Cow genome map
| Conread name: | OvF1-UMC-pd12fol-013-f01 |
| Conread position: | 1-289 |
| Cow position: | chrX:27495621-27495904 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 139, 113 |
| Conread position: | 1-317 |
| Cow position: | chrX:23277963-23278273 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 112 |
| Conread position: | 1-317 |
| Cow position: | chrX:28626691-28626378 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 76 |
| Conread position: | 1-320 |
| Cow position: | chrX:30170893-30170589 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 35 |
| Conread position: | 1-322 |
| Cow position: | chrX:23389579-23389261 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 110 |
| Conread position: | 1-322 |
| Cow position: | chrX:30231158-30230842 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 110 |
| Conread position: | 1-325 |
| Cow position: | chrX:34219251-34219558 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 70 |
| Conread position: | 1-330 |
| Cow position: | chrX:18553369-18553690 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 156, 89 |
| Conread position: | 1-332 |
| Cow position: | chrX:971719-972038 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 110 |
| Conread position: | 1-332 |
| Cow position: | chrX:23040184-23039860 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 113 |
| Conread position: | 1-332 |
| Cow position: | chrX:30183000-30182658 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 109 |
| Conread position: | 2-209 |
| Cow position: | chrX:5394063-5393859 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 2-228 |
| Cow position: | chrX:10416510-10416290 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 180, 10 |
| Conread position: | 2-266 |
| Cow position: | chrX:9093516-9093779 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 11 |
| Conread position: | 2-268 |
| Cow position: | chrX:8480593-8480862 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 2-281 |
| Cow position: | chrX:983604-983882 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 187, 108 |
| Conread position: | 2-317 |
| Cow position: | chrX:5335543-5335228 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 2-322 |
| Cow position: | chrX:29172820-29172502 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 11 |
| Conread position: | 2-324 |
| Cow position: | chrX:14595785-14596106 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 108 |
| Conread position: | 2-331 |
| Cow position: | chrX:24134319-24134003 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 316, 110 |
| Conread position: | 2-331 |
| Cow position: | chrX:24476246-24475935 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 311, 83 |
| Conread position: | 2-332 |
| Cow position: | chrX:11422813-11423136 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 11 |
| Conread position: | 2-332 |
| Cow position: | chrX:16463378-16463048 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 112 |
| Conread position: | 2-332 |
| Cow position: | chrX:26757672-26757360 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 11 |
| Conread position: | 2-332 |
| Cow position: | chrX:28650612-28650281 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 2-332 |
| Cow position: | chrX:30057992-30058318 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 3-213 |
| Cow position: | chrX:29852627-29852413 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 137, 108 |
| Conread position: | 3-317 |
| Cow position: | chrX:8610760-8610451 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 108 |
| Conread position: | 3-317 |
| Cow position: | chrX:16276588-16276901 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 108 |
| Conread position: | 3-317 |
| Cow position: | chrX:30068905-30068597 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 100 |
| Conread position: | 3-320 |
| Cow position: | chrX:45377159-45376837 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 48 |
| Conread position: | 3-321 |
| Cow position: | chrX:22489085-22489413 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 3-322 |
| Cow position: | chrX:31199504-31199814 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 107 |
| Conread position: | 3-327 |
| Cow position: | chrX:12668809-12668477 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 82, 113 |
| Conread position: | 3-327 |
| Cow position: | chrX:21491095-21491427 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 59 |
| Conread position: | 3-331 |
| Cow position: | chrX:5322786-5322458 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 107 |
| Conread position: | 3-331 |
| Cow position: | chrX:7031404-7031730 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 3-331 |
| Cow position: | chrX:29097137-29097465 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 3-332 |
| Cow position: | chrX:1547920-1548249 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 108 |
| Conread position: | 3-332 |
| Cow position: | chrX:2481690-2481360 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 73 |
| Conread position: | 3-332 |
| Cow position: | chrX:2577367-2577694 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 107 |
| Conread position: | 3-332 |
| Cow position: | chrX:12183879-12184213 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 45 |
| Conread position: | 3-332 |
| Cow position: | chrX:12314810-12314492 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 311, 104 |
| Conread position: | 3-332 |
| Cow position: | chrX:13412192-13411864 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 107 |
| Conread position: | 3-332 |
| Cow position: | chrX:15126285-15125960 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 110 |
| Conread position: | 3-332 |
| Cow position: | chrX:17052484-17052815 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 107 |
| Conread position: | 3-332 |
