Cow genome map

Conread name: OvF1-UMC-pd12fol-013-f01

Conread position: 1-322
Cow position: chr24:14871101-14870791 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 187, 10

Conread position: 1-327
Cow position: chr24:13301589-13301260 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 116, 135

Conread position: 1-332
Cow position: chr24:6407253-6407583 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 114

Conread position: 1-332
Cow position: chr24:38585901-38585572 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 110

Conread position: 2-322
Cow position: chr24:5888030-5887717 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 73, 66

Conread position: 2-329
Cow position: chr24:19834618-19834950 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 11

Conread position: 2-332
Cow position: chr24:9090830-9090501 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 11

Conread position: 2-332
Cow position: chr24:9187523-9187196 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 108

Conread position: 2-332
Cow position: chr24:13233477-13233809 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 2-332
Cow position: chr24:19702717-19703040 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 3-187
Cow position: chr24:30430835-30431015 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 3-228
Cow position: chr24:22972313-22972527 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 118, 110

Conread position: 3-262
Cow position: chr24:34493961-34493709 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 180
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 112

Conread position: 3-322
Cow position: chr24:16561104-16560775 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 3-323
Cow position: chr24:29188513-29188828 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-330
Cow position: chr24:6659276-6658956 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 186, 73

Conread position: 3-331
Cow position: chr24:17321934-17322241 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 50

Conread position: 3-332
Cow position: chr24:4414313-4413996 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-332
Cow position: chr24:6023885-6023537 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 3-332
Cow position: chr24:6130047-6130362 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 186, 103

Conread position: 3-332
Cow position: chr24:11152017-11151686 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 107

Conread position: 3-332
Cow position: chr24:12334536-12334180 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 251
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 174, 108

Conread position: 6-277
Cow position: chr24:6060421-6060685 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 183, 16

Conread position: 10-332
Cow position: chr24:14383406-14383077 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 101

Conread position: 11-317
Cow position: chr24:13189415-13189712 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 179, 96

Conread position: 11-321
Cow position: chr24:12238520-12238821 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 82

Conread position: 11-323
Cow position: chr24:35869332-35869031 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 106

Conread position: 11-332
Cow position: chr24:5991997-5991675 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 99

Conread position: 11-332
Cow position: chr24:6337617-6337933 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 100

Conread position: 11-332
Cow position: chr24:7062770-7063088 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr24:12699589-12699278 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 178, 77

Conread position: 11-332
Cow position: chr24:23504634-23504314 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 95

Conread position: 11-332
Cow position: chr24:29305085-29304767 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr24:44018736-44019054 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 12-331
Cow position: chr24:17300672-17300371 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 227
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 301, 87

Conread position: 15-327
Cow position: chr24:12163177-12163482 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 92

Conread position: 15-331
Cow position: chr24:6353377-6353687 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 173, 55

Conread position: 16-282
Cow position: chr24:19640914-19641182 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 152, 32

Conread position: 16-330
Cow position: chr24:37320358-37320067 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 191, 95

Conread position: 16-332
Cow position: chr24:6435716-6436034 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 94

Conread position: 17-208
Cow position: chr24:17695745-17695554 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 94

Conread position: 17-274
Cow position: chr24:36558531-36558289 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 17-332
Cow position: chr24:147375-147061 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 95

Conread position: 17-332
Cow position: chr24:6142321-6142621 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 26

Conread position: 17-332
Cow position: chr24:12087443-12087750 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 96

Conread position: 17-332
Cow position: chr24:14389299-14388988 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 94

Conread position: 18-317
Cow position: chr24:36709816-36710101 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 50, 103

Conread position: 18-330
Cow position: chr24:9435704-9435390 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 53, 97

Conread position: 18-332
Cow position: chr24:38638770-38639072 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 100

Conread position: 30-319
Cow position: chr24:16097774-16098061 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 156, 81

Conread position: 44-332
Cow position: chr24:9545316-9545605 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 67

Conread position: 50-330
Cow position: chr24:12205063-12204796 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 209
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 139, 9

Conread position: 52-332
Cow position: chr24:25437564-25437834 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 59

Show alignments to all cow chromosomes.