Cow genome map
| Conread name: | OvF1-UMC-pd12fol-013-f01 |
| Conread position: | 1-303 |
| Cow position: | chr23:14963916-14963621 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 44 |
| Conread position: | 1-310 |
| Cow position: | chr23:38581847-38582128 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 179, 87 |
| Conread position: | 1-332 |
| Cow position: | chr23:1022825-1022496 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 25 |
| Conread position: | 1-332 |
| Cow position: | chr23:2025950-2025619 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 1-332 |
| Cow position: | chr23:2794125-2793797 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 110 |
| Conread position: | 2-233 |
| Cow position: | chr23:1957021-1957241 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 2-317 |
| Cow position: | chr23:27400658-27400966 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 2-332 |
| Cow position: | chr23:15526703-15527038 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 11 |
| Conread position: | 3-283 |
| Cow position: | chr23:15041630-15041367 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 268, 91 |
| Conread position: | 3-322 |
| Cow position: | chr23:19490678-19491000 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 108 |
| Conread position: | 3-324 |
| Cow position: | chr23:28218553-28218875 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 3-330 |
| Cow position: | chr23:37716637-37716961 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 179, 108 |
| Conread position: | 3-332 |
| Cow position: | chr23:3879950-3879626 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 108 |
| Conread position: | 3-332 |
| Cow position: | chr23:19949456-19949125 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 107 |
| Conread position: | 3-332 |
| Cow position: | chr23:20155078-20154766 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 80 |
| Conread position: | 3-332 |
| Cow position: | chr23:36030242-36029919 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 43 |
| Conread position: | 8-332 |
| Cow position: | chr23:2759030-2759359 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 103 |
| Conread position: | 9-332 |
| Cow position: | chr23:11714730-11714405 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 101 |
| Conread position: | 10-188 |
| Cow position: | chr23:4361166-4361340 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 10-292 |
| Cow position: | chr23:14972833-14972551 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 101 |
| Conread position: | 10-319 |
| Cow position: | chr23:15178216-15178518 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 35 |
| Conread position: | 10-332 |
| Cow position: | chr23:3707267-3707582 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 101 |
| Conread position: | 10-332 |
| Cow position: | chr23:4889828-4890147 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 101 |
| Conread position: | 11-290 |
| Cow position: | chr23:14923156-14922878 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-317 |
| Cow position: | chr23:14777816-14777520 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 158, 102 |
| Conread position: | 11-330 |
| Cow position: | chr23:618327-618015 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 11-332 |
| Cow position: | chr23:41142087-41141771 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 42 |
| Conread position: | 15-316 |
| Cow position: | chr23:23282374-23282662 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 96 |
| Conread position: | 15-322 |
| Cow position: | chr23:31648875-31648579 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 98 |
| Conread position: | 15-323 |
| Cow position: | chr23:29451205-29450900 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 97 |
| Conread position: | 15-329 |
| Cow position: | chr23:25682808-25682525 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 297, 102 |
| Conread position: | 15-332 |
| Cow position: | chr23:5873429-5873111 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 12 |
| Conread position: | 15-332 |
| Cow position: | chr23:16054925-16055234 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 89 |
| Conread position: | 16-330 |
| Cow position: | chr23:15876421-15876106 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 168, 77 |
| Conread position: | 16-331 |
| Cow position: | chr23:16498092-16497784 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 94 |
| Conread position: | 16-332 |
| Cow position: | chr23:22146163-22145850 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 96 |
| Conread position: | 17-291 |
| Cow position: | chr23:30237417-30237690 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 142, 94 |
| Conread position: | 17-317 |
| Cow position: | chr23:2718460-2718756 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 42 |
| Conread position: | 17-323 |
| Cow position: | chr23:13510770-13511066 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 77, 99 |
| Conread position: | 17-331 |
| Cow position: | chr23:11077034-11076724 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 82 |
| Conread position: | 17-332 |
| Cow position: | chr23:4818171-4818483 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 94 |
| Conread position: | 18-277 |
| Cow position: | chr23:19451297-19451550 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 18-317 |
| Cow position: | chr23:2576563-2576852 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 171, 75 |
| Conread position: | 19-332 |
| Cow position: | chr23:4513619-4513944 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 25-283 |
| Cow position: | chr23:16614019-16613764 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 165, 59 |
| Conread position: | 30-322 |
| Cow position: | chr23:965336-965046 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 80 |
| Conread position: | 30-322 |
| Cow position: | chr23:11779942-11780231 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 81 |
| Conread position: | 48-332 |
| Cow position: | chr23:38691668-38691947 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 79-332 |
| Cow position: | chr23:7314116-7314366 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 31 |
Show alignments to all cow chromosomes.