| Cow position: | chrX:21830471-21830782 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 108 |
| Conread position: | 3-332 |
| Cow position: | chrX:26528916-26529234 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 3-332 |
| Cow position: | chrX:26766259-26765932 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 108 |
| Conread position: | 3-332 |
| Cow position: | chrX:27316217-27316548 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 104 |
| Conread position: | 3-332 |
| Cow position: | chrX:37015064-37015386 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 186, 96 |
| Conread position: | 5-332 |
| Cow position: | chrX:18658851-18658538 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 183, 105 |
| Conread position: | 6-111 |
| Cow position: | chrX:13416488-13416383 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-202 |
| Cow position: | chrX:23132914-23133104 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 181, 103 |
| Conread position: | 11-187 |
| Cow position: | chrX:48368095-48367922 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 11-217 |
| Cow position: | chrX:22618360-22618155 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 178, 100 |
| Conread position: | 11-277 |
| Cow position: | chrX:8574541-8574285 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 179, 57 |
| Conread position: | 11-283 |
| Cow position: | chrX:7094351-7094622 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 178, 103 |
| Conread position: | 11-290 |
| Cow position: | chrX:9126310-9126588 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 129, 99 |
| Conread position: | 11-304 |
| Cow position: | chrX:5864343-5864635 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 99 |
| Conread position: | 11-314 |
| Cow position: | chrX:7482581-7482883 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-322 |
| Cow position: | chrX:674253-673947 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-322 |
| Cow position: | chrX:3374959-3374651 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-322 |
| Cow position: | chrX:3467697-3467386 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-322 |
| Cow position: | chrX:12287454-12287144 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 99 |
| Conread position: | 11-322 |
| Cow position: | chrX:14460473-14460774 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 178, 102 |
| Conread position: | 11-322 |
| Cow position: | chrX:15980009-15979699 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-322 |
| Cow position: | chrX:35530802-35531113 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-323 |
| Cow position: | chrX:29910480-29910170 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 88 |
| Conread position: | 11-324 |
| Cow position: | chrX:13397270-13396958 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-330 |
| Cow position: | chrX:5651687-5651387 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 11-330 |
| Cow position: | chrX:6014001-6013701 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 11-332 |
| Cow position: | chrX:2815532-2815219 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:2858426-2858113 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:3084188-3083867 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 83 |
| Conread position: | 11-332 |
| Cow position: | chrX:6872121-6871805 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 102 |
| Conread position: | 11-332 |
| Cow position: | chrX:8589111-8589428 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:12343885-12344208 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:12354184-12354507 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 63 |
| Conread position: | 11-332 |
| Cow position: | chrX:12653574-12653241 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 11-332 |
| Cow position: | chrX:12702754-12702434 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 178, 102 |
| Conread position: | 11-332 |
| Cow position: | chrX:15623551-15623234 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 92 |
| Conread position: | 11-332 |
| Cow position: | chrX:17477475-17477157 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:18220372-18220694 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 83, 102 |
| Conread position: | 11-332 |
| Cow position: | chrX:18451928-18452246 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:21643956-21643632 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:27425376-27425052 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 100 |
| Conread position: | 11-332 |
| Cow position: | chrX:28521646-28521335 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:28585929-28586246 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:29935546-29935864 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:30011948-30012264 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 178, 102 |
| Conread position: | 11-332 |
| Cow position: | chrX:32066218-32065898 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 177, 99 |
| Conread position: | 11-332 |
| Cow position: | chrX:37813101-37813422 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 99 |
| Conread position: | 12-322 |
| Cow position: | chrX:38148547-38148852 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 6 |
| Conread position: | 13-329 |
| Cow position: | chrX:35940311-35940012 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 15-310 |
| Cow position: | chrX:44388716-44389008 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 26 |
| Conread position: | 15-322 |
| Cow position: | chrX:29949645-29949341 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 96 |
| Conread position: | 15-327 |
| Cow position: | chrX:27961812-27962117 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 36 |
| Conread position: | 15-329 |
| Cow position: | chrX:2535116-2534806 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 96 |
| Conread position: | 15-332 |
| Cow position: | chrX:17666831-17666524 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 102 |
| Conread position: | 15-332 |
| Cow position: | chrX:21589946-21590252 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 15-332 |
| Cow position: | chrX:30138623-30138307 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 26 |
| Conread position: | 15-332 |
| Cow position: | chrX:46235696-46236016 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 84 |
| Conread position: | 16-223 |
| Cow position: | chrX:15590941-15591138 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 16-283 |
| Cow position: | chrX:12461766-12462015 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 16-322 |
| Cow position: | chrX:16811491-16811187 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 97 |
| Conread position: | 16-331 |
| Cow position: | chrX:11148382-11148065 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 94 |
| Conread position: | 16-332 |
| Cow position: | chrX:5296590-5296287 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 77 |
| Conread position: | 16-332 |
| Cow position: | chrX:13075742-13075425 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 94 |
| Conread position: | 16-332 |
| Cow position: | chrX:13096305-13095988 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 94 |
| Conread position: | 16-332 |
| Cow position: | chrX:29286388-29286700 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 95 |
| Conread position: | 16-332 |
| Cow position: | chrX:30201777-30201472 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 173, 94 |
| Conread position: | 17-158 |
| Cow position: | chrX:16700274-16700411 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 17-319 |
| Cow position: | chrX:35386239-35385946 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 202, 24 |
| Conread position: | 17-321 |
| Cow position: | chrX:26426627-26426333 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 171, 96 |
| Conread position: | 17-322 |
| Cow position: | chrX:27593031-27592728 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 82 |
| Conread position: | 17-322 |
| Cow position: | chrX:31053732-31053442 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 171, 54 |
| Conread position: | 17-331 |
| Cow position: | chrX:20798276-20798576 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 171, 70 |
| Conread position: | 17-331 |
| Cow position: | chrX:28868290-28867977 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 94 |
| Conread position: | 17-332 |
| Cow position: | chrX:321421-321735 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 147, 117 |
| Conread position: | 17-332 |
| Cow position: | chrX:5356868-5356555 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 96 |
| Conread position: | 17-332 |
| Cow position: | chrX:7752855-7753178 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 93 |
| Conread position: | 17-332 |
| Cow position: | chrX:9009294-9009604 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 93 |
| Conread position: | 17-332 |
| Cow position: | chrX:15178481-15178164 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 93 |
| Conread position: | 17-332 |
| Cow position: | chrX:23455062-23454749 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 94 |
| Conread position: | 17-332 |
| Cow position: | chrX:27083922-27084238 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 93 |
| Conread position: | 17-332 |
| Cow position: | chrX:27986867-27986561 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 94 |
| Conread position: | 17-332 |
| Cow position: | chrX:29885945-29886259 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 93 |
| Conread position: | 18-326 |
| Cow position: | chrX:3621259-3621567 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 18-331 |
| Cow position: | chrX:47396576-47396267 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 18-332 |
| Cow position: | chrX:30365827-30365530 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 170, 85 |
| Conread position: | 19-317 |
| Cow position: | chrX:15600117-15600399 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 19-322 |
| Cow position: | chrX:29793074-29792771 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 92 |
| Conread position: | 19-332 |
| Cow position: | chrX:18952725-18952407 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 21-332 |
| Cow position: | chrX:24771904-24771592 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 89 |
| Conread position: | 25-320 |
| Cow position: | chrX:21059742-21060021 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 85 |
| Conread position: | 26-332 |
| Cow position: | chrX:20695857-20695557 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 68 |
| Conread position: | 37-332 |
| Cow position: | chrX:41850225-41849942 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 282, 66 |
| Conread position: | 44-324 |
| Cow position: | chrX:36136576-36136307 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 73 |
| Conread position: | 47-331 |
| Cow position: | chrX:21269053-21268780 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 271, 67 |
| Conread position: | 47-332 |
| Cow position: | chrX:20035417-20035135 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 51-332 |
| Cow position: | chrX:16780271-16780553 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 55-332 |
| Cow position: | chrX:13447834-13447561 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 134, 55 |
| Conread position: | 62-332 |
| Cow position: | chrX:16684837-16684566 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 127, 48 |
| Conread position: | 79-317 |
| Cow position: | chrX:22128707-22128489 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.