Cow genome map
| Conread name: | OvF2-UMC-pd0fol-009-c04 |
| Conread position: | 1-368 |
| Cow position: | chr2:3839911-3840251 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 219, 56 |
| Conread position: | 2-254 |
| Cow position: | chr2:48360605-48360861 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 2-262 |
| Cow position: | chr2:32409587-32409337 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 2-360 |
| Cow position: | chr2:9688643-9688298 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 99 |
| Conread position: | 2-362 |
| Cow position: | chr2:15572404-15572062 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 2-368 |
| Cow position: | chr2:576215-576568 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 146, 99 |
| Conread position: | 2-368 |
| Cow position: | chr2:2018223-2018571 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 188, 99 |
| Conread position: | 2-368 |
| Cow position: | chr2:2591026-2590680 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 44 |
| Conread position: | 2-368 |
| Cow position: | chr2:8121354-8121710 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 158, 99 |
| Conread position: | 2-368 |
| Cow position: | chr2:13603020-13603370 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 2-368 |
| Cow position: | chr2:20917512-20917169 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 346, 14 |
| Conread position: | 2-368 |
| Cow position: | chr2:27357737-27358075 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 2-368 |
| Cow position: | chr2:31498891-31499237 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 76 |
| Conread position: | 2-368 |
| Cow position: | chr2:55481561-55481213 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 100 |
| Conread position: | 2-368 |
| Cow position: | chr2:60955290-60955636 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 2-368 |
| Cow position: | chr2:62675346-62674990 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 246 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 137, 64 |
| Conread position: | 2-368 |
| Cow position: | chr2:72931426-72931077 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 2-369 |
| Cow position: | chr2:19288656-19288305 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 95 |
| Conread position: | 2-370 |
| Cow position: | chr2:35949741-35949397 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 95 |
| Conread position: | 2-370 |
| Cow position: | chr2:36058783-36058431 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 49 |
| Conread position: | 2-372 |
| Cow position: | chr2:39116450-39116811 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 127, 100 |
| Conread position: | 3-234 |
| Cow position: | chr2:23492452-23492684 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 94 |
| Conread position: | 3-367 |
| Cow position: | chr2:54655687-54655339 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 98 |
| Conread position: | 3-368 |
| Cow position: | chr2:33251971-33251608 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 98 |
| Conread position: | 3-368 |
| Cow position: | chr2:52128661-52128322 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 187, 69 |
| Conread position: | 4-358 |
| Cow position: | chr2:29956410-29956074 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 4-358 |
| Cow position: | chr2:74761540-74761888 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 93, 252 |
| Conread position: | 4-362 |
| Cow position: | chr2:57054224-57054567 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 251 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 130, 69 |
| Conread position: | 4-368 |
| Cow position: | chr2:49474561-49474913 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 97 |
| Conread position: | 4-368 |
| Cow position: | chr2:72692438-72692788 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 188, 71 |
| Conread position: | 6-368 |
| Cow position: | chr2:50564975-50565325 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 95 |
| Conread position: | 14-342 |
| Cow position: | chr2:30816061-30815747 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 84, 42 |
| Conread position: | 14-362 |
| Cow position: | chr2:62683335-62683672 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 87 |
| Conread position: | 14-368 |
| Cow position: | chr2:4417384-4417050 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 176, 15 |
| Conread position: | 14-368 |
| Cow position: | chr2:5798133-5797793 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 25 |
| Conread position: | 16-368 |
| Cow position: | chr2:53497984-53497650 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 239 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 174, 55 |
| Conread position: | 16-368 |
| Cow position: | chr2:86348963-86349300 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 161, 23 |
| Conread position: | 20-344 |
| Cow position: | chr2:1426967-1426660 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 21 |
| Conread position: | 20-368 |
| Cow position: | chr2:20856918-20856584 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 81 |
| Conread position: | 21-368 |
| Cow position: | chr2:4923357-4923020 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 81 |
| Conread position: | 26-368 |
| Cow position: | chr2:17941370-17941039 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 27-370 |
| Cow position: | chr2:68489645-68489314 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 74 |
| Conread position: | 31-368 |
| Cow position: | chr2:6064799-6064477 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 156, 70 |
| Conread position: | 49-370 |
| Cow position: | chr2:40772618-40772934 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 14, 53 |
| Conread position: | 87-367 |
| Cow position: | chr2:21407216-21407483 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 103, 14 |
| Conread position: | 133-370 |
| Cow position: | chr2:27179157-27179383 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 178-368 |
| Cow position: | chr2:85739196-85739371 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 181-368 |
| Cow position: | chr2:9371004-9370832 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 185-368 |
| Cow position: | chr2:23271866-23271681 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 165 |
Show alignments to all cow chromosomes.