569 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 199 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 148, 54 |
Conread position: | 63-321 |
Cow position: | chr14:32447813-32448068 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 195 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 97, 48 |
Show alignments to all cow chromosomes.