Cow genome map
Conread name: | OvF1-UMC-pd12fol-013-f01 |
Conread position: | 1-321 |
Cow position: | chr9:5005002-5005335 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 154 |
Conread position: | 1-322 |
Cow position: | chr9:828075-827754 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 112 |
Conread position: | 1-322 |
Cow position: | chr9:59537128-59537449 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 110 |
Conread position: | 1-332 |
Cow position: | chr9:13474738-13474412 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 90 |
Conread position: | 1-332 |
Cow position: | chr9:60276985-60276654 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 74 |
Conread position: | 2-322 |
Cow position: | chr9:22654612-22654930 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 2-322 |
Cow position: | chr9:35315846-35315539 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 217 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 188, 110 |
Conread position: | 2-324 |
Cow position: | chr9:21410333-21410653 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 11 |
Conread position: | 2-331 |
Cow position: | chr9:25632985-25632662 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 211 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 24, 110 |
Conread position: | 2-331 |
Cow position: | chr9:30435603-30435938 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 232 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 13, 220 |
Conread position: | 2-332 |
Cow position: | chr9:1995354-1995023 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 11 |
Conread position: | 2-332 |
Cow position: | chr9:3005205-3004886 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 115 |
Conread position: | 2-332 |
Cow position: | chr9:4533530-4533857 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 11 |
Conread position: | 2-332 |
Cow position: | chr9:9014118-9014436 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 109 |
Conread position: | 2-332 |
Cow position: | chr9:19158503-19158170 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 2-332 |
Cow position: | chr9:30673411-30673743 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 11 |
Conread position: | 2-332 |
Cow position: | chr9:37161776-37161451 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 2-332 |
Cow position: | chr9:42310714-42311041 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 11 |
Conread position: | 2-332 |
Cow position: | chr9:47042990-47043323 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 108 |
Conread position: | 2-332 |
Cow position: | chr9:51181141-51180816 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 11 |
Conread position: | 2-332 |
Cow position: | chr9:51211715-51212041 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 3-307 |
Cow position: | chr9:10322838-10323139 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 37 |
Conread position: | 3-314 |
Cow position: | chr9:49303622-49303323 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 218 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 187, 80 |
Conread position: | 3-322 |
Cow position: | chr9:2497942-2497621 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 46 |
Conread position: | 3-322 |
Cow position: | chr9:6250334-6250652 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 72 |
Conread position: | 3-322 |
Cow position: | chr9:28022841-28023151 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 93 |
Conread position: | 3-322 |
Cow position: | chr9:31808612-31808935 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 108 |
Conread position: | 3-322 |
Cow position: | chr9:47003221-47003528 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 110 |
Conread position: | 3-323 |
Cow position: | chr9:10937630-10937945 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 108 |
Conread position: | 3-324 |
Cow position: | chr9:37970172-37969857 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 3-325 |
Cow position: | chr9:16176804-16177105 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 237 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 310, 52 |
Conread position: | 3-331 |
Cow position: | chr9:25188135-25188459 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 111 |
Conread position: | 3-332 |
Cow position: | chr9:17304941-17304612 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 28 |
Conread position: | 3-332 |
Cow position: | chr9:18508787-18508460 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 3-332 |
Cow position: | chr9:29027176-29026844 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 107 |
Conread position: | 3-332 |
Cow position: | chr9:32969982-32970306 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 125 |
Conread position: | 3-332 |
Cow position: | chr9:59481761-59481434 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 108 |
Conread position: | 4-317 |
Cow position: | chr9:30488630-30488939 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 225 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 76, 140 |
Conread position: | 5-332 |
Cow position: | chr9:7061046-7060713 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 106 |
Conread position: | 6-261 |
Cow position: | chr9:26736792-26737044 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 193 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 183, 12 |
Conread position: | 6-320 |
Cow position: | chr9:4283005-4283328 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 231 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 92, 141 |
Conread position: | 6-330 |
Cow position: | chr9:54925586-54925899 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 229 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 249, 49 |
Conread position: | 10-332 |
Cow position: | chr9:38677186-38677507 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 101 |
Conread position: | 11-219 |
Cow position: | chr9:5798754-5798548 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-283 |
Cow position: | chr9:52033738-52034000 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 188 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 177, 60 |
Conread position: | 11-302 |
Cow position: | chr9:28679015-28679305 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 99 |
Conread position: | 11-321 |
Cow position: | chr9:30827780-30828091 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 99 |
Conread position: | 11-324 |
Cow position: | chr9:779778-779467 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 226 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-331 |
Cow position: | chr9:3764042-3764351 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 219 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 283, 99 |
Conread position: | 11-332 |
Cow position: | chr9:27935420-27935738 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 177, 99 |
Conread position: | 11-332 |
Cow position: | chr9:31065761-31066081 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 11-332 |
Cow position: | chr9:44384303-44384621 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 100 |
Conread position: | 11-332 |
Cow position: | chr9:46859419-46859101 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 178, 99 |
Conread position: | 15-250 |
Cow position: | chr9:20307963-20307730 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 176 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 79, 33 |
Conread position: | 15-326 |
Cow position: | chr9:3963083-3962765 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 201, 113 |
Conread position: | 15-331 |
Cow position: | chr9:6977380-6977686 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 223 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 131, 15 |
Conread position: | 15-331 |
Cow position: | chr9:26083510-26083207 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 77 |
Conread position: | 15-332 |
Cow position: | chr9:650980-650664 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 96 |
Conread position: | 15-332 |
Cow position: | chr9:44819195-44819506 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 22 |
Conread position: | 16-321 |
Cow position: | chr9:4649557-4649257 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 212 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 272, 26 |
Conread position: | 16-331 |
Cow position: | chr9:46042185-46041890 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 229 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 202, 95 |
Conread position: | 16-332 |
Cow position: | chr9:7158899-7158577 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 136 |
Conread position: | 16-332 |
Cow position: | chr9:20939367-20939674 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 94 |
Conread position: | 16-332 |
Cow position: | chr9:25034516-25034198 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 94 |
Conread position: | 17-322 |
Cow position: | chr9:4836292-4835989 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 218 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 102, 93 |
Conread position: | 17-322 |
Cow position: | chr9:27783237-27783538 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 94 |
Conread position: | 17-330 |
Cow position: | chr9:29627708-29627391 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 90 |
Conread position: | 17-331 |
Cow position: | chr9:2053972-2054277 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 228 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 77, 44 |
Conread position: | 17-331 |
Cow position: | chr9:3727652-3727954 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 224 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 100, 34 |
Conread position: | 19-332 |
Cow position: | chr9:1250950-1250639 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 92 |
Conread position: | 30-321 |
Cow position: | chr9:39730996-39730711 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 203 |
Alignm E-value: | 9e-36 |
Alignm gaps (pig, cow): | 246, 81 |
Conread position: | 37-322 |
Cow position: | chr9:25903574-25903876 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 214 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 150, 73 |
Conread position: | 37-331 |
Cow position: | chr9:8402439-8402725 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 218 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 94, 41 |
Conread position: | 38-322 |
Cow position: | chr9:1075119-1074825 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 209 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 151, 72 |
Conread position: | 38-331 |
Cow position: | chr9:35595009-35594721 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 207 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 106, 80 |
Conread position: | 48-324 |
Cow position: | chr9:3543947-3544234 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 211 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 65, 107 |
Show alignments to all cow chromosomes.