Cow genome map

Conread name: OvF1-UMC-pd12fol-013-f01

Conread position: 1-309
Cow position: chr8:44108097-44108394 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 168, 110

Conread position: 1-322
Cow position: chr8:60061781-60062094 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 110

Conread position: 1-332
Cow position: chr8:46051561-46051896 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 110

Conread position: 2-120
Cow position: chr8:11833117-11833233 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 2-315
Cow position: chr8:1320424-1320734 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 187, 11

Conread position: 2-317
Cow position: chr8:50929731-50929422 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 11

Conread position: 2-321
Cow position: chr8:14590515-14590181 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 11

Conread position: 2-330
Cow position: chr8:53427879-53428195 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 11

Conread position: 2-331
Cow position: chr8:2169140-2168816 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 110

Conread position: 2-332
Cow position: chr8:4687788-4688111 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 11

Conread position: 2-332
Cow position: chr8:5017565-5017891 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 11

Conread position: 2-332
Cow position: chr8:25775287-25774950 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 11

Conread position: 2-332
Cow position: chr8:42485299-42485621 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 109

Conread position: 2-332
Cow position: chr8:50995155-50995497 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 11

Conread position: 3-111
Cow position: chr8:44699582-44699690 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-232
Cow position: chr8:19331097-19331321 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 186, 108

Conread position: 3-252
Cow position: chr8:17312413-17312662 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 186, 58

Conread position: 3-255
Cow position: chr8:30486995-30486746 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 157, 38

Conread position: 3-289
Cow position: chr8:38605827-38605547 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 110

Conread position: 3-317
Cow position: chr8:29008021-29008319 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 80

Conread position: 3-319
Cow position: chr8:32318168-32317849 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 108

Conread position: 3-322
Cow position: chr8:3786021-3786326 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 3-322
Cow position: chr8:12450408-12450742 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 152

Conread position: 3-324
Cow position: chr8:3855642-3855324 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 88

Conread position: 3-331
Cow position: chr8:21157408-21157080 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-332
Cow position: chr8:8400730-8400407 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-332
Cow position: chr8:8911864-8912194 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 107

Conread position: 3-332
Cow position: chr8:10742284-10741935 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 129

Conread position: 3-332
Cow position: chr8:19051832-19052162 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 108

Conread position: 3-332
Cow position: chr8:24914952-24914611 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 238

Conread position: 3-332
Cow position: chr8:27579779-27580105 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 107

Conread position: 3-332
Cow position: chr8:32041379-32041057 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 107

Conread position: 3-332
Cow position: chr8:33589762-33590093 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 110

Conread position: 3-332
Cow position: chr8:42419047-42418728 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 104

Conread position: 3-332
Cow position: chr8:45145924-45145594 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 187, 96

Conread position: 3-332
Cow position: chr8:47068416-47068106 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 310, 48

Conread position: 3-332
Cow position: chr8:47660936-47660611 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 108

Conread position: 4-277
Cow position: chr8:5681674-5681411 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 140, 52

Conread position: 5-329
Cow position: chr8:25523785-25524104 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 106

Conread position: 5-332
Cow position: chr8:14927497-14927174 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 106

Conread position: 6-232
Cow position: chr8:42429104-42429326 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 182, 88

Conread position: 8-230
Cow position: chr8:25409118-25409338 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 86, 10

Conread position: 8-331
Cow position: chr8:30496170-30495868 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 304, 7

Conread position: 10-219
Cow position: chr8:49216122-49216325 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 179, 101

Conread position: 10-274
Cow position: chr8:49859374-49859118 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 179, 89

Conread position: 11-205
Cow position: chr8:2447606-2447799 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 178, 99

Conread position: 11-292
Cow position: chr8:6064395-6064115 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 178, 99

Conread position: 11-301
Cow position: chr8:22128964-22129250 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 100

Conread position: 11-313
Cow position: chr8:54017158-54016859 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 30

Conread position: 11-322
Cow position: chr8:14631278-14630965 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 107

Conread position: 11-324
Cow position: chr8:1347862-1347551 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 64

Conread position: 11-324
Cow position: chr8:55085928-55086229 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 11-332
Cow position: chr8:1152910-1152580 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 99

Conread position: 11-332
Cow position: chr8:10749749-10750056 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 100

Conread position: 11-332
Cow position: chr8:22570917-22570594 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 102

Conread position: 11-332
Cow position: chr8:33325439-33325761 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 100

Conread position: 11-332
Cow position: chr8:34349063-34349376 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr8:37654471-37654153 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr8:37656168-37655850 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr8:37932483-37932801 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 232
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 36, 107

Conread position: 11-332
Cow position: chr8:47454207-47453893 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 11-332
Cow position: chr8:50960210-50959899 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 102

Conread position: 14-186
Cow position: chr8:35213253-35213423 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 100

Conread position: 15-289
Cow position: chr8:1117915-1118184 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 174, 79

Conread position: 15-317
Cow position: chr8:46218344-46218062 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 175, 47

Conread position: 15-323
Cow position: chr8:23135214-23134912 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 96

Conread position: 15-323
Cow position: chr8:42656591-42656287 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 174, 27

Conread position: 15-332
Cow position: chr8:47674240-47674555 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 96

Conread position: 16-304
Cow position: chr8:34525821-34525543 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 95

Conread position: 16-330
Cow position: chr8:28878410-28878722 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 97

Conread position: 16-332
Cow position: chr8:11803219-11803527 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 94

Conread position: 17-285
Cow position: chr8:19190059-19190324 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 97

Conread position: 17-310
Cow position: chr8:12801806-12802097 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 8

Conread position: 17-322
Cow position: chr8:59261530-59261241 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 96

Conread position: 17-327
Cow position: chr8:56883920-56884233 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 70

Conread position: 17-331
Cow position: chr8:15409185-15409496 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 9, 98

Conread position: 17-332
Cow position: chr8:23772039-23772350 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 94

Conread position: 17-332
Cow position: chr8:51666419-51666106 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 25

Conread position: 18-317
Cow position: chr8:7399686-7399403 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 200
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 42

Conread position: 18-331
Cow position: chr8:31984527-31984843 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 95

Conread position: 18-332
Cow position: chr8:9539291-9538996 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 301, 93

Conread position: 18-332
Cow position: chr8:45691613-45691304 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 93

Conread position: 19-317
Cow position: chr8:41644273-41643996 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 19-320
Cow position: chr8:42579186-42578896 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 104, 72

Conread position: 19-332
Cow position: chr8:39194818-39194503 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 92

Conread position: 19-332
Cow position: chr8:58185190-58184883 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 80

Conread position: 31-332
Cow position: chr8:7162308-7162608 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 36-331
Cow position: chr8:31251918-31252199 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 202, 81

Conread position: 53-332
Cow position: chr8:14256509-14256785 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 57

Conread position: 64-331
Cow position: chr8:6764847-6764580 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 46

Conread position: 70-322
Cow position: chr8:38392060-38392325 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 203
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 43, 159

Show alignments to all cow chromosomes.