Cow genome map
Conread name: | OvF1-UMC-pd12fol-013-f01 |
Conread position: | 1-322 |
Cow position: | chr24:14871101-14870791 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 231 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 187, 10 |
Conread position: | 1-327 |
Cow position: | chr24:13301589-13301260 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 226 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 116, 135 |
Conread position: | 1-332 |
Cow position: | chr24:6407253-6407583 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 114 |
Conread position: | 1-332 |
Cow position: | chr24:38585901-38585572 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 110 |
Conread position: | 2-322 |
Cow position: | chr24:5888030-5887717 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 217 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 73, 66 |
Conread position: | 2-329 |
Cow position: | chr24:19834618-19834950 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 11 |
Conread position: | 2-332 |
Cow position: | chr24:9090830-9090501 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 11 |
Conread position: | 2-332 |
Cow position: | chr24:9187523-9187196 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 2-332 |
Cow position: | chr24:13233477-13233809 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 2-332 |
Cow position: | chr24:19702717-19703040 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 3-187 |
Cow position: | chr24:30430835-30431015 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 133 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 3-228 |
Cow position: | chr24:22972313-22972527 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 167 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 118, 110 |
Conread position: | 3-262 |
Cow position: | chr24:34493961-34493709 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 180 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 81, 112 |
Conread position: | 3-322 |
Cow position: | chr24:16561104-16560775 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 3-323 |
Cow position: | chr24:29188513-29188828 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 3-330 |
Cow position: | chr24:6659276-6658956 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 230 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 186, 73 |
Conread position: | 3-331 |
Cow position: | chr24:17321934-17322241 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 231 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 60, 50 |
Conread position: | 3-332 |
Cow position: | chr24:4414313-4413996 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 3-332 |
Cow position: | chr24:6023885-6023537 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 3-332 |
Cow position: | chr24:6130047-6130362 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 239 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 186, 103 |
Conread position: | 3-332 |
Cow position: | chr24:11152017-11151686 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 107 |
Conread position: | 3-332 |
Cow position: | chr24:12334536-12334180 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 251 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 174, 108 |
Conread position: | 6-277 |
Cow position: | chr24:6060421-6060685 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 187 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 183, 16 |
Conread position: | 10-332 |
Cow position: | chr24:14383406-14383077 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 101 |
Conread position: | 11-317 |
Cow position: | chr24:13189415-13189712 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 222 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 179, 96 |
Conread position: | 11-321 |
Cow position: | chr24:12238520-12238821 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 82 |
Conread position: | 11-323 |
Cow position: | chr24:35869332-35869031 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 106 |
Conread position: | 11-332 |
Cow position: | chr24:5991997-5991675 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 99 |
Conread position: | 11-332 |
Cow position: | chr24:6337617-6337933 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 100 |
Conread position: | 11-332 |
Cow position: | chr24:7062770-7063088 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr24:12699589-12699278 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 229 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 178, 77 |
Conread position: | 11-332 |
Cow position: | chr24:23504634-23504314 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 95 |
Conread position: | 11-332 |
Cow position: | chr24:29305085-29304767 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr24:44018736-44019054 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 12-331 |
Cow position: | chr24:17300672-17300371 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 227 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 301, 87 |
Conread position: | 15-327 |
Cow position: | chr24:12163177-12163482 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 92 |
Conread position: | 15-331 |
Cow position: | chr24:6353377-6353687 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 228 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 173, 55 |
Conread position: | 16-282 |
Cow position: | chr24:19640914-19641182 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 199 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 152, 32 |
Conread position: | 16-330 |
Cow position: | chr24:37320358-37320067 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 216 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 191, 95 |
Conread position: | 16-332 |
Cow position: | chr24:6435716-6436034 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 94 |
Conread position: | 17-208 |
Cow position: | chr24:17695745-17695554 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 138 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 138, 94 |
Conread position: | 17-274 |
Cow position: | chr24:36558531-36558289 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 17-332 |
Cow position: | chr24:147375-147061 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 95 |
Conread position: | 17-332 |
Cow position: | chr24:6142321-6142621 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 26 |
Conread position: | 17-332 |
Cow position: | chr24:12087443-12087750 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 96 |
Conread position: | 17-332 |
Cow position: | chr24:14389299-14388988 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 94 |
Conread position: | 18-317 |
Cow position: | chr24:36709816-36710101 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 215 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 50, 103 |
Conread position: | 18-330 |
Cow position: | chr24:9435704-9435390 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 212 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 53, 97 |
Conread position: | 18-332 |
Cow position: | chr24:38638770-38639072 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 100 |
Conread position: | 30-319 |
Cow position: | chr24:16097774-16098061 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 203 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 156, 81 |
Conread position: | 44-332 |
Cow position: | chr24:9545316-9545605 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 67 |
Conread position: | 50-330 |
Cow position: | chr24:12205063-12204796 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 209 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 139, 9 |
Conread position: | 52-332 |
Cow position: | chr24:25437564-25437834 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 267, 59 |
Show alignments to all cow chromosomes.