Cow genome map
Conread name: | OvF2-UMC-pd0fol-009-c04 |
Conread position: | 1-266 |
Cow position: | chr15:44378293-44378558 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 188 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 246, 96 |
Conread position: | 1-362 |
Cow position: | chr15:47201796-47201454 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 263 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 61 |
Conread position: | 2-184 |
Cow position: | chr15:503085-503266 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 139 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 2-241 |
Cow position: | chr15:24969175-24968951 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 96 |
Conread position: | 2-259 |
Cow position: | chr15:17237114-17236842 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 91 |
Conread position: | 2-266 |
Cow position: | chr15:662153-661892 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 197 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 140, 95 |
Conread position: | 2-310 |
Cow position: | chr15:24048041-24048350 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 220 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 151, 99 |
Conread position: | 2-350 |
Cow position: | chr15:5983400-5983738 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 243 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 182, 101 |
Conread position: | 2-360 |
Cow position: | chr15:26157783-26158137 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 90 |
Conread position: | 2-363 |
Cow position: | chr15:51220515-51220867 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 254 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 180, 99 |
Conread position: | 2-364 |
Cow position: | chr15:23774076-23774419 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 95 |
Conread position: | 2-365 |
Cow position: | chr15:33229278-33228931 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 99 |
Conread position: | 2-366 |
Cow position: | chr15:313027-312674 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 251 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 183, 28 |
Conread position: | 2-366 |
Cow position: | chr15:13076293-13076644 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 180, 99 |
Conread position: | 2-366 |
Cow position: | chr15:20458099-20458455 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 240 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 173, 95 |
Conread position: | 2-368 |
Cow position: | chr15:1082210-1082564 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 260 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 184, 60 |
Conread position: | 2-368 |
Cow position: | chr15:1129218-1128864 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 264 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 184, 60 |
Conread position: | 2-368 |
Cow position: | chr15:4688805-4689160 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 80 |
Conread position: | 2-368 |
Cow position: | chr15:4788025-4787674 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 255 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 146, 43 |
Conread position: | 2-368 |
Cow position: | chr15:4829109-4829461 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 99 |
Conread position: | 2-368 |
Cow position: | chr15:6805486-6805840 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 257 |
Alignm E-value: | 7.00649e-45 |
Alignm gaps (pig, cow): | 143, 56 |
Conread position: | 2-368 |
Cow position: | chr15:7941199-7941544 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 254 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 146, 53 |
Conread position: | 2-368 |
Cow position: | chr15:10736341-10736692 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 94 |
Conread position: | 2-368 |
Cow position: | chr15:17267287-17267642 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 259 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 162, 99 |
Conread position: | 2-370 |
Cow position: | chr15:6281425-6281772 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 251 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 152, 49 |
Conread position: | 2-370 |
Cow position: | chr15:29341332-29340973 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 245, 76 |
Conread position: | 2-370 |
Cow position: | chr15:41359776-41360131 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 78 |
Conread position: | 2-372 |
Cow position: | chr15:35643678-35643330 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 261 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 211, 99 |
Conread position: | 3-368 |
Cow position: | chr15:4924932-4925276 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 249 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 3-368 |
Cow position: | chr15:30045172-30045534 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 94 |
Conread position: | 3-368 |
Cow position: | chr15:50344956-50344608 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 326, 98 |
Conread position: | 3-370 |
Cow position: | chr15:36356291-36355940 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 24 |
Conread position: | 4-340 |
Cow position: | chr15:4081776-4082101 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 230 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 186, 97 |
Conread position: | 4-368 |
Cow position: | chr15:25132732-25133089 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 259 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 156, 98 |
Conread position: | 5-349 |
Cow position: | chr15:4654244-4654595 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 243 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 185, 91 |
Conread position: | 14-328 |
Cow position: | chr15:21366834-21366523 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 214 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 29, 9 |
Conread position: | 14-350 |
Cow position: | chr15:1775946-1776271 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 241 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 163, 87 |
Conread position: | 14-365 |
Cow position: | chr15:32065504-32065165 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 250 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 57, 78 |
Conread position: | 14-366 |
Cow position: | chr15:37382804-37382464 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 87 |
Conread position: | 14-368 |
Cow position: | chr15:18019598-18019260 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 77 |
Conread position: | 14-368 |
Cow position: | chr15:38983446-38983801 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 87 |
Conread position: | 14-372 |
Cow position: | chr15:16787846-16787514 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 249 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 176, 60 |
Conread position: | 15-368 |
Cow position: | chr15:7271121-7271466 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 249 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 51, 89 |
Conread position: | 20-346 |
Cow position: | chr15:336476-336786 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 207 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 26-370 |
Cow position: | chr15:21911513-21911172 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 25 |
Conread position: | 31-368 |
Cow position: | chr15:13388544-13388222 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 30 |
Conread position: | 32-368 |
Cow position: | chr15:14756984-14757309 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 236 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 40, 47 |
Conread position: | 34-364 |
Cow position: | chr15:20352999-20352677 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 28, 69 |
Conread position: | 75-346 |
Cow position: | chr15:3653230-3652950 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 194 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 124, 26 |
Conread position: | 81-368 |
Cow position: | chr15:793908-794179 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 218 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 109, 20 |
Conread position: | 97-372 |
Cow position: | chr15:7574668-7574939 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 155 |
Conread position: | 160-370 |
Cow position: | chr15:30811555-30811753 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 164 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 30, 92 |
Conread position: | 167-368 |
Cow position: | chr15:2800994-2800798 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 145 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 93 |
Show alignments to all cow chromosomes.