Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 1-344 |
| Cow position: | chr13:38013752-38013427 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 47 |
| Conread position: | 1-368 |
| Cow position: | chr13:32549657-32550023 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 96 |
| Conread position: | 1-370 |
| Cow position: | chr13:22084670-22085024 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 32 |
| Conread position: | 2-226 |
| Cow position: | chr13:47577492-47577717 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 55 |
| Conread position: | 2-266 |
| Cow position: | chr13:34051521-34051786 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 95 |
| Conread position: | 2-331 |
| Cow position: | chr13:3001443-3001134 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 72 |
| Conread position: | 2-334 |
| Cow position: | chr13:18097723-18097402 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 100 |
| Conread position: | 2-364 |
| Cow position: | chr13:44324062-44323716 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-366 |
| Cow position: | chr13:22907370-22907017 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 82 |
| Conread position: | 2-366 |
| Cow position: | chr13:26823221-26822879 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 92 |
| Conread position: | 2-368 |
| Cow position: | chr13:12618023-12618370 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 29 |
| Conread position: | 2-368 |
| Cow position: | chr13:19394219-19393871 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 31 |
| Conread position: | 2-368 |
| Cow position: | chr13:23266930-23266579 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 99 |
| Conread position: | 2-368 |
| Cow position: | chr13:31608540-31608184 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 146, 39 |
| Conread position: | 2-368 |
| Cow position: | chr13:34905675-34905332 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 2-370 |
| Cow position: | chr13:17495983-17496341 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 48 |
| Conread position: | 2-370 |
| Cow position: | chr13:19843371-19843720 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 27 |
| Conread position: | 2-371 |
| Cow position: | chr13:16249043-16248685 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 99 |
| Conread position: | 3-368 |
| Cow position: | chr13:21906018-21905659 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 98 |
| Conread position: | 15-345 |
| Cow position: | chr13:10732892-10733209 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 169, 86 |
| Conread position: | 15-368 |
| Cow position: | chr13:22781074-22780735 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 178, 86 |
| Conread position: | 20-350 |
| Cow position: | chr13:30652367-30652049 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 135, 80 |
| Conread position: | 21-370 |
| Cow position: | chr13:52085379-52085045 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 80 |
| Conread position: | 57-368 |
| Cow position: | chr13:48945981-48945692 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 222, 24 |
| Conread position: | 61-370 |
| Cow position: | chr13:15256838-15257143 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 85-346 |
| Cow position: | chr13:11822955-11822696 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 97-370 |
| Cow position: | chr13:30241558-30241820 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 102-368 |
| Cow position: | chr13:16345146-16344894 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 88, 25 |
| Conread position: | 117-370 |
| Cow position: | chr13:60392547-60392790 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 191 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 158-368 |
| Cow position: | chr13:12572389-12572191 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 160-362 |
| Cow position: | chr13:46524251-46524450 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 165 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 161-370 |
| Cow position: | chr13:24059385-24059582 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 165-370 |
| Cow position: | chr13:15458774-15458959 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 166-368 |
| Cow position: | chr13:47313636-47313445 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 201-370 |
| Cow position: | chr13:43120188-43120023 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 85 |
Show alignments to all cow chromosomes.