Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 1-368 |
| Cow position: | chr16:25173670-25174018 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 100 |
| Conread position: | 2-172 |
| Cow position: | chr16:48495711-48495542 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 2-219 |
| Cow position: | chr16:42118177-42118377 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 2-234 |
| Cow position: | chr16:44127431-44127195 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 183, 94 |
| Conread position: | 2-350 |
| Cow position: | chr16:12244616-12244283 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 238 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 2-359 |
| Cow position: | chr16:5416843-5416502 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 67 |
| Conread position: | 2-362 |
| Cow position: | chr16:7457557-7457213 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-365 |
| Cow position: | chr16:25964336-25964679 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 245, 86 |
| Conread position: | 2-366 |
| Cow position: | chr16:5763271-5763636 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 99 |
| Conread position: | 2-366 |
| Cow position: | chr16:47018324-47017977 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-367 |
| Cow position: | chr16:44256698-44256358 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 2-368 |
| Cow position: | chr16:236921-237256 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 72 |
| Conread position: | 2-368 |
| Cow position: | chr16:1958294-1957947 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 180, 27 |
| Conread position: | 2-368 |
| Cow position: | chr16:15804731-15805086 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 116, 59 |
| Conread position: | 2-368 |
| Cow position: | chr16:23985738-23986092 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr16:25344403-25344758 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 108, 95 |
| Conread position: | 2-368 |
| Cow position: | chr16:31425475-31425838 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 102 |
| Conread position: | 2-368 |
| Cow position: | chr16:42074473-42074119 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 59 |
| Conread position: | 2-370 |
| Cow position: | chr16:24444866-24445233 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 100 |
| Conread position: | 2-370 |
| Cow position: | chr16:41575679-41576024 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 101 |
| Conread position: | 3-368 |
| Cow position: | chr16:41033726-41034079 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 187, 75 |
| Conread position: | 3-368 |
| Cow position: | chr16:51087210-51087562 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 98 |
| Conread position: | 3-370 |
| Cow position: | chr16:30052375-30052726 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 177, 75 |
| Conread position: | 4-372 |
| Cow position: | chr16:2394790-2395164 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 186, 35 |
| Conread position: | 14-350 |
| Cow position: | chr16:11054428-11054751 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 15, 21 |
| Conread position: | 15-360 |
| Cow position: | chr16:599863-600191 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 87 |
| Conread position: | 16-368 |
| Cow position: | chr16:7155044-7155379 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 13 |
| Conread position: | 21-368 |
| Cow position: | chr16:5833245-5833576 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 81 |
| Conread position: | 31-367 |
| Cow position: | chr16:27012856-27013175 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 71 |
| Conread position: | 31-370 |
| Cow position: | chr16:49142619-49142291 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 71 |
| Conread position: | 37-368 |
| Cow position: | chr16:23249495-23249176 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 153, 64 |
| Conread position: | 42-368 |
| Cow position: | chr16:37925518-37925206 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 40, 14 |
| Conread position: | 44-350 |
| Cow position: | chr16:23809988-23810279 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 149, 57 |
| Conread position: | 66-372 |
| Cow position: | chr16:49516295-49515998 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 91-368 |
| Cow position: | chr16:14029634-14029382 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 102-366 |
| Cow position: | chr16:44675877-44676131 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 88, 166 |
| Conread position: | 116-370 |
| Cow position: | chr16:48341669-48341428 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 27 |
| Conread position: | 162-368 |
| Cow position: | chr16:3632628-3632845 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 196 |
| Conread position: | 184-368 |
| Cow position: | chr16:4711976-4712151 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 190-370 |
| Cow position: | chr16:48955708-48955882 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 153, 59 |
Show alignments to all cow chromosomes.