Cow genome map
| Conread name: | OvF1-UMC-pd12fol-013-f01 |
| Conread position: | 1-332 |
| Cow position: | chr20:13764093-13764419 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 2-232 |
| Cow position: | chr20:35125689-35125917 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 2-290 |
| Cow position: | chr20:5229321-5229039 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 74 |
| Conread position: | 2-317 |
| Cow position: | chr20:22210238-22210541 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 2-322 |
| Cow position: | chr20:13499305-13499621 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 97, 112 |
| Conread position: | 2-322 |
| Cow position: | chr20:15293185-15293494 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 11 |
| Conread position: | 2-322 |
| Cow position: | chr20:28162008-28162337 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 156 |
| Conread position: | 2-324 |
| Cow position: | chr20:25849626-25849307 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 2-332 |
| Cow position: | chr20:12569717-12570027 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 11 |
| Conread position: | 3-332 |
| Cow position: | chr20:17660548-17660218 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 108 |
| Conread position: | 3-332 |
| Cow position: | chr20:19439109-19439440 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 107 |
| Conread position: | 3-332 |
| Cow position: | chr20:21915825-21916161 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 109 |
| Conread position: | 3-332 |
| Cow position: | chr20:23468468-23468142 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 110 |
| Conread position: | 3-332 |
| Cow position: | chr20:27870398-27870732 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 110 |
| Conread position: | 8-320 |
| Cow position: | chr20:10854139-10853833 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 149, 105 |
| Conread position: | 10-332 |
| Cow position: | chr20:23800086-23800408 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 61 |
| Conread position: | 11-290 |
| Cow position: | chr20:13678844-13678566 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 100 |
| Conread position: | 11-322 |
| Cow position: | chr20:823974-824279 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 14 |
| Conread position: | 11-331 |
| Cow position: | chr20:871805-871484 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 100 |
| Conread position: | 11-331 |
| Cow position: | chr20:18967702-18968014 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 223, 19 |
| Conread position: | 11-332 |
| Cow position: | chr20:19355969-19356288 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 11-332 |
| Cow position: | chr20:30429472-30429790 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 12-331 |
| Cow position: | chr20:27896824-27896524 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 174, 99 |
| Conread position: | 15-253 |
| Cow position: | chr20:8216719-8216956 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 174, 88 |
| Conread position: | 15-292 |
| Cow position: | chr20:13663848-13663567 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 100 |
| Conread position: | 15-297 |
| Cow position: | chr20:14869751-14869479 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 173, 96 |
| Conread position: | 15-317 |
| Cow position: | chr20:9344174-9344461 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 76, 97 |
| Conread position: | 16-280 |
| Cow position: | chr20:5791546-5791794 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 101, 128 |
| Conread position: | 17-271 |
| Cow position: | chr20:32349476-32349724 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 171, 68 |
| Conread position: | 17-290 |
| Cow position: | chr20:15066678-15066945 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 13 |
| Conread position: | 17-321 |
| Cow position: | chr20:30686781-30687087 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 94 |
| Conread position: | 18-317 |
| Cow position: | chr20:28564373-28564087 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 75 |
| Conread position: | 18-321 |
| Cow position: | chr20:9546878-9547158 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 18-332 |
| Cow position: | chr20:5536146-5536468 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 93 |
| Conread position: | 19-332 |
| Cow position: | chr20:9520928-9520612 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 93 |
| Conread position: | 19-332 |
| Cow position: | chr20:16178557-16178240 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 92 |
| Conread position: | 29-331 |
| Cow position: | chr20:20753572-20753281 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 284, 84 |
| Conread position: | 30-332 |
| Cow position: | chr20:15096668-15096370 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 41 |
| Conread position: | 30-332 |
| Cow position: | chr20:19340861-19341155 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 43 |
| Conread position: | 33-316 |
| Cow position: | chr20:32120559-32120838 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 38 |
| Conread position: | 44-292 |
| Cow position: | chr20:24615656-24615411 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 63 |
| Conread position: | 56-332 |
| Cow position: | chr20:27338446-27338724 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 54 |
| Conread position: | 72-270 |
| Cow position: | chr20:33182877-33182681 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 8, 40 |
Show alignments to all cow chromosomes.