Cow genome map
| Conread name: | OvF1-UMC-pd12fol-013-f01 |
| Conread position: | 1-332 |
| Cow position: | chr19:892393-892073 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 110 |
| Conread position: | 1-332 |
| Cow position: | chr19:3139165-3139504 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 189, 50 |
| Conread position: | 1-332 |
| Cow position: | chr19:12774344-12774667 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 93 |
| Conread position: | 1-332 |
| Cow position: | chr19:39667297-39666979 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 110 |
| Conread position: | 2-332 |
| Cow position: | chr19:33527347-33527672 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 3-188 |
| Cow position: | chr19:21339487-21339301 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 91 |
| Conread position: | 3-322 |
| Cow position: | chr19:173490-173808 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 108 |
| Conread position: | 3-324 |
| Cow position: | chr19:50723788-50724106 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 91 |
| Conread position: | 3-332 |
| Cow position: | chr19:438206-437876 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 110 |
| Conread position: | 3-332 |
| Cow position: | chr19:773835-774167 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 19 |
| Conread position: | 3-332 |
| Cow position: | chr19:4386848-4387173 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 3-332 |
| Cow position: | chr19:5730105-5730416 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 89 |
| Conread position: | 3-332 |
| Cow position: | chr19:5900276-5899951 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 13 |
| Conread position: | 3-332 |
| Cow position: | chr19:33874660-33874974 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 3-332 |
| Cow position: | chr19:40851215-40850897 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 108 |
| Conread position: | 3-332 |
| Cow position: | chr19:43144947-43145266 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 184, 107 |
| Conread position: | 5-328 |
| Cow position: | chr19:40886487-40886176 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 183, 95 |
| Conread position: | 7-332 |
| Cow position: | chr19:376483-376149 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 10-332 |
| Cow position: | chr19:7343309-7343632 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 100 |
| Conread position: | 11-317 |
| Cow position: | chr19:39541-39842 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 96 |
| Conread position: | 11-331 |
| Cow position: | chr19:5249497-5249171 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 175 |
| Conread position: | 11-332 |
| Cow position: | chr19:20105968-20106289 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 115 |
| Conread position: | 11-332 |
| Cow position: | chr19:52150443-52150119 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 15-217 |
| Cow position: | chr19:3174061-3174262 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 173, 96 |
| Conread position: | 15-269 |
| Cow position: | chr19:135545-135302 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 35, 97 |
| Conread position: | 15-311 |
| Cow position: | chr19:1587991-1587703 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 102 |
| Conread position: | 15-317 |
| Cow position: | chr19:9706915-9706630 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 121, 45 |
| Conread position: | 15-320 |
| Cow position: | chr19:256509-256812 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 95 |
| Conread position: | 15-320 |
| Cow position: | chr19:28405455-28405161 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 56 |
| Conread position: | 15-320 |
| Cow position: | chr19:33653480-33653185 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 112 |
| Conread position: | 15-332 |
| Cow position: | chr19:40816266-40815950 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 96 |
| Conread position: | 16-323 |
| Cow position: | chr19:1489754-1489444 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 17-332 |
| Cow position: | chr19:6713480-6713179 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 141, 94 |
| Conread position: | 17-332 |
| Cow position: | chr19:28580414-28580112 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 17-332 |
| Cow position: | chr19:39184293-39183982 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 94 |
| Conread position: | 18-243 |
| Cow position: | chr19:48860963-48860738 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 124, 95 |
| Conread position: | 18-321 |
| Cow position: | chr19:28594798-28595085 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 171, 33 |
| Conread position: | 18-331 |
| Cow position: | chr19:35384363-35384055 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 155, 73 |
| Conread position: | 19-322 |
| Cow position: | chr19:7489602-7489903 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 32 |
| Conread position: | 28-332 |
| Cow position: | chr19:205763-206070 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 56-322 |
| Cow position: | chr19:33942857-33943118 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 55 |
| Conread position: | 79-283 |
| Cow position: | chr19:264959-265153 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 32 |
Show alignments to all cow chromosomes.