Cow genome map

Conread name: OvF2-UMC-pd0fol-009-c04

Conread position: 1-266
Cow position: chr15:44378293-44378558 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 246, 96

Conread position: 1-362
Cow position: chr15:47201796-47201454 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 61

Conread position: 2-184
Cow position: chr15:503085-503266 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 95, 0

Conread position: 2-241
Cow position: chr15:24969175-24968951 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 96

Conread position: 2-259
Cow position: chr15:17237114-17236842 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 91

Conread position: 2-266
Cow position: chr15:662153-661892 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 140, 95

Conread position: 2-310
Cow position: chr15:24048041-24048350 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 151, 99

Conread position: 2-350
Cow position: chr15:5983400-5983738 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 182, 101

Conread position: 2-360
Cow position: chr15:26157783-26158137 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 90

Conread position: 2-363
Cow position: chr15:51220515-51220867 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 254
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 180, 99

Conread position: 2-364
Cow position: chr15:23774076-23774419 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 95

Conread position: 2-365
Cow position: chr15:33229278-33228931 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 99

Conread position: 2-366
Cow position: chr15:313027-312674 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 183, 28

Conread position: 2-366
Cow position: chr15:13076293-13076644 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 99

Conread position: 2-366
Cow position: chr15:20458099-20458455 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 173, 95

Conread position: 2-368
Cow position: chr15:1082210-1082564 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 184, 60

Conread position: 2-368
Cow position: chr15:1129218-1128864 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 184, 60

Conread position: 2-368
Cow position: chr15:4688805-4689160 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 80

Conread position: 2-368
Cow position: chr15:4788025-4787674 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 43

Conread position: 2-368
Cow position: chr15:4829109-4829461 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 99

Conread position: 2-368
Cow position: chr15:6805486-6805840 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 143, 56

Conread position: 2-368
Cow position: chr15:7941199-7941544 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 146, 53

Conread position: 2-368
Cow position: chr15:10736341-10736692 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 94

Conread position: 2-368
Cow position: chr15:17267287-17267642 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 162, 99

Conread position: 2-370
Cow position: chr15:6281425-6281772 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 152, 49

Conread position: 2-370
Cow position: chr15:29341332-29340973 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 76

Conread position: 2-370
Cow position: chr15:41359776-41360131 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 78

Conread position: 2-372
Cow position: chr15:35643678-35643330 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 211, 99

Conread position: 3-368
Cow position: chr15:4924932-4925276 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 0

Conread position: 3-368
Cow position: chr15:30045172-30045534 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 94

Conread position: 3-368
Cow position: chr15:50344956-50344608 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 98

Conread position: 3-370
Cow position: chr15:36356291-36355940 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 24

Conread position: 4-340
Cow position: chr15:4081776-4082101 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 186, 97

Conread position: 4-368
Cow position: chr15:25132732-25133089 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 156, 98

Conread position: 5-349
Cow position: chr15:4654244-4654595 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 185, 91

Conread position: 14-328
Cow position: chr15:21366834-21366523 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 29, 9

Conread position: 14-350
Cow position: chr15:1775946-1776271 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 87

Conread position: 14-365
Cow position: chr15:32065504-32065165 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 78

Conread position: 14-366
Cow position: chr15:37382804-37382464 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 87

Conread position: 14-368
Cow position: chr15:18019598-18019260 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 77

Conread position: 14-368
Cow position: chr15:38983446-38983801 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 87

Conread position: 14-372
Cow position: chr15:16787846-16787514 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 176, 60

Conread position: 15-368
Cow position: chr15:7271121-7271466 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 51, 89

Conread position: 20-346
Cow position: chr15:336476-336786 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 207
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 26-370
Cow position: chr15:21911513-21911172 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 25

Conread position: 31-368
Cow position: chr15:13388544-13388222 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 30

Conread position: 32-368
Cow position: chr15:14756984-14757309 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 47

Conread position: 34-364
Cow position: chr15:20352999-20352677 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 69

Conread position: 75-346
Cow position: chr15:3653230-3652950 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 26

Conread position: 81-368
Cow position: chr15:793908-794179 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 109, 20

Conread position: 97-372
Cow position: chr15:7574668-7574939 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 155

Conread position: 160-370
Cow position: chr15:30811555-30811753 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 164
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 92

Conread position: 167-368
Cow position: chr15:2800994-2800798 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 93

Show alignments to all cow chromosomes.