Cow genome map

Conread name: OvF1-UMC-pd12fol-013-f01

Conread position: 1-322
Cow position: chr7:29368828-29368527 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 188, 24

Conread position: 1-322
Cow position: chr7:64239808-64239480 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 13

Conread position: 1-323
Cow position: chr7:59680048-59680363 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 64

Conread position: 2-249
Cow position: chr7:46900873-46900629 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 11

Conread position: 2-310
Cow position: chr7:63386930-63387252 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 110, 150

Conread position: 2-318
Cow position: chr7:20211873-20211576 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 164, 87

Conread position: 2-322
Cow position: chr7:45947941-45947641 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 11

Conread position: 2-332
Cow position: chr7:13532708-13532389 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 16

Conread position: 2-332
Cow position: chr7:21126464-21126153 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 11

Conread position: 2-332
Cow position: chr7:52763479-52763809 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 11

Conread position: 2-332
Cow position: chr7:61578704-61579025 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 11

Conread position: 3-254
Cow position: chr7:11462852-11462608 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 170
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 208, 107

Conread position: 3-292
Cow position: chr7:11447761-11448051 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 108

Conread position: 3-317
Cow position: chr7:10430226-10429921 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 108

Conread position: 3-321
Cow position: chr7:34487111-34487424 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-322
Cow position: chr7:1371447-1371134 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 108

Conread position: 3-322
Cow position: chr7:20774137-20773826 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 3-322
Cow position: chr7:66905919-66906239 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 108

Conread position: 3-324
Cow position: chr7:33332756-33333074 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 110

Conread position: 3-331
Cow position: chr7:20533146-20533463 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 185, 97

Conread position: 3-331
Cow position: chr7:20824522-20824842 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 12

Conread position: 3-332
Cow position: chr7:21233811-21233480 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-332
Cow position: chr7:24807276-24806960 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 110

Conread position: 3-332
Cow position: chr7:27101093-27100765 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 106

Conread position: 3-332
Cow position: chr7:38398013-38398343 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 90

Conread position: 3-332
Cow position: chr7:51015459-51015783 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 51

Conread position: 3-332
Cow position: chr7:55536729-55536403 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 108

Conread position: 3-332
Cow position: chr7:67800020-67800347 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 70

Conread position: 10-330
Cow position: chr7:48635639-48635939 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 96

Conread position: 11-320
Cow position: chr7:5261719-5261407 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 11-322
Cow position: chr7:6647460-6647162 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 102

Conread position: 11-331
Cow position: chr7:20060688-20061005 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-331
Cow position: chr7:57563893-57563581 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 177, 54

Conread position: 11-332
Cow position: chr7:995962-996267 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 96

Conread position: 11-332
Cow position: chr7:3299964-3299649 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 11-332
Cow position: chr7:5308909-5308591 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 82

Conread position: 11-332
Cow position: chr7:6721351-6721664 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 178, 34

Conread position: 11-332
Cow position: chr7:14214161-14213852 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 13

Conread position: 11-332
Cow position: chr7:29471669-29471993 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 116

Conread position: 11-332
Cow position: chr7:33311745-33311424 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr7:54649101-54649424 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 102

Conread position: 11-332
Cow position: chr7:65812026-65812346 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 99

Conread position: 12-330
Cow position: chr7:25136065-25136373 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 228
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 200, 84

Conread position: 12-330
Cow position: chr7:68439264-68439571 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 249, 102

Conread position: 13-243
Cow position: chr7:3124674-3124905 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 140, 9

Conread position: 13-332
Cow position: chr7:20514579-20514267 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 176, 98

Conread position: 14-330
Cow position: chr7:26852661-26852963 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 39, 46

Conread position: 15-254
Cow position: chr7:27606102-27605875 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 15-314
Cow position: chr7:19990226-19990520 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 87, 56

Conread position: 15-320
Cow position: chr7:57211359-57211662 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 96

Conread position: 15-320
Cow position: chr7:64350694-64351002 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 96

Conread position: 15-321
Cow position: chr7:58994794-58995083 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 98

Conread position: 15-321
Cow position: chr7:59138853-59139137 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 254, 96

Conread position: 15-322
Cow position: chr7:39554281-39553987 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 15-323
Cow position: chr7:21311657-21311963 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 96

Conread position: 15-332
Cow position: chr7:24878672-24878358 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 96

Conread position: 15-332
Cow position: chr7:55041281-55040962 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 95

Conread position: 16-282
Cow position: chr7:26460501-26460763 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 187
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 85, 96

Conread position: 16-331
Cow position: chr7:26830761-26830449 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 99

Conread position: 16-332
Cow position: chr7:526181-526491 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 59

Conread position: 16-332
Cow position: chr7:1609427-1609112 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 25

Conread position: 16-332
Cow position: chr7:34546572-34546875 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 173, 17

Conread position: 16-332
Cow position: chr7:49829118-49828808 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 97

Conread position: 17-317
Cow position: chr7:546055-546345 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 159, 93

Conread position: 17-321
Cow position: chr7:40268762-40268468 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 63, 53

Conread position: 17-322
Cow position: chr7:14138384-14138082 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 94

Conread position: 17-328
Cow position: chr7:67813716-67814016 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 164, 24

Conread position: 17-330
Cow position: chr7:5663776-5664088 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 35

Conread position: 17-331
Cow position: chr7:6701-7007 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 34

Conread position: 17-331
Cow position: chr7:47975105-47974777 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 237
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 96, 207

Conread position: 17-332
Cow position: chr7:6630090-6629780 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 91

Conread position: 17-332
Cow position: chr7:42871354-42871666 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 97

Conread position: 17-332
Cow position: chr7:62445936-62445633 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 93

Conread position: 18-256
Cow position: chr7:54786183-54785952 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 18-277
Cow position: chr7:3156680-3156938 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 93

Conread position: 18-288
Cow position: chr7:24058660-24058914 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 170, 96

Conread position: 18-315
Cow position: chr7:67489913-67490193 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 33

Conread position: 18-316
Cow position: chr7:41875064-41874771 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 98

Conread position: 18-332
Cow position: chr7:445051-444735 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 25

Conread position: 19-317
Cow position: chr7:67495317-67495605 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 178, 92

Conread position: 19-330
Cow position: chr7:67429787-67430087 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 80

Conread position: 26-321
Cow position: chr7:27788170-27788466 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 35

Conread position: 26-330
Cow position: chr7:63949832-63949530 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 223
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 54, 46

Conread position: 28-332
Cow position: chr7:21986639-21986927 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 126, 86

Conread position: 32-332
Cow position: chr7:48805215-48804917 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 78

Conread position: 37-332
Cow position: chr7:40320424-40320703 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 10

Conread position: 37-332
Cow position: chr7:66036399-66036691 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 73

Conread position: 45-332
Cow position: chr7:8143747-8143452 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 66

Conread position: 51-313
Cow position: chr7:67676336-67676580 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 32, 20

Show alignments to all cow chromosomes.