Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 1-226 |
| Cow position: | chr10:19708951-19709177 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 96 |
| Conread position: | 1-368 |
| Cow position: | chr10:21081014-21081380 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 1-368 |
| Cow position: | chr10:24309008-24308640 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 78 |
| Conread position: | 1-368 |
| Cow position: | chr10:27120724-27120374 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 71 |
| Conread position: | 2-266 |
| Cow position: | chr10:63938553-63938815 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 44 |
| Conread position: | 2-342 |
| Cow position: | chr10:55036602-55036934 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 99 |
| Conread position: | 2-349 |
| Cow position: | chr10:39876260-39875928 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 62 |
| Conread position: | 2-363 |
| Cow position: | chr10:5785051-5784709 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 78 |
| Conread position: | 2-367 |
| Cow position: | chr10:3984298-3984647 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 95 |
| Conread position: | 2-367 |
| Cow position: | chr10:21450013-21449660 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 2-367 |
| Cow position: | chr10:23913667-23913316 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 21 |
| Conread position: | 2-367 |
| Cow position: | chr10:42643735-42644087 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 2-368 |
| Cow position: | chr10:1720680-1720326 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 2-368 |
| Cow position: | chr10:2612274-2612623 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 44 |
| Conread position: | 2-368 |
| Cow position: | chr10:4995708-4995353 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 71, 100 |
| Conread position: | 2-368 |
| Cow position: | chr10:8459412-8459763 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 119 |
| Conread position: | 2-368 |
| Cow position: | chr10:10722064-10721715 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 43 |
| Conread position: | 2-368 |
| Cow position: | chr10:16647124-16646772 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 60 |
| Conread position: | 2-368 |
| Cow position: | chr10:25341296-25341646 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 43 |
| Conread position: | 2-368 |
| Cow position: | chr10:28040377-28040025 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr10:28339518-28339872 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 2-368 |
| Cow position: | chr10:45484818-45484468 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 83 |
| Conread position: | 2-368 |
| Cow position: | chr10:48170708-48171070 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 116, 59 |
| Conread position: | 2-368 |
| Cow position: | chr10:65131861-65131515 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 260 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 167, 99 |
| Conread position: | 2-370 |
| Cow position: | chr10:4343985-4343623 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 141, 98 |
| Conread position: | 2-370 |
| Cow position: | chr10:20373245-20372887 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 173, 101 |
| Conread position: | 2-370 |
| Cow position: | chr10:20445995-20446356 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 254 |
| Conread position: | 2-370 |
| Cow position: | chr10:28775016-28775377 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 53 |
| Conread position: | 2-370 |
| Cow position: | chr10:31375227-31374874 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 28 |
| Conread position: | 2-370 |
| Cow position: | chr10:38941305-38941661 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 188, 12 |
| Conread position: | 2-370 |
| Cow position: | chr10:46194659-46195023 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 93 |
| Conread position: | 2-372 |
| Cow position: | chr10:1979795-1979439 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 3-364 |
| Cow position: | chr10:64287187-64286843 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 3-368 |
| Cow position: | chr10:10147521-10147861 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 4-368 |
| Cow position: | chr10:3506951-3506606 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 4-368 |
| Cow position: | chr10:31526897-31527237 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 244, 38 |
| Conread position: | 4-368 |
| Cow position: | chr10:53059122-53058766 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 161, 97 |
| Conread position: | 4-368 |
| Cow position: | chr10:60959808-60960150 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 46 |
| Conread position: | 4-370 |
| Cow position: | chr10:63954692-63955037 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 5-368 |
| Cow position: | chr10:22529033-22528685 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 80 |
| Conread position: | 13-370 |
| Cow position: | chr10:14846451-14846787 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 235, 78 |
| Conread position: | 14-367 |
| Cow position: | chr10:26732747-26732431 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 14-368 |
| Cow position: | chr10:10570358-10570697 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 168, 87 |
| Conread position: | 14-368 |
| Cow position: | chr10:57553942-57553601 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 67 |
| Conread position: | 15-358 |
| Cow position: | chr10:42111992-42112321 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 17-368 |
| Cow position: | chr10:29106620-29106286 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 20-346 |
| Cow position: | chr10:49914555-49914240 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 81 |
| Conread position: | 20-368 |
| Cow position: | chr10:44705506-44705174 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 27-370 |
| Cow position: | chr10:76309-76630 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 74 |
| Conread position: | 30-365 |
| Cow position: | chr10:8219723-8220040 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 30-372 |
| Cow position: | chr10:32560331-32560657 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 31-350 |
| Cow position: | chr10:8469218-8469529 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 31-367 |
| Cow position: | chr10:25866481-25866155 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 31-368 |
| Cow position: | chr10:28568650-28568965 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 157, 70 |
| Conread position: | 34-370 |
| Cow position: | chr10:24974439-24974109 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 67 |
| Conread position: | 37-368 |
| Cow position: | chr10:44866095-44866414 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 45-368 |
| Cow position: | chr10:22320450-22320759 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 58 |
| Conread position: | 46-358 |
| Cow position: | chr10:19894240-19894532 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 201, 55 |
| Conread position: | 66-368 |
| Cow position: | chr10:39775332-39775053 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 75-359 |
| Cow position: | chr10:31006059-31005785 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 56 |
| Conread position: | 92-368 |
| Cow position: | chr10:29815561-29815822 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 9 |
| Conread position: | 103-360 |
| Cow position: | chr10:16091367-16091614 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 89, 149 |
| Conread position: | 123-370 |
| Cow position: | chr10:6850527-6850759 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 126-370 |
| Cow position: | chr10:57143557-57143322 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 152-368 |
| Cow position: | chr10:8094296-8094095 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 167-370 |
| Cow position: | chr10:31533792-31533984 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 190-344 |
| Cow position: | chr10:22471376-22471527 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 205-367 |
| Cow position: | chr10:48256354-48256199 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 45 |
Show alignments to all cow chromosomes.