Cow genome map
| Conread name: | OvF1-UMC-pd12fol-013-f01 |
| Conread position: | 1-323 |
| Cow position: | chr18:54170282-54169960 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 110 |
| Conread position: | 1-324 |
| Cow position: | chr18:23798875-23799197 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 106 |
| Conread position: | 1-332 |
| Cow position: | chr18:16175390-16175059 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 110 |
| Conread position: | 1-332 |
| Cow position: | chr18:28972659-28972328 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 110 |
| Conread position: | 2-292 |
| Cow position: | chr18:51614421-51614135 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 175, 49 |
| Conread position: | 2-331 |
| Cow position: | chr18:40479625-40479949 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 11 |
| Conread position: | 2-332 |
| Cow position: | chr18:14131625-14131949 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 3-317 |
| Cow position: | chr18:27837079-27836773 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 3-321 |
| Cow position: | chr18:15856452-15856761 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 3-322 |
| Cow position: | chr18:52652140-52652458 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 108 |
| Conread position: | 3-331 |
| Cow position: | chr18:47742733-47743059 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 107 |
| Conread position: | 3-332 |
| Cow position: | chr18:14417210-14417525 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 72 |
| Conread position: | 3-332 |
| Cow position: | chr18:29865380-29865052 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 108 |
| Conread position: | 3-332 |
| Cow position: | chr18:37507188-37507516 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 91 |
| Conread position: | 3-332 |
| Cow position: | chr18:41839582-41839251 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 72 |
| Conread position: | 6-277 |
| Cow position: | chr18:18842386-18842119 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 7 |
| Conread position: | 9-322 |
| Cow position: | chr18:51625068-51624765 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 181, 24 |
| Conread position: | 10-322 |
| Cow position: | chr18:16137612-16137307 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 174, 93 |
| Conread position: | 11-111 |
| Cow position: | chr18:33270181-33270281 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-320 |
| Cow position: | chr18:16079909-16080218 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 100 |
| Conread position: | 11-332 |
| Cow position: | chr18:19353599-19353920 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 108 |
| Conread position: | 15-253 |
| Cow position: | chr18:32768993-32769225 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 213, 98 |
| Conread position: | 15-320 |
| Cow position: | chr18:54022888-54022586 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 96 |
| Conread position: | 15-322 |
| Cow position: | chr18:29238139-29238441 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 88 |
| Conread position: | 15-331 |
| Cow position: | chr18:40345161-40344842 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 179, 79 |
| Conread position: | 16-322 |
| Cow position: | chr18:51461809-51461504 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 94 |
| Conread position: | 16-331 |
| Cow position: | chr18:38343049-38342735 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 95 |
| Conread position: | 17-322 |
| Cow position: | chr18:16392837-16392549 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 187, 26 |
| Conread position: | 17-324 |
| Cow position: | chr18:56013822-56014134 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 62, 144 |
| Conread position: | 17-328 |
| Cow position: | chr18:46867656-46867369 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 245, 82 |
| Conread position: | 17-330 |
| Cow position: | chr18:25352501-25352816 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 94 |
| Conread position: | 17-332 |
| Cow position: | chr18:11273872-11273562 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 93 |
| Conread position: | 17-332 |
| Cow position: | chr18:51482114-51482414 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 93 |
| Conread position: | 18-319 |
| Cow position: | chr18:19405329-19405035 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 172, 67 |
| Conread position: | 19-317 |
| Cow position: | chr18:54271728-54272019 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 25-321 |
| Cow position: | chr18:46876079-46875799 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 115, 88 |
| Conread position: | 48-332 |
| Cow position: | chr18:16089395-16089678 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 63 |
| Conread position: | 54-322 |
| Cow position: | chr18:36509895-36510163 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 59-332 |
| Cow position: | chr18:51694986-51695260 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 129, 51 |
Show alignments to all cow chromosomes.