Cow genome map
Conread name: | OvF2-UMC-pd0fol-009-c04 |
Conread position: | 1-368 |
Cow position: | chr11:67599402-67599748 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 102 |
Conread position: | 2-199 |
Cow position: | chr11:45633274-45633083 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 160 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 188, 75 |
Conread position: | 2-255 |
Cow position: | chr11:30057031-30057286 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 95 |
Conread position: | 2-261 |
Cow position: | chr11:41599864-41599597 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 95 |
Conread position: | 2-349 |
Cow position: | chr11:17782203-17781871 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 99 |
Conread position: | 2-349 |
Cow position: | chr11:38640775-38641109 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 240 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 158, 95 |
Conread position: | 2-359 |
Cow position: | chr11:54728288-54728632 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 250 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 188, 99 |
Conread position: | 2-361 |
Cow position: | chr11:22933798-22933456 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 248 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 191, 9 |
Conread position: | 2-366 |
Cow position: | chr11:44254898-44255249 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 249 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 188, 98 |
Conread position: | 2-368 |
Cow position: | chr11:16229823-16229476 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 2-368 |
Cow position: | chr11:18105862-18105507 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 255 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 203, 28 |
Conread position: | 2-368 |
Cow position: | chr11:19507154-19507505 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 89 |
Conread position: | 2-368 |
Cow position: | chr11:24600814-24601178 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 233, 95 |
Conread position: | 2-368 |
Cow position: | chr11:26550302-26550654 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 13 |
Conread position: | 2-368 |
Cow position: | chr11:48427972-48428321 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 53 |
Conread position: | 2-368 |
Cow position: | chr11:74928627-74928974 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 2-368 |
Cow position: | chr11:84773989-84774343 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 94 |
Conread position: | 2-370 |
Cow position: | chr11:260324-259964 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 78 |
Conread position: | 2-370 |
Cow position: | chr11:12763365-12763007 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 95 |
Conread position: | 2-370 |
Cow position: | chr11:25808923-25808566 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 262 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 188, 94 |
Conread position: | 2-370 |
Cow position: | chr11:58804996-58804644 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 83 |
Conread position: | 2-372 |
Cow position: | chr11:21729196-21728841 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 100 |
Conread position: | 2-372 |
Cow position: | chr11:27833933-27833574 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 251 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 72, 101 |
Conread position: | 3-370 |
Cow position: | chr11:40458000-40458356 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 250 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 83, 103 |
Conread position: | 4-368 |
Cow position: | chr11:4206004-4206350 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 77 |
Conread position: | 4-370 |
Cow position: | chr11:27660060-27660418 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 69 |
Conread position: | 4-370 |
Cow position: | chr11:75354029-75354386 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 98 |
Conread position: | 14-350 |
Cow position: | chr11:26068283-26067949 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 239 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 72, 245 |
Conread position: | 14-350 |
Cow position: | chr11:37279738-37279420 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 233 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 176, 87 |
Conread position: | 14-363 |
Cow position: | chr11:1667463-1667794 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 247 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 176, 26 |
Conread position: | 14-367 |
Cow position: | chr11:30700330-30700671 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 246 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 176, 87 |
Conread position: | 14-370 |
Cow position: | chr11:17980456-17980116 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 252 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 176, 87 |
Conread position: | 14-372 |
Cow position: | chr11:19490375-19490723 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 237 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 85, 13 |
Conread position: | 16-358 |
Cow position: | chr11:68130248-68130569 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 234 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 9, 87 |
Conread position: | 17-368 |
Cow position: | chr11:2835103-2835438 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 241 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 175, 84 |
Conread position: | 22-368 |
Cow position: | chr11:56652395-56652064 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 251 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 33, 45 |
Conread position: | 23-368 |
Cow position: | chr11:31836035-31836362 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 249 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 125, 63 |
Conread position: | 26-370 |
Cow position: | chr11:77746358-77746026 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 246 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 156, 54 |
Conread position: | 33-365 |
Cow position: | chr11:49935893-49935573 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 68 |
Conread position: | 35-350 |
Cow position: | chr11:4053478-4053191 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 218 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 36-368 |
Cow position: | chr11:26482430-26482751 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 65 |
Conread position: | 42-372 |
Cow position: | chr11:30790936-30790611 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 220 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 6, 40 |
Conread position: | 50-342 |
Cow position: | chr11:38069167-38069451 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 212 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 68, 51 |
Conread position: | 51-366 |
Cow position: | chr11:21853378-21853075 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 50 |
Conread position: | 55-368 |
Cow position: | chr11:63167638-63167345 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 48 |
Conread position: | 61-370 |
Cow position: | chr11:56227812-56228109 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 40 |
Conread position: | 68-370 |
Cow position: | chr11:3230214-3230500 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 33 |
Conread position: | 75-368 |
Cow position: | chr11:46412531-46412813 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 208 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 117, 26 |
Conread position: | 81-363 |
Cow position: | chr11:1626251-1625985 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 214 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 108, 21 |
Conread position: | 87-368 |
Cow position: | chr11:43917341-43917612 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 196 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 15, 165 |
Conread position: | 88-368 |
Cow position: | chr11:21372171-21371903 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 198 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 102, 13 |
Conread position: | 89-368 |
Cow position: | chr11:10214639-10214342 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 224 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 69, 12 |
Conread position: | 106-368 |
Cow position: | chr11:70602350-70602105 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 87, 23 |
Conread position: | 110-368 |
Cow position: | chr11:8498998-8499244 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 181 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 79, 20 |
Conread position: | 117-370 |
Cow position: | chr11:52298225-52297982 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 197 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 73, 135 |
Conread position: | 122-370 |
Cow position: | chr11:2308856-2309099 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 191 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 39, 139 |
Conread position: | 149-358 |
Cow position: | chr11:37069277-37069069 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 145 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 100, 120 |
Show alignments to all cow chromosomes.