Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 1-141 |
| Cow position: | chr14:38915313-38915174 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 2-153 |
| Cow position: | chr14:39773339-39773490 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 2-346 |
| Cow position: | chr14:49328740-49329074 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 50, 100 |
| Conread position: | 2-359 |
| Cow position: | chr14:423955-424294 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 101 |
| Conread position: | 2-359 |
| Cow position: | chr14:12545433-12545782 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 94 |
| Conread position: | 2-365 |
| Cow position: | chr14:12613000-12613346 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 70, 101 |
| Conread position: | 2-367 |
| Cow position: | chr14:24922552-24922905 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 99 |
| Conread position: | 2-367 |
| Cow position: | chr14:38405745-38406106 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 263 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 70, 104 |
| Conread position: | 2-368 |
| Cow position: | chr14:8102903-8102554 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 56 |
| Conread position: | 2-368 |
| Cow position: | chr14:10310328-10310682 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr14:13581639-13581992 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 59 |
| Conread position: | 2-368 |
| Cow position: | chr14:13811266-13810915 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 100 |
| Conread position: | 2-368 |
| Cow position: | chr14:19489750-19490106 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-368 |
| Cow position: | chr14:21533907-21534257 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 2-368 |
| Cow position: | chr14:41445774-41446134 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 248 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 131, 99 |
| Conread position: | 2-370 |
| Cow position: | chr14:24836572-24836935 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 97 |
| Conread position: | 2-370 |
| Cow position: | chr14:45187066-45186709 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 145, 103 |
| Conread position: | 3-268 |
| Cow position: | chr14:13559932-13560202 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 3-368 |
| Cow position: | chr14:33835240-33834887 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 98 |
| Conread position: | 4-368 |
| Cow position: | chr14:46960158-46960510 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 97 |
| Conread position: | 4-368 |
| Cow position: | chr14:50137043-50137391 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 39 |
| Conread position: | 14-350 |
| Cow position: | chr14:21200705-21201027 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 243 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 121, 36 |
| Conread position: | 14-364 |
| Cow position: | chr14:24124385-24124750 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 167 |
| Conread position: | 14-368 |
| Cow position: | chr14:31759800-31759455 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 199, 78 |
| Conread position: | 14-368 |
| Cow position: | chr14:35419658-35419990 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 245 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 176, 36 |
| Conread position: | 14-368 |
| Cow position: | chr14:45025848-45025506 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 248 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 150, 87 |
| Conread position: | 15-367 |
| Cow position: | chr14:35497303-35497641 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 113, 27 |
| Conread position: | 17-359 |
| Cow position: | chr14:44554630-44554954 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 171, 84 |
| Conread position: | 17-372 |
| Cow position: | chr14:41962803-41962435 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 84 |
| Conread position: | 20-368 |
| Cow position: | chr14:28116848-28117180 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 81 |
| Conread position: | 37-368 |
| Cow position: | chr14:30665124-30664811 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 153, 14 |
| Conread position: | 56-368 |
| Cow position: | chr14:41081821-41081519 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 57-350 |
| Cow position: | chr14:35382664-35382393 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 76-368 |
| Cow position: | chr14:38391087-38391366 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 88-368 |
| Cow position: | chr14:14786461-14786194 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 111, 13 |
| Conread position: | 95-368 |
| Cow position: | chr14:23215066-23215323 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 231, 17 |
| Conread position: | 97-368 |
| Cow position: | chr14:41717364-41717097 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 135-368 |
| Cow position: | chr14:37677281-37677504 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 112 |
| Conread position: | 184-366 |
| Cow position: | chr14:12243432-12243599 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 184-368 |
| Cow position: | chr14:28497089-28496914 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 184-368 |
| Cow position: | chr14:46489305-46489477 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 75 |
Show alignments to all cow chromosomes